KEGG   Mollisia scopiformis: LY89DRAFT_581783
Entry
LY89DRAFT_581783  CDS       T04865                                 
Name
(RefSeq) CAF1-domain-containing protein
  KO
K01148  poly(A)-specific ribonuclease [EC:3.1.13.4]
Organism
psco  Mollisia scopiformis
Pathway
psco03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LY89DRAFT_581783
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psco03019]
    LY89DRAFT_581783
Enzymes [BR:psco01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     LY89DRAFT_581783
Messenger RNA biogenesis [BR:psco03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     LY89DRAFT_581783
SSDB
Motif
Pfam: CAF1 RNase_T DNA_pol_A_exo1 Thioredoxin_9 PUS7L_N
Other DBs
NCBI-GeneID: 28818852
NCBI-ProteinID: XP_018073912
JGI: 581783
UniProt: A0A194XIG2
LinkDB
Position
Unknown
AA seq 544 aa
MDVGGAEFRSSLLRILRDISEATIVTFDLEMSGITTKPKCSAGDQSLNVGKPTLQNQYEE
MKSAAETYQVLQLGITCVSEDVDKEYYLAKPYNFTISPLQADGTGMGHSALRLNRNFTFS
SSASEFLAKNGFDFGKVFTAGVPYLSRDEEIELLEEYKQREGRKANIPDLVIGASDYMNL
EFVRSARKTVTVWFENPEHKDDFVNVSHPAGPLTGLQRRLVHQFIRSEFPTLRAFGLMDG
SFMQVRRIDLIQEQAYQARQAVTYKGNIAKQTGLRWIFEALCGGNLSGVDVKWFINELEV
KEAKTVKEELEMIIKDLKSKKRMIVGHNLFFDLGFLYKTFIGILPNNVKDFQEDINDLFP
FIIDTKYLATQSPGTQNPRSGLKELLAPFRKIHVPLIVLHEDHVQYGAEYGRDHEAGYDS
WMTAELFVKLAGQLSSESKDILDDESGSSGSDEFFSAPEEYLKEHRDSEGGAGLKSGPDL
IDFGEDVDAEEVKTEQWLPRMSSKFWKKYVNKLRVNSSEGGVCDLAERGEDRGVGGVRRK
LAQL
NT seq 1635 nt   +upstreamnt  +downstreamnt
atggatgtgggtggcgcggaattccgcagctctttgctgcgtattctcagagatatatcc
gaggccactattgtaaccttcgatctcgagatgagtggcattaccaccaagcccaagtgc
tcggcaggtgatcaatcactcaatgttggcaaacctaccttgcagaaccagtacgaagaa
atgaagagtgcagcagagacctaccaagttctacagttgggaatcacatgcgtttcagag
gatgttgacaaagaatattacctggcaaaaccttacaacttcaccataagccccttacag
gccgatggaactggaatgggtcactctgcattgagactcaaccgcaacttcactttctct
agcagcgcctctgagtttcttgctaagaatggctttgatttcggtaaggtcttcacggcc
ggcgttccatacttgtcgcgtgacgaggagattgagcttttggaggagtacaagcagcgc
gagggcagaaaggcaaatatccccgatcttgtgattggtgccagtgactatatgaacctg
gagttcgttcgttctgcacgaaagactgttaccgtttggttcgaaaacccggagcacaag
gatgactttgtcaatgtttcccatccagcaggacccttgactggcctacaacgcagattg
gttcatcaattcattcgcagcgagttccctacacttcgagcattcggtcttatggatggt
tctttcatgcaagtgagacgtattgatcttatccaagagcaagcataccaagcccgacaa
gccgttacctacaaaggcaacattgctaagcaaactggcttaagatggatcttcgaagca
ctgtgtggtggcaacctctctggggtcgacgtaaaatggttcatcaacgagttggaagtt
aaggaagccaagaccgtcaaagaggaactggagatgatcatcaaggatctcaagagcaag
aagcgcatgattgttgggcacaacctattcttcgacctcggcttcctatacaagaccttc
attggcattctaccgaacaacgtcaaagactttcaggaggatatcaacgatttgttcccc
tttatcatcgataccaaatacctcgccactcaaagtcccggaactcaaaatccacgcagc
ggtctcaaggagctgcttgcgcccttccgcaagatccatgtccctctcattgtactacac
gaggaccatgttcaatacggcgctgagtacggtagagatcatgaagctggatatgacagc
tggatgaccgccgagttgtttgtcaagctggccggacagctgtccagcgagtccaaggac
atcctggacgacgaatcaggttcttctggttcggacgagttcttctccgccccggaggag
tatttaaaggagcatcgcgactccgagggcggggcgggactcaagtccggaccggacttg
atcgactttggggaggacgtcgacgccgaagaggtgaagaccgagcaatggctcccaaga
atgtcgagcaagttctggaagaagtacgtcaacaagctccgagtcaactcgagcgagggc
ggggtttgtgacctggcggagcggggcgaggatcggggggttggtggtgtccgccgcaag
ctggcacaattgtag

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