Mollisia scopiformis: LY89DRAFT_554531
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Entry
LY89DRAFT_554531 CDS
T04865
Name
(RefSeq) SNF5-domain-containing protein
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
psco
Mollisia scopiformis
Pathway
psco03082
ATP-dependent chromatin remodeling
psco03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
LY89DRAFT_554531
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
LY89DRAFT_554531
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psco01009
]
LY89DRAFT_554531
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psco03021
]
LY89DRAFT_554531
03036 Chromosome and associated proteins [BR:
psco03036
]
LY89DRAFT_554531
Protein phosphatases and associated proteins [BR:
psco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
LY89DRAFT_554531
Transcription machinery [BR:
psco03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
LY89DRAFT_554531
SWI/SNF complex
LY89DRAFT_554531
Chromosome and associated proteins [BR:
psco03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
LY89DRAFT_554531
PBAF complex
LY89DRAFT_554531
SWI/SNF complex
LY89DRAFT_554531
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
DUF3678
Motif
Other DBs
NCBI-GeneID:
28818075
NCBI-ProteinID:
XP_018073939
JGI:
554531
UniProt:
A0A194XHH6
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
ADASAPAPSSSSVLTHRQRTKEDFDKILLDTYVNRDLVHSSAITDDHDSRIAHYTHIRNE
LDDYKKVRSDYKVWFPPSRLYGEGYSGYGNGRTDGPTRLLYPQHKPRLGHRKTQRLRIKR
KELLQQAEQVEELVPIRLDIDWDKVRLRDTFTWNLHDRVVNTDLFAAQFIEDLGLAVPPA
NPVLDQVQQQIREQLNDFYPQVYIEEDALDPELPYSAYKNEEMRILIKLNITIGPTTLED
KFEWELNNPLNSPEEFAQSLSRELSLSGEFTTAIAHSIREQCQLFTRGLYVVGHPFDGRP
LEDADLIASFLPSPLPSVLRPQQQAKEFVPLLYEMSEADLERSEVIWSREQRRQKRSVNR
RGGPTLPDLKDRQRTVRTLIVSSVIPGAADSIEDSRLYKRVGGTAGRKRPGARDDDLSES
SESDDAAPESPAMANLLSGTARTRGMRGAATAAQQRMANIGRSETPEAAILHHHETRTSA
RRFGRDAREESMESSSMIVKLKIGKEKFKKLLRDLRSKDRPSNLTSTPSYTRATSALGTP
APGSMGPPSTPGVQNQTLQPSSTPAPQGQIGSVDAPPPPAPGQPVPAPPPPPAWLTSGLN
ALLTQYPNDRFEGVMRYSAVNTTTEAPTAQPPAGQPIPDNVKFMYLPRIRCQDCPGKLYT
PGPETTVGNFEVHLKNRQHRERVEARVASSSTGGS
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
gctgacgcctctgcgcctgctccctcttcctcttccgtcctaacacatcgccagcgtacg
aaagaagacttcgacaagattctcctcgacacatatgtgaatagagatctggtgcattcc
tcagcaatcacggatgaccatgacagtcgcatagcacattacacccacataaggaatgag
ctagatgattacaagaaggttcgctcggattacaaggtgtggtttcctcccagtcgactc
tatggtgaaggctacagtggctatggcaatgggagaacagacggtcctaccaggctgttg
tatcctcagcacaagcctaggcttggacaccggaagactcaaaggctccggatcaagcgc
aaggaattgttacaacaagctgagcaggtggaagagttggtgcctatacgactggatatt
gattgggacaaggtcagattacgagataccttcacatggaatctccacgatcgggtcgta
aatacagatctgtttgcagcgcaattcatagaggatcttggcttggcagtcccaccagca
aatcccgtcctcgaccaagtccagcagcaaatacgggaacaactgaacgatttctatcct
caagtctatatcgaggaagatgccttggaccctgagcttccgtattcggcgtacaagaac
gaagagatgcgtatacttatcaaattaaacataacaattgggcctacaactttggaggac
aagtttgaatgggaactgaacaatccactgaactcgcctgaagagtttgcccagagtctt
tcaagagaattatctttatcaggggagttcacaacagcaatcgcgcattctatacgggaa
caatgtcagctattcacaagaggcttgtacgttgtgggacacccattcgatgggcgaccg
ctagaggatgccgatttgattgcctcgttcctcccgtctccattaccatccgttcttcga
cctcagcagcaagccaaggaattcgtgccgctgttatacgaaatgagtgaagcagatttg
gagagaagtgaagtcatttggtcgagagaacagcgcagacagaaacgatcggtgaacagg
agaggagggccgacattgccggatctgaaggataggcagagaactgttcggactttgatc
gtatcttcggttatccctggtgccgcagattcgatagaagacagtcggttatacaaacgt
gtgggtggtacagctggaaggaagagacctggagcccgagacgatgatctttcagaatca
tcagaaagcgatgacgctgctcccgaatcacctgcgatggcgaacttgctctctggaacc
gcgagaacaagaggtatgagaggggcggcaacagcagcacaacaacgtatggcaaacatc
ggtaggtccgaaacgcctgaagcagcaatccttcatcatcatgaaacaagaacgtctgca
aggagattcggtcgtgatgctcgtgaggagagtatggaaagctctagcatgattgttaaa
ttgaagattggaaaggagaagttcaagaagttgttacgtgatttgaggtcaaaagataga
ccttcgaatttaacatctactccttcctacactcgggcaacttcagcattgggcactccg
gctccgggctccatggggcctccttcaacacctggggtgcaaaatcaaacactgcaacct
tcatcaacgccagcacctcaaggacaaattggaagtgttgacgcaccgcctcctcctgct
ccaggccagcctgttcccgcacctcctcctcccccagcatggctcacttcaggtctcaat
gctcttctaacacagtatcctaacgaccgtttcgagggtgtgatgcgatactctgccgta
aatacaacgacagaagcgcccacagcgcaaccaccagcaggccagcctatacccgataac
gtcaagttcatgtatctaccacggatacgctgtcaagactgtccagggaagttgtacact
cccggtcccgagacaactgttggcaacttcgaggtgcacctgaagaatcgacaacacaga
gaacgcgtcgaggctagggtagcttcgagttctactggaggaagc
DBGET
integrated database retrieval system
