Mollisia scopiformis: LY89DRAFT_623334
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Entry
LY89DRAFT_623334 CDS
T04865
Name
(RefSeq) multidrug efflux transporter AcrB transmembrane domain-containing protein
KO
K12385
Niemann-Pick C1 protein
Organism
psco
Mollisia scopiformis
Pathway
psco04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
LY89DRAFT_623334
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
LY89DRAFT_623334
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psco02000
]
LY89DRAFT_623334
Transporters [BR:
psco02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
LY89DRAFT_623334
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_N
Sterol-sensing
NPC1_MLD
Patched
Folate_rec
MMPL
Motif
Other DBs
NCBI-GeneID:
28820738
NCBI-ProteinID:
XP_018066609
JGI:
623334
UniProt:
A0A194WX45
LinkDB
All DBs
Position
Unknown
AA seq
1275 aa
AA seq
DB search
MRLRHFACLAGLLSLASGELYTPKHEAGRCAIRGSCGGSGFFAPPLPCPDNGLAKDPEAD
VRKQLVDLCGPKWNSGSVCCEGSQLDVLSSNLQKAQQFISACPACKENFYNLFCTFTCSP
DQSLFINVTQVEEKSGKLAVAELDQLVSDDYCSGFYDSCKDVKFGPTNTNAMSFIGGGAE
DYTAFLAFLGKKSAFGSPFQINFPRPSDYPESGMGPLGMGAKKCNDEDESFRCACIDCPA
VCPKLPEVAESGSCHVGVLPCLSFAAILTYGVILGLLVTAIVGHVAYAKHARAKSERLRL
LQDTNPSDDEDEGDMVHNGAMYDRPQRNYWINTVCDGAFSRLGHVSARFPGITIGVSVLI
VGLLSLGWINFAIETDPARLWVSPTSDAAQEKAFFDESFGPFYRAEQVFLVNETVTNGTS
PVLSYETLKWWIEVEDRISGLTGNKTRAILDDVCFKPTGEACVVQSVAAYFGNDIESVTE
ANWVNRLRGCVKTPVDCLPDFQLPIERAMVLGGANGSSDPADSSAMIVTWVVNNYADEGS
PELRRAMDWEESMKSELLRVQQEAIDRGLRLSFSTEISLEQELNKSTNTDAKIVIISYