Mollisia scopiformis: LY89DRAFT_583400
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Entry
LY89DRAFT_583400 CDS
T04865
Name
(RefSeq) uncharacterized protein
KO
K12589
exosome complex component RRP42
Organism
psco
Mollisia scopiformis
Pathway
psco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LY89DRAFT_583400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psco03019
]
LY89DRAFT_583400
Messenger RNA biogenesis [BR:
psco03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
LY89DRAFT_583400
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
LY89DRAFT_583400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
28818937
NCBI-ProteinID:
XP_018072475
JGI:
583400
UniProt:
A0A194XD67
LinkDB
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Position
Unknown
AA seq
355 aa
AA seq
DB search
MAPSATQQVLLSPAELSYLHTSLSLTPPIRPDGRAPSQFRPLIAETGILPGTNGSARICF
ADGTEAIVGIKAEMEKSGTGYQQSNNLEEEDARQGSNDWLEVTVEVPGLRDDDSMPIFLA
AMLTEALLADGEFTKRLWINRRFHWKLYLDILLLSQALSYPLPLLSLTTHLALLSTRLPK
LTSELDEDPLFDDDWEASVYLYPRNSQASHTRPPVTLLVMAVKNNIIFDPSKEELAVAEV
VLAVSVGERASGEVDMEVDSKKTRDLRLLAVRTIDPPSRLTPPGIPNALNTATGGTAPTI
EQAASQREITQEEGVWQPPRGGAKRKLIAALIQKVLEHGGVAEEVLDGLDGVELG
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggcgccatctgcgacacaacaggttcttctcagccctgcagagctttcctacctccat
acatctctttccctcaccccgccaattcgcccagatggtcgcgctcctagtcaatttcga
ccgctgatagcggagactggcatattaccgggcacaaatggaagtgcgaggatatgtttc
gcggacggtacagaagcaattgtggggatcaaggcggaaatggagaaatcggggacaggc
tatcaacagtcaaacaacctggaggaggaggatgctaggcaaggatcgaatgactggttg
gaggttacagttgaggttcctggtcttagagatgacgactcgatgcccattttcctggct
gcgatgttgacagaggcgttactcgctgatggagagtttacgaagcggttatggattaat
aggcggttccattggaagctatatttggatattctcttgctctcacaggcattgtcatat
ccactaccattactgtctcttaccacacatcttgcgctgctctctacgcggctaccaaag
ttgacttctgaactggacgaagatccactcttcgacgatgattgggaggcatctgtctac
ctgtaccctcgcaacagtcaggcttcgcatactcgtccaccagtaactctgcttgttatg
gccgtgaaaaacaacattatcttcgatccgagtaaagaggagcttgccgttgctgaagtg
gtacttgctgtatctgttggagagagggcgtctggagaggttgacatggaagtcgactct
aagaagacaagagatttgaggttactagcagtcaggacgatcgatccaccttccagattg
acgccacctggtattcctaatgcattgaacacggctactggaggtacagcaccaaccata
gagcaagcagcaagtcagagagagattacgcaagaagagggtgtatggcaaccaccaaga
ggcggtgcaaagcggaagctgattgctgctttgattcagaaagtgttagagcatggtggt
gtagcagaagaggtgttggacggcttagacggcgttgagttgggctag
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