KEGG   Mollisia scopiformis: LY89DRAFT_583400
Entry
LY89DRAFT_583400  CDS       T04865                                 
Name
(RefSeq) uncharacterized protein
  KO
K12589  exosome complex component RRP42
Organism
psco  Mollisia scopiformis
Pathway
psco03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LY89DRAFT_583400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psco03019]
    LY89DRAFT_583400
Messenger RNA biogenesis [BR:psco03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     LY89DRAFT_583400
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     LY89DRAFT_583400
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 28818937
NCBI-ProteinID: XP_018072475
JGI: 583400
UniProt: A0A194XD67
LinkDB
Position
Unknown
AA seq 355 aa
MAPSATQQVLLSPAELSYLHTSLSLTPPIRPDGRAPSQFRPLIAETGILPGTNGSARICF
ADGTEAIVGIKAEMEKSGTGYQQSNNLEEEDARQGSNDWLEVTVEVPGLRDDDSMPIFLA
AMLTEALLADGEFTKRLWINRRFHWKLYLDILLLSQALSYPLPLLSLTTHLALLSTRLPK
LTSELDEDPLFDDDWEASVYLYPRNSQASHTRPPVTLLVMAVKNNIIFDPSKEELAVAEV
VLAVSVGERASGEVDMEVDSKKTRDLRLLAVRTIDPPSRLTPPGIPNALNTATGGTAPTI
EQAASQREITQEEGVWQPPRGGAKRKLIAALIQKVLEHGGVAEEVLDGLDGVELG
NT seq 1068 nt   +upstreamnt  +downstreamnt
atggcgccatctgcgacacaacaggttcttctcagccctgcagagctttcctacctccat
acatctctttccctcaccccgccaattcgcccagatggtcgcgctcctagtcaatttcga
ccgctgatagcggagactggcatattaccgggcacaaatggaagtgcgaggatatgtttc
gcggacggtacagaagcaattgtggggatcaaggcggaaatggagaaatcggggacaggc
tatcaacagtcaaacaacctggaggaggaggatgctaggcaaggatcgaatgactggttg
gaggttacagttgaggttcctggtcttagagatgacgactcgatgcccattttcctggct
gcgatgttgacagaggcgttactcgctgatggagagtttacgaagcggttatggattaat
aggcggttccattggaagctatatttggatattctcttgctctcacaggcattgtcatat
ccactaccattactgtctcttaccacacatcttgcgctgctctctacgcggctaccaaag
ttgacttctgaactggacgaagatccactcttcgacgatgattgggaggcatctgtctac
ctgtaccctcgcaacagtcaggcttcgcatactcgtccaccagtaactctgcttgttatg
gccgtgaaaaacaacattatcttcgatccgagtaaagaggagcttgccgttgctgaagtg
gtacttgctgtatctgttggagagagggcgtctggagaggttgacatggaagtcgactct
aagaagacaagagatttgaggttactagcagtcaggacgatcgatccaccttccagattg
acgccacctggtattcctaatgcattgaacacggctactggaggtacagcaccaaccata
gagcaagcagcaagtcagagagagattacgcaagaagagggtgtatggcaaccaccaaga
ggcggtgcaaagcggaagctgattgctgctttgattcagaaagtgttagagcatggtggt
gtagcagaagaggtgttggacggcttagacggcgttgagttgggctag

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