KEGG   Mollisia scopiformis: LY89DRAFT_604449
Entry
LY89DRAFT_604449  CDS       T04865                                 
Name
(RefSeq) putative U2 snRNP component prp10
  KO
K12828  splicing factor 3B subunit 1
Organism
psco  Mollisia scopiformis
Pathway
psco03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LY89DRAFT_604449
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:psco03041]
    LY89DRAFT_604449
   03036 Chromosome and associated proteins [BR:psco03036]
    LY89DRAFT_604449
Spliceosome [BR:psco03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    LY89DRAFT_604449
 Complex B
    LY89DRAFT_604449
 Complex C
   U2 SnRNP specific factors
    LY89DRAFT_604449
Chromosome and associated proteins [BR:psco03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    LY89DRAFT_604449
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT HEAT_EZ TOR1L1_N HEAT_EF3_N HEAT_2 HEAT HEAT_ECM29 Htt_N-HEAT_1 UTP20 XMAP215_CLASP_TOG mTOR_dom Adaptin_N UNC45-central
Other DBs
NCBI-GeneID: 28820083
NCBI-ProteinID: XP_018078427
JGI: 604449
UniProt: A0A194XWG8
LinkDB
Position
Unknown
AA seq 1228 aa
MSDADFETIRKLQAERNAASAGKKGSKTFDPSNQRTDVSTKASLTESFDTSLYERDGGDK
FAGYNTSIAVNDGNDDEEMEDTSRRLVGQYTASKEQINEFAHGNGFEEEDILLGREKSAR
IADRETDYQKRRLNRVLTPTRADPFAANRQAGAAEDGESYREIMARRDLEREEERVKRAI
EEKASNGEVTHHKPTLIKDGSGSPSDKENKEAGSTEVVTAGRKRKQRWDVASDATEVSTQ
PAEAKTKRSRWDQTPAIGGATVDDTPVSKRRSRWDQAPAATPIGNQGLVTPMHPSQMGGP
VMPTAFGTDISARNAPLSDEELDMMLPTEGYKILDPPPGYAPIRTAAQKIMATPTPAGGA
SGFGGFMMQDPESGRALGKQLPTEIPGVGDLQFFKAEDMAYFGKLTDGSDENTMSVEELK
ERKIMRLLLKVKNGTPPMRKTALRQLTDNARQFGAGPLFNQILPLLMEKTLEDQERHLLV
KVIDRVLYKLDELVRPYVHKILVVIEPLLIDQDYYARVEGREIISNLSKAAGLAHMISTM
RPDIDHVDEYVRNTTARAFAVVASALGIPALLPFLRAVCRSKKSWQARHTGCKIIQQIPI
LMGCAVLPHLKGLVDCIGPALNDEQAKVRTCVALALAALAEAANPYGIESFDDVLNPLWS
GSRKQRGKGLAGFLKAVGYIIPLMDEEYANYYTSQIMEILLREFSSPDEEMKKVVLKVVS
QCAGTDGVTAGYLKEHVLDEFFKSFWVRRMALDKRNYRQVVETTVDLGQKVGVGEIVERI
VNNLKDESEAYRKMTVETVEKVTASLGAADIGERLEERLIDGILHSFQEQSVEDIVMLNG
FGTVVNALGTRCKPYLPQIVSTILWRLNNKSATVRQQAADLISRIAMVMKQCGEDALMGK
LGVVLYEYLGEEYPEVLGSILGALRSIVTVVGISQMQPPIKDLLPRLTPILRNRHEKVQE
NTIDLVGRIADRGPESVNAREWMRICFELLDMLKAHKKGIRRAANNTFGFIAKAIGPQDV
LATLLNNLRVQERQSRVCTAVAIGIVAETCAPFTVLPALMNEYRVPELNVQNGVLKSLSF
LFEYIGEMAKDYVYAVTPLLEDALIDRDQVHRQTAASVTKHVALGVVGLGCEDAMIHLLN
LLWPNLFETSPHVIDRIIEAIDGIRMAIGPGLVLNYLFAGLFHPARKVRTAYWRIHNDMY
CHVADSMIPYYGPVGGEQIIRPELAIVI
NT seq 3687 nt   +upstreamnt  +downstreamnt
atgtctgacgccgactttgaaacgatcaggaagcttcaggcggagaggaatgccgcctct
gctggtaagaaggggtcaaagacgtttgatccatctaatcagcgaactgatgtctccacc
aaggcctccttgaccgaaagcttcgacacctccctatacgaacgtgacggtggcgataag
tttgctggatacaacacatctatcgcagtcaacgatggcaatgacgatgaggaaatggaa
gacaccagcaggcgcctggtaggccaatacacagcatcaaaggaacagatcaatgagttt
gcgcatggcaatgggtttgaagaagaagatattcttttgggccgcgagaagagcgcaaga
atagctgatcgagaaactgattaccaaaagcgaagactgaatcgtgtcctcacaccaacc
cgagcggacccattcgctgcgaataggcaggcaggcgcggctgaggatggcgaaagctat
cgggaaatcatggcgcggagggatctcgagagagaagaggagagagttaagagagctatc
gaggagaaggcatccaacggcgaagttacacatcacaagcctacgctgatcaaagatggt
agtggttctcctagcgataaagagaataaggaggcaggatccacggaagttgtcacagct
