Mollisia scopiformis: LY89DRAFT_622675
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Entry
LY89DRAFT_622675 CDS
T04865
Name
(RefSeq) putative chromatin structure-remodeling complex subunit snf21
KO
K11786
ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
Organism
psco
Mollisia scopiformis
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psco03021
]
LY89DRAFT_622675
03036 Chromosome and associated proteins [BR:
psco03036
]
LY89DRAFT_622675
Transcription machinery [BR:
psco03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
LY89DRAFT_622675
RSC complex
LY89DRAFT_622675
Chromosome and associated proteins [BR:
psco03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
LY89DRAFT_622675
SWI/SNF complex
LY89DRAFT_622675
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
Bromodomain
SnAC
ResIII
QLQ
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
28820710
NCBI-ProteinID:
XP_018067081
JGI:
622675
UniProt:
A0A194WXL7
LinkDB
All DBs
Position
Unknown
AA seq
1418 aa
AA seq
DB search
MATVAPAVQQPGSAMPQNPQEMKITLQKYKQMKESGVSDKDPEFQRVYQILQSMQHQRAY
QQQRAQFAQQQQQQQQQQMLNQQQNATTSAPNGANGTRTAQAPTSLPNTQALTTTSLGPS
AIPATANAPGLQKGGVTRTTAAGSGYFTQAQLSILKHQIFAFKCLSKNMGIPAATQEQLF
AAPKKSPITEQSLEASSAKVDDATPTINGNVEKKTVPKQHEYTGFKPPHANLPSKISYSL
HKVREKRPLIPSTVPSGVNLEKIRQERENIIYNRMQARLQELRSIPANIAHLDVRSDVLA
PEDTLKRKALIEMKMLGLFQKQRNMRERIGRQMIQYDNLAMTANRSHYRRMKKQSLREAR
ITEKLEKQQRDARETREKKKHTDYLQTVINHSREINTAGHNQRQKMQKLGRMMMAQHQNI
EKEEQKRIERTAKQRLQALKSNDEEAYLKLLDQAKDTRITHLLRQTDGFLSQLASSVKEQ
QRKAAERYGDNADDFIDDESDEDEEEEQDTRKIDYYAVAHRIKEEVNVQPSILVGGTLKE
YQLKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEAKKQNGPFLVIVPLSTLT
NWTLEFEKWAPSISKVVYKGNPMARKQQQQQIRYGNFQVLLTTYEYIIKDRPVLSKIKWI
HMIIDEGHRMKNSSSKLSATLTQYYSTRYRLILTGTPLQNNLPELWALLNFVLPTIFKSV
KSFDEWFNTPFANTGGQDKMELTEEEQILVIRRLHKVLRPFLLRRLKKDVEKDLPDKTEK
VIKCKFSSLQARLYKQMVTHNKLVVSDGKGGKTGARGLSNMIMQLRKLCNHPFVFDEVEN
QMNPTSTSNDLLWRTAGKFELLDRVLPKYQRTGHRVLMFFQMTAIMDIMEDFLRYRGIQF
LRLDGTTKSDDRSDLLREFNAPNSPYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQD
LQAQDRAHRIGQKNEVRILRLISSNSVEEKILERAKYKLDMDGKVIQAGRFDNKSSETDR
DAMLRVMLETADAAETLEQEEMDDEDLNMILARSDEELAIFQQMDEQRAKDPVYGNGPGS
KRVPRLMAENELPEIYMSDGNPISDEPEEIKGRGARERTRVKYDDGLTEEQWLNAVDDDE
DSPEAAAARKQARKDRREQNRLKRLGQLPGSIENSPEGSRASTEEPEPTPKKNKARKGAK
DKRKAEEVDDEPPAKRKRGPAGRPSKGAATNGDSVSPKHRATLQTSLRSIYEGLMALTSD
SDAGSDDDSSSAGPRQIIGPFVKLVPKKDFPDYYIIIQQPISMAEIDKKIKKEQYSSLSD
MKRDVRQLCANAKQYNEDGSMIFLDAVTIENACDSLIRDELNEHPELGDVDDSSRNGGST
APGTSAGTPIASSTKLKLTFNSSQQANGGGSGAQSDDD
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgttgcgccagctgttcaacagccgggctctgcgatgccccagaatccacaa
gagatgaagataactctgcagaaatacaagcagatgaaggaatctggcgtctcggataag
gatcccgaatttcaaagagtctatcaaatactccagagcatgcagcatcaacgagcatac
caacaacagagagcccagttcgcccaacagcagcagcaacagcagcaacagcagatgctc
aaccaacagcaaaatgctaccacttctgctccaaatggcgcgaatggcacacgtactgcc
caagctccgacttccctgcctaatacacaagccttgacgacgacatcattgggcccatct
gctatcccagcgacggcgaatgctccaggcttgcaaaagggtggcgtcactcgcacaaca
gcagccggaagtggatacttcacacaagcacaattgagtatcctcaagcaccagatattt
gcgttcaagtgcctgtcgaagaacatgggtattccagctgctacacaagaacagctcttt
gcggctcccaagaagtctccaattacggaacagtccctcgaagcttcgtctgcgaaggtt
gatgatgccaccccaactataaatggtaacgtagaaaagaaaactgttccgaagcagcac
gagtatactggattcaagccacctcatgcgaatctaccatcaaagatcagctattctctt
cacaaggttcgagagaagcgacccttgattcctagcactgtcccttctggcgtcaaccta
gagaagatccgacaagaacgagaaaacatcatctacaatcgtatgcaagctagattgcaa
gagctacgctctatacccgctaatattgctcaccttgatgtgcggagcgatgttcttgct
