Mollisia scopiformis: LY89DRAFT_592304
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Entry
LY89DRAFT_592304 CDS
T04865
Name
(RefSeq) TPR-like protein
KO
K15176
RNA polymerase-associated protein CTR9
Organism
psco
Mollisia scopiformis
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psco03021
]
LY89DRAFT_592304
Transcription machinery [BR:
psco03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
LY89DRAFT_592304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_19
TPR_12
TPR_14
TPR_11
TPR_16
TPR_CcmH_CycH
TPR_7
DUF2225
ANAPC3
TPR-S
Motif
Other DBs
NCBI-GeneID:
28819417
NCBI-ProteinID:
XP_018067080
JGI:
592304
UniProt:
A0A194WXR5
LinkDB
All DBs
Position
Unknown
AA seq
1218 aa
AA seq
DB search
MATATNGHVNGGTNGYAAVSPGHRVMSKRFSDIPSAIDIPVQGEDDDQAVEVDLEDLLDD
PTELCTLLENEGAARTYWMTVSLAYAKQKKVDHAIEMLQKGQTAMRGGQKEKLSMLTCLC
WMFLWKSRESPRVLPDDAASNLKTKEYWLQQSTSTLNEALRINPAFPPLFLARGVLQLLK
ASLQPPSKSASAGATDHEKQDMIRSSLRSFEDAIRVSQGRNIMAVLGKARANFSLGKYPE
ALEGYQDALHKMPDMVDPDPRIGIGCCFWQLGFKDDAKTAWERALEINPDSKIANILLGL
FYLDSSAHVPTNGPEFIRLYKKAMTEYTQKAFKADKDLPLTCATFAGYFLSRKSLPNVET
LAQKAIQYTDVNAIASDGWYLLARKEHYNDDYDKAADCYRRADEARGGADRGFLPAKFGV
AQLSVLKGDYGEAKLRLEKIIQNSKNVEAMALLGTLYAEEVFTVQQSGANTKEEKSPEYK
KAVGYLESVRTAWKDPKKNLIPDASVLLNLARLYETDQPDKSLQCLQQVEQIEFDQVPED
ERPKDPEEEATWRQRVREGLPPQLLNNMGCFFYQSEKFDQARDMFQSGLNACIKVGEKQE
DMDTDALVTTISYNLGRTYEANGMLDEAHNVYDGLLARHADYTDARTRLAYISLRQNPTD
EGPKAVVKLYNESSADLEVRALYGWYLGKVHSRKRGGNIAEDPELRHYKHTLQNYEKHDR
YALIGMGNLYLITAREMRRETDQEKQKRTNMYVKAVEFFDKALQLDPRNAYAAQGIAIAL
VEDKKDFKTALSIFIKVRETVKDPSVFVNLGHIFNELRQYSKAIEHYELALSKDRAHDAQ
ILACLGRTWLSKGKAEKSLQAFKNALDYSQKALEIASEQVHFKFNVAYVQLQLATTIYAL
PETQRTLAEVEAAAAGLEEAVASLDAISQHPQTPYPKHDVEQRANMARNTMRKQLERAVQ
AQREYEEKNAEKLQAAKQARETELRKREEARLAAEEAEKERKRAIAEERQKIAERDRELA
EARAEEDKAREAAELTTDSETGEKVKRKKKPRAAGTGGKRKKKNEDGITDDEDSGLDGKR
RSRGPRSGGESDEEKPKKKRRLAKKAATEKPNKYKSSEIVVESDSEGDDGAAAAAQEMND
DVGDEPAADMDVDAGSDEDETVAAPIKRKSRRTMIDSDDDDEDEPAAANGGSPEANGNAE
DGDTPMAEADNAADSDDE
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgcaacgaacggacacgttaatggtggaacaaatggctatgctgctgtctct
cctgggcatagggtgatgagcaaaagattctcagacatcccgtctgccatcgatattccc
gtgcagggcgaagatgacgatcaagctgtcgaagtcgatctcgaagacttgttggatgat
cctaccgaactatgtactcttctagagaacgaaggcgcggcgcgcacatactggatgacg
gtctctcttgcatacgccaagcaaaagaaggttgatcatgctatcgaaatgctgcagaag
ggacaaacagctatgcggggtggacagaaagagaaactcagcatgttgacttgcttatgc
tggatgttcctttggaagagcagggaatctccgcgagtcctcccagacgatgcggcgtca
aatttaaagacgaaggaatactggttacaacaatcgacttctacactcaatgaagcatta
cgaatcaatcctgctttccctcctctatttcttgcacgaggcgttcttcaattactcaaa
gcatccctacaaccgccctccaaatccgcttcagctggtgcgactgatcatgaaaagcaa
gatatgatccgttcatcactgaggtctttcgaagacgcaattcgagtatcccaaggcaga
aacataatggcggtcttgggaaaggcgagagcgaatttctctttgggcaaatatcctgag
gctttggaaggttaccaagatgctctgcacaagatgccagacatggtagacccggatccc
cgcattggaattggctgttgcttctggcagcttggattcaaggatgatgcaaagacggct