ggacgaaagagaaaacaacgatgggacgtcgcttctgacgccaccgaggtctctacacaa
cctgctgaagccaaaacaaagcgttcacgatgggatcagacacctgcaatcggaggcgct
actgttgatgacacgccggtgtctaaacgacgctcgagatgggatcaagcgccagcagca
acacctattggaaaccaaggtctcgttacgcctatgcacccctcacaaatgggaggacca
gtgatgcctaccgcatttgggacagatatatccgcccgcaatgcaccactatctgatgaa
gagcttgatatgatgctcccaacggaaggttacaagattctggatcccccgccaggatat
gcaccgatcagaacagcagcacagaagatcatggctactcctactcctgctggaggtgcc
tctggattcgggggcttcatgatgcaagatccagagagtggaagagcacttggtaagcaa
ctgccaactgagattcctggagttggagacctccaatttttcaaggccgaggacatggcc
tactttggaaagctcacagacggaagtgatgagaataccatgagtgtggaggaactcaag
gaacgaaagatcatgagactgctgctcaaggtgaagaacggaacaccacccatgcgaaag
actgctttacgtcagctcacagacaatgctcggcaatttggagctggaccccttttcaac
caaattcttcccttgctaatggaaaaaactttggaggaccaggagaggcatttactcgtc
aaagtcattgatcgtgttctttacaagcttgacgagcttgtccgaccttacgttcataag
attttggtcgtcattgagcctctgcttattgatcaggattattatgccagagttgaggga
cgagagattatctccaatctcagtaaagctgctggtctcgcacatatgatcagtactatg
cgtccagatattgatcacgttgacgagtatgttagaaacactactgcacgagcttttgca
gtcgtcgcttctgcactcggaattcccgcgctacttccattcttgagagctgtatgtcga
agcaagaagagttggcaagcaagacatacaggatgtaagatcattcagcaaattcctatc
ctgatgggctgtgcggtacttccacatctgaagggtttggtggactgcattggtccagca
ctcaacgacgaacaggcgaaagtcaggacttgtgtggctctggctcttgcagctttagct
gaagctgcaaatccatatggtattgagagcttcgatgatgtcctcaatccgttgtggagt
ggaagcagaaagcaacgtggaaagggtctcgcaggattcttgaaagctgtcggttacatt
attccactgatggacgaagaatatgcaaattactacaccagtcagatcatggaaattttg
ctgagagagttttcatcacctgacgaggagatgaagaaggtagtcctcaaggttgtgtcc
cagtgtgctggcacggatggtgttacggctgggtatttgaaagagcatgttctcgatgag
ttcttcaaaagtttctgggttcgacgaatggctctggacaagcgcaattatcgacaggtc
gtcgaaacaactgtggatcttggccagaaggtcggagttggcgagattgttgagaggatc
gtcaataacctcaaggatgaaagcgaggcgtacagaaagatgactgtcgagactgtcgag
aaagttactgctagtcttggagctgctgacattggtgagcgactggaagagcgcttgatc
gacggtattcttcattcgttccaggaacaaagcgttgaggacatcgtcatgctgaatgga
ttcggcactgtggtcaacgctttgggtacacgatgcaagccatacctgccgcaaattgtc
tccaccatcttgtggcgtctcaataacaagtctgctactgttcgacaacaggcggcagat
ttgatctcacgaatcgcaatggttatgaaacaatgtggagaggatgcgctgatgggcaaa
ttgggcgtggttctttatgaatatctaggagaagaatacccagaagttcttggctctatt
cttggtgccctgcgttcgattgttacggtcgtgggtattagccaaatgcaaccacccatc
aaggatcttttaccacgactaacgccaattctacgaaatcgacacgagaaggtgcaggag
aataccatcgacttggttgggcgtattgctgatcgtggtcccgaaagtgtcaatgcaaga
gagtggatgagaatctgcttcgaattgcttgacatgttgaaggctcataagaagggtatc
cgaagagcagcaaataacacgtttggtttcattgctaaggctataggaccgcaggatgtt
ttggctacgctactgaacaatctgcgagtacaagaacgtcaatctcgagtttgtactgca
gttgccattggtatcgttgctgagacttgcgcacctttcaccgtcttaccagccttgatg
aatgagtatcgggtgcctgaactcaacgttcagaacggtgtcctaaaatcgttgtccttc
ctatttgagtatatcggcgagatggcaaaagactacgtttatgccgtcactccattactt
gaagatgcactcatcgacagagaccaagtccatagacaaactgctgctagtgttaccaag
catgttgcactcggtgttgttggacttggttgcgaggatgccatgatccatctcctcaac
ttgttatggcccaaccttttcgagaccagtccccatgtcattgaccgaatcatcgaagca
attgatggcattcgaatggctatcggcccaggactcgtccttaattatctcttcgcagga
ctgttccacccagcacgtaaggttcgaaccgcgtactggagaattcacaacgacatgtac
tgccatgtagcagattcgatgatcccttattatggacctgttgggggcgagcagattatc
cgaccagaactggcaattgttatatag

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