KEGG   Mollisia scopiformis: LY89DRAFT_618051
Entry
LY89DRAFT_618051  CDS       T04865                                 
Name
(RefSeq) uncharacterized protein
  KO
K03679  exosome complex component RRP4
Organism
psco  Mollisia scopiformis
Pathway
psco03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LY89DRAFT_618051
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psco03019]
    LY89DRAFT_618051
Messenger RNA biogenesis [BR:psco03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     LY89DRAFT_618051
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     LY89DRAFT_618051
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 RRP40_S1 ECR1_N_2 DUF6496
Other DBs
NCBI-GeneID: 28820552
NCBI-ProteinID: XP_018069965
JGI: 618051
UniProt: A0A194X5Z9
LinkDB
Position
Unknown
AA seq 341 aa
MTITILAPAPAVPYHTTDVSDDEDHEDGGVDLEGDSSMRPAKRARRSSAKDLVTPGETVT
DDPQWMRGHGTYIAPASTEIIATVAGTVQKTNKLLSVRPLRARYTPEIGDLVVGRIIEVQ
PKRWRVDVGAPHLAGLPLSAINLPGGILRKRTETDELQIRTFFSEGDLLVAEVQSLHQDG
SATLHTRSLKYGKLRNGVFMSVSGTGGRGGVVRSRRQVWTIDTIRGGGKVDVILGVNGYI
WISTHIEVEEGDTAITRIEESISSTVYSSQNDEISPETRREIARIRGVINLLVEEGLNVD
EDMVMKAYEAATLVEEDDASENIVYLGGEMGKRVVLMLGGP
NT seq 1026 nt   +upstreamnt  +downstreamnt
atgaccataactattcttgctccagctccggctgtcccgtatcacaccacggatgtgtca
gatgatgaagaccatgaagatggcggagttgatttggagggtgattccagcatgcgacct
gcgaagcgtgctcgacgcagctctgcgaaagacctcgtcactcctggagagacagtcacc
gatgatcctcaatggatgagaggccatggtacatatattgcccctgcaagcacggagatc
attgcgacagtagcaggcacagtccagaagaccaacaaacttctctctgttcgaccactt
cgcgcacgatacacacccgagattggtgatctggtcgtaggacgtatcatcgaagtccaa
cccaaacggtggcgagtggatgttggagctccgcacttggctggcctgcctctctcagct
atcaatctacctggtggtattctacgaaagagaacagagacggatgaactacaaatcaga
actttcttctcagaaggagatttgttggtggccgaagtgcaatctctacatcaggatgga
agcgctactttgcatacccgcagtctgaagtatggcaagttaaggaatggagtcttcatg
agtgtgagcggaactggcggaagaggaggtgtggttaggtcgagaagacaagtatggact
attgatacgatacggggtggagggaaggtcgatgtcattctcggagtcaatgggtatatt
tggatcagcacacatattgaagttgaagaaggcgacacggctattacgaggatagaagag
agtatcagcagtacggtctactcgagccagaatgacgagatatcaccggaaaccaggaga
gaaattgcgaggatacgaggggtcattaatttgttggtggaagaaggccttaatgttgat
gaagatatggttatgaaggcctatgaagctgctactctcgtcgaggaagatgatgcgagc
gagaacattgtatacttgggaggagagatgggcaagagagtcgtgttgatgttgggtgga
ccatag

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