tgggagcgagctttggagatcaatccagactcgaagatcgcaaacatcctcctgggtctc
ttctacctcgattcgagcgcgcacgttcctaccaatgggcctgagttcattcggttatac
aagaaagcgatgacagaatacacacaaaaggcattcaaggccgacaaagatttgcctttg
acctgtgctacgtttgctgggtacttcttgtccagaaagtcattacctaatgttgagact
ctcgcccaaaaggccatccagtataccgatgtcaatgccattgcaagcgatggctggtac
ttgctggctcgaaaggaacattacaacgatgattacgataaggctgcagattgctatcga
agagctgatgaagctcggggtggtgctgatcgtggatttcttccagccaaatttggtgtt
gcgcaactttcggtactgaaaggtgattatggcgaagccaaattgagactcgagaaaatc
atccaaaattcgaagaatgtggaggcaatggcgctgcttggtaccctatatgctgaagag
gtctttaccgtccagcaaagtggtgcgaacacaaaagaggagaagtcacccgagtacaag
aaggcagtaggataccttgaaagcgttcgcactgcatggaaagatcctaagaagaatctc
atcccggacgcttcagtgctattgaatcttgcccgactctacgagaccgatcagcctgat
aagagcttgcaatgcttgcaacaagtagagcaaatagaatttgatcaggtccctgaggat
gaacgacccaaggatccagaggaagaagctacatggcggcagagagttcgggaaggtctc
cctcctcaactgttgaacaatatgggatgcttcttttaccagtcagagaagttcgatcaa
gcccgagacatgtttcaatcgggtttgaacgcttgcatcaaggtaggcgagaagcaagaa
gatatggatacagatgcgctcgtcacaaccatcagctataatcttggtcgtacatacgag
gccaatggaatgcttgacgaagcccacaatgtctatgatggacttctcgcccgtcacgcc
gattacacagatgcgcgaactcgacttgcatatatttctctgcgccaaaatcctacagac
gaaggtcctaaagcagtcgtgaagctctataacgagtcatctgcagatcttgaagtgcga
gccttgtacggttggtatctcggcaaagttcattctcggaagagaggtggcaatattgct
gaagatcccgaacttcgacactacaagcacacacttcagaactacgagaaacatgatcgt
tacgctttgattgggatgggaaatctctacctcattacagcccgtgagatgcgacgtgag
actgatcaagagaagcaaaagcgaacgaacatgtatgtcaaggctgttgagttctttgat
aaggctctacagctggatcccagaaatgcatatgctgcccagggaattgctattgcactc
gtcgaggataagaaggacttcaagacggcgttatctatcttcatcaaggttcgagaaacc
gtcaaagatcctagtgtattcgtcaatcttggtcacatcttcaatgaattacgacaatac
tcgaaggccattgagcattatgaactcgcgttgtcgaaggatcgagcacatgatgcccaa
attctggcttgtttggggcgaacttggctgtcaaagggaaaggcagagaagagtttgcaa
gcattcaagaatgctctcgactattcgcagaaggccttagagattgcttccgagcaagtt
cacttcaaattcaatgtggcttatgtgcagctgcaacttgcaaccactatctatgcacta
ccggagacacagcgtactctggcagaagttgaagccgctgctgctggactcgaggaggcc
gtggcttccctagatgctatttcccaacatcctcaaacaccttatcctaagcacgatgtc
gaacagcgagcaaacatggctcgaaataccatgcgaaagcagttggagcgtgctgttcaa
gctcagagagagtatgaagagaagaatgccgagaagcttcaggctgcaaagcaagctcga
gaaacagagctgagaaagcgtgaggaagcaagattagcggcagaggaagctgagaaggag
agaaagcgagccatcgcagaggagagacaaaagattgccgagcgagatcgtgagcttgca
gaggcaagagctgaggaagataaggccagagaggctgcagagctgactacggacagcgag
acaggcgaaaaagtcaagcggaagaagaagcctcgtgctgctggcacagggggcaaacgc
aagaagaagaacgaggacggtatcaccgacgacgaagacagtggtctcgatggcaagaga
cgaagccgtggtcctcgtagcggcggcgagagcgacgaagagaagccaaagaagaagaga
cgtcttgccaagaaagctgcaaccgagaagcccaacaaatacaagagtagcgaaattgtg
gttgagagcgatagcgaaggagatgatggcgctgctgcagcggcacaagaaatgaacgat
gatgttggtgatgagcctgcggccgatatggacgtcgatgctggaagcgatgaggatgag
actgttgctgcgccgatcaaacgcaagagcagacgaaccatgatcgattccgatgatgat
gacgaagatgagcctgcagctgcgaatgggggttcgcctgaagcaaacggcaacgccgag
gatggagatacaccgatggcagaggctgataacgcggcagactctgatgatgagtag
DBGET
integrated database retrieval system