ccagaagatacactgaagcgtaaggccctgattgagatgaagatgctagggttattccaa
aagcaacgaaatatgcgggagaggatcggccgtcaaatgattcaatacgacaatcttgca
atgactgccaatcgaagtcattatcgtcgtatgaagaagcagtcgttgagagaagcccgt
atcaccgagaagcttgagaagcaacaacgcgatgctcgggagacccgcgaaaagaagaag
cataccgattacctccagacagtcatcaaccactctcgggaaatcaacacggctggacac
aaccaaagacagaagatgcagaagctgggtaggatgatgatggctcaacaccagaacatc
gaaaaggaagagcagaagcgaattgaacgaactgccaagcagcgtctccaggccttgaag
tcgaacgacgaagaagcctatctcaaattgctcgatcaagccaaggatactcggattact
cacttgcttcgacagacagatggcttcttgtcccagctcgcctcttccgtcaaggaacaa
caacgaaaggctgccgagcgttatggtgacaatgccgacgacttcattgatgatgaatct
gatgaagacgaagaggaggagcaagatactcgaaagattgattactacgctgttgcgcat
cgtatcaaagaggaggtcaatgttcagccatcgatattggttggtggtacattgaaggag
taccagttgaagggtctccagtggatgatttcgctctacaacaacaacctcaacggtatt
cttgcagacgagatgggtctcggcaagaccattcagacaatcagtttaattacctacctc
atcgaagcgaagaagcagaatggacccttccttgtcattgtacctctcagtaccctgaca
aattggactttggagtttgagaagtgggcaccatccatttcgaaggtggtctacaaggga
aacccaatggctcgaaagcagcaacaacagcagatccgttacggcaacttccaggtactc
ctaacaacctacgaatatatcatcaaggacaggcctgttctcagcaaaatcaaatggatt
cacatgatcattgacgaaggtcaccgcatgaagaattcatcgtccaagcttagtgccacc
ctcactcagtactacagcaccagataccgtcttattcttaccggaactccgttgcagaac
aaccttcccgaattgtgggctctccttaatttcgtccttccgactatcttcaaatccgtg
aaatctttcgatgagtggttcaacacaccgttcgcgaataccggtggtcaagacaagatg
gagttgactgaagaagaacaaattctcgtcattcgacgtttgcacaaggttttgcgacca
ttcttgcttcgtcgtcttaagaaggatgtcgagaaggatttgcctgataagaccgagaaa
gttatcaagtgcaaattctcctcccttcaagctcgtctctacaagcaaatggttacccac
aacaagctcgttgtcagcgatggcaagggtggaaagactggtgctcgtggtctcagcaat
atgatcatgcagttgcgaaagctttgcaaccatccctttgtcttcgacgaagttgagaac
cagatgaacccgacaagcactagcaacgacttgttatggcgaacagcaggtaaatttgag
ctgttggatcgggttctgcccaaatatcaacgtactggtcacagagtcttgatgttcttc
cagatgactgccatcatggacatcatggaggacttcctgcgctatcgtggtattcaattc
ctgcgattggatggaactacaaagtctgacgatcgttctgatctgcttcgcgaattcaac
gctcctaactcgccatacttcatgttcttgctctcgactcgtgcaggtggtctaggtctt
aatttgcagactgctgatacggttatcatctacgactccgattggaatcctcatcaagat
ttgcaagctcaggatcgtgctcatcgtatcggtcaaaagaacgaagtccgtattttgaga
cttatcagctctaattctgtagaagaaaagatcctcgagcgtgccaaatataagctggat
atggatggcaaggttatccaagctggtcgtttcgataacaaatcatctgaaactgatcgt
gacgctatgcttcgagtcatgttggaaaccgcggatgctgccgagaccttagagcaagaa
gagatggacgacgaggatctcaacatgatcttagcccgttcagacgaggagcttgctatc
ttccagcaaatggatgaacaaagagccaaggatcccgtttatggaaatgggcctggctcc
aagcgtgttccccgtctcatggccgagaatgaacttcccgagatatatatgtccgatggc
aatcctatttccgacgaacctgaagaaatcaagggccgtggtgctcgtgagcgaactcgt
gtcaagtatgatgatggtcttaccgaggaacaatggctcaatgctgtggacgacgatgag
gacagtccggaagccgcagctgcccgtaagcaagcacgaaaggaccgccgtgagcagaat
cgtctgaagagacttggtcagctaccaggctcaatcgagaactcgcctgagggtagtcgt
gcgagtacagaagagccagaacctacaccgaagaagaacaaggctcgcaagggtgcaaaa
gacaaacgcaaggctgaagaagtcgacgacgaaccacctgctaagcgaaagcgtggacct
gctggtcgaccaagcaagggagctgcgactaacggtgattccgtgagtcccaagcaccga
gccactcttcaaacaagcttgcgaagtatctacgagggtctcatggcgttaacgtctgac
tctgatgctggttcggatgatgattcttcctcagctgggcctcgacagatcattggaccg
tttgtgaagctcgtacccaagaaagatttcccggattattacatcattatccagcaacca
atttcgatggcagaaatcgacaagaagattaagaaagagcagtattctagcctttctgac
atgaagcgagacgttcgtcaactttgcgccaatgcaaagcaatacaacgaagacggcagc
atgatcttcctggatgccgtcacgattgagaatgcgtgtgattcactgatccgcgacgag
ttaaatgagcatcctgaactcggcgatgtcgacgattcatctcgaaatggaggttccacc
gctcctggaaccagcgctggaactcccatcgcatccagtacgaaactgaagctcacattc
aacagctctcaacaagcaaatggtggcggtagcggtgctcagagcgatgatgactaa
DBGET
integrated database retrieval system
