Mollisia scopiformis: LY89DRAFT_618036
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Entry
LY89DRAFT_618036 CDS
T04865
Name
(RefSeq) transcription elongation factor Spt6
KO
K11292
transcription elongation factor SPT6
Organism
psco
Mollisia scopiformis
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psco03021
]
LY89DRAFT_618036
03036 Chromosome and associated proteins [BR:
psco03036
]
LY89DRAFT_618036
Transcription machinery [BR:
psco03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
LY89DRAFT_618036
Chromosome and associated proteins [BR:
psco03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
LY89DRAFT_618036
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HTH_44
HHH_7
YqgF
Spt6_S1
SPT6_acidic
Tex_central_region
HHH_9
HHH_3
B12-binding
S1
Motif
Other DBs
NCBI-GeneID:
28820550
NCBI-ProteinID:
XP_018069956
JGI:
618036
UniProt:
A0A194X5Z2
LinkDB
All DBs
Position
Unknown
AA seq
1411 aa
AA seq
DB search
MSMRDLINGEAELDDEENDESFDEETGEPKPRKQRLNGELDDSSEEEDDDDDEEAARAVR
EGFIIEDDEDEEAEARERRRRKKRNRAEREQEEAVLDEEDLDLIGEANPEWERKTAAQPK
LKRLKRGHRDDGDQHRERGLDEIFSEDEELDAGHDLDRGYARPDHHRVDEFADFIEEDDL
EDEDERQRHQEEMEVARPRERGYVGGTEVSGLDKDALEDMEAIFGNGEDYDWALALEDEA
EVREAGDHNLELKDVFEPSQLSEKLLTDEDNLIRWADEPERFQLDRLPYKNLTFTDEQSR
EESRWITSLIWPKKQLHSDLQTSFTRAIGKVLEFFVVDEVEVPYVFQHRKDYLIHAIKTR
VRDSNPADTEEYHVNAEKLLNQDDLWRILELDLKFRALVEKRNVLEKTFDNLKLAAGIDD
PVVDAMLPIAQTMEELQDVQDYIYFHYSSEIKDVAATNGDAKEKRRPGGKTSIYDRIRKS
KAYDLVKAYGISPDRVAQNALREARKEYTEDAPLSPIDLADSLISDSDFNTGEQVLLAAR
QMFAEELFNNPRMRKHFRMGYYMMGVVNCQRTEKGLRKIDEQHPYYELKYLKNQTFNDIA
NKPEIFLKMLKAEEEGLLEVKVVMQNEREFRKQLFTEFSSENYSELADAWNDERQKVLDL
AFSKLERIITKGVKESMRTECQDSILKICREEYSKKLDQAPYKPHGMVLGTVPRVLALSN
GKSDPSRDAVNWAWVEEDGRVLENGRFDRLTRDEKSREDFVELVQRRKPDVIGVSGFCVD
THKLVTSLRDLVAEKGLRGAEFEDPDTGDDSSAPLEIVVVNDEVARLYKDSPRASIEHPT
FTSLTKYCVALAKYLQNPLKEYAALGKDIVSLSFHPCQQLLPEEKLRKQLETAMVDMVNL
CGVDINEAIGDPYTAALLPYICGLGPRKATAVLKTINANGGVVNTRDELVGDPDSGKLPV
VGPRVWNNCASFLSIEYDSSNPTSDYLDNTRVHPEDYELGRKMAADALELDEEDVKAEVD
EGGPGAIVRKLIKDDEQEKVNDLILEEYAEQLERNYNQRKRATLETIRAELQLPYEELRR
GFVTLTSNEIFTMLSGETRDQLCEGMIVSVNIRLAKDDFVIVKLDSGMEGRVELQDGSDS
DIPLSRLFAQGQTAQAKILDLDRTNFTARLALRESALRQNYKKRVEHEPGSWDVVQEHKD
KEELREKDKATGRTQRVVKHPLFKPFNSTQAEEFLGSQAVGDAVIRPSSKGNDHLAVTWK
VADGVYQHLDVLELQKENEFSVGRQLRIANKFNYSDLDELIVDHVKAMAKKVDEMTQHEK
FQSGSKADTERWLTTYTEANPKRSVYAFCLDTRHPGYFWLCFKAGQAAKPQAWQVRVVPN
AYELLKSPYPDMKALCNGFKMRHSQGESRRH
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgcgcgatctgatcaacggggaggccgagctcgacgacgaggagaatgatgag
tccttcgacgaagagactggggagccgaagcctaggaagcagcgactcaatggagaactc
gatgattccagcgaggaagaagatgatgacgacgatgaggaggctgctcgtgcggtacgc
gagggcttcattatagaggatgatgaggatgaagaagctgaggccagagaacgccgtcgc
cgaaagaagcgcaatcgagccgaacgcgagcaggaggaggccgttttggatgaagaggat
ttggatttgattggagaagccaacccagagtgggagcgcaagacagcagcacagccaaaa
ctcaagcgactcaagcgcggccaccgtgacgatggggaccagcaccgagagcgtggcctc
gacgagatcttctccgaggacgaggaacttgatgctgggcatgacctggatcgcgggtat
gcacgacctgaccatcacagagttgacgaatttgccgacttcatcgaagaagacgatctc
gaagatgaggacgagaggcagagacatcaagaggagatggaggtggctcgaccacgcgag
cgaggctacgttggaggaactgaagtcagtgggctggataaggatgcgttggaagatatg
gaggccatcttcgggaacggtgaagactatgactgggcacttgcactggaggatgaggct
gaagtcagagaggctggggaccacaatctggaattgaaggacgtcttcgagccttctcaa
ctttcagagaagcttctcaccgacgaggacaatctgatacgatgggctgacgagccggag
cggttccagttggataggctgccgtacaagaaccttactttcacggatgagcaatccaga
gaggaatctcgatggatcacaagtctcatatggccgaagaagcaacttcatagcgatctg
caaacatccttcactcgagctattggtaaagtcttggagttcttcgttgtggatgaggtc
gaggttccctacgtgttccagcaccgcaaggactacctgatccatgcaatcaagacacga
gttcgcgattccaacccagccgacaccgaggagtatcacgtcaatgctgaaaagctcttg
aatcaagatgatctttggaggattctggagcttgatctgaagttccgagctcttgtcgaa
aagagaaacgtcctcgagaagacattcgacaacctgaaattagcggccggaatcgacgat
ccagtggtagatgccatgcttccaattgcccaaactatggaggagctacaggatgtccaa
gattacatctacttccactattcatcagagatcaaagacgtggcggctacgaatggtgat
gccaaggagaaacgacgtccgggcggaaagacatcaatctacgatcgcatcagaaagagt
aaggcgtacgaccttgtcaaggcttacggcatatcacctgatcgagtggcccagaatgct
ttacgagaggctagaaaggagtacactgaagatgcaccactctccccaatcgaccttgcg
gattctttgattagcgatagcgactttaacactggtgagcaggttttgctggccgcccgt
caaatgtttgctgaagagctattcaacaacccgcgcatgcgaaagcatttccggatgggc
tactacatgatgggcgtcgtcaattgtcaacggacagaaaaaggtctgcgaaagattgat
gagcaacatccgtactacgaattgaaatacctcaagaaccaaacgttcaacgacatcgct
aacaagcctgaaatctttttgaagatgctgaaggctgaagaagaaggcctcctcgaagtc
aaggtagtgatgcagaatgagcgcgaattccgcaaacagttgttcacggaattttcttcg
gagaattatagcgagttggcagatgcctggaatgatgagcgccagaaagttctcgacttg
gcattttcgaagcttgaacgtatcatcacaaaaggcgtcaaggagagcatgagaactgaa
tgtcaagactcgattctcaagatttgccgcgaagagtattcgaaaaagctagatcaagct
ccatataagcctcatggcatggttctgggtacagttcctcgcgtcttagcactgtccaac
ggcaaaagtgatccaagcagggatgcggtaaactgggcttgggtggaggaagatgggcga
gtcttggagaatggacgcttcgacagattgactagagatgagaagtcgagggaggacttc
gtagagctggtgcagagaaggaagccagacgtaattggtgtcagtggattttgtgtcgat
actcacaagctggtcaccagtcttcgtgatttggtggcagaaaagggcttgagaggagct
gagtttgaggatccagacacaggcgacgactcgagcgccccactggagattgtcgtcgtc
aatgatgaggttgcgcgcctctacaaagacagtccacgagcatctattgagcacccgacc
ttcacctctctaacgaagtattgtgtagcgttggcgaaataccttcaaaacccactcaag
gagtatgcggcgcttggaaaggatatcgtctctctgtccttccatccctgtcaacaactt
cttccagaagaaaagcttcgcaagcagctcgagacagcaatggttgacatggtcaatcta
tgtggggttgatatcaacgaagcaattggcgatccctatacagctgcactgctaccgtat
atctgtggacttgggccacgaaaggcaactgcagtactcaagaccatcaacgctaatggt
ggtgttgtcaatacacgcgatgagcttgtgggtgatccggacagtggcaagctaccagtt
gtaggtccaagagtgtggaacaattgcgcgagtttcttgtctattgaatacgatagctcc
aatccaacttcggactatctcgacaatactcgagtgcaccccgaggactacgagctgggt
cgaaagatggccgctgatgctctagaactggacgaagaagacgtgaaggcggaggtcgac
gagggtggtccaggtgctattgtacgaaagctcatcaaggacgacgagcaagagaaggtc
aacgatctcattctggaagaatacgccgagcaattggagcgtaactataaccaacgaaag
cgtgcaacactggagaccattcgagccgaattgcagctgccatacgaagagttgagaaga
ggatttgtcaccttgaccagcaacgagatattcacaatgctctcaggagagacgcgtgat
cagctctgtgaggggatgatcgtctcggtcaatataagactcgctaaggacgactttgtc
attgtgaagcttgactcgggcatggaaggccgggttgagttgcaagacggttctgatagt
gatatcccacttagccgacttttcgcccaaggacaaaccgcccaagccaagattcttgac
cttgatcgtaccaacttcactgcgaggttggctttgcgtgagtcggcgttgagacaaaac
tataagaagcgcgtagagcacgaacccggttcatgggatgtagttcaggaacataaggat
aaggaggaacttcgcgagaaggataaggcgacgggtcgcacccaaagagtcgtcaagcat
cctctcttcaagccattcaactccacacaggccgaagaatttttggggtctcaagcggtt
ggcgatgctgtcatccgaccatcatccaaaggcaacgaccatttagcagtcacttggaag
gtcgccgatggagtatatcagcatcttgatgtcctcgagctgcagaaagagaacgagttc
tctgttgggcgacaactacggatcgctaacaagttcaactacagtgatctcgatgaactg
attgtagaccatgtcaaggctatggccaagaaagtggatgagatgacgcagcatgaaaag
ttccagtcgggcagcaaagccgacacagaacgatggttgactacctacacggaagctaat
cccaagagatctgtctacgctttctgcctcgacacgcgacacccagggtatttctggctg
tgcttcaaggctggccaggctgccaaacctcaagcatggcaagtccgcgttgtccccaat
gcatacgagctgttgaagagcccgtaccctgacatgaaggctttgtgcaatggattcaag
atgcgccattcgcagggtgagtcgcggagacactga
DBGET
integrated database retrieval system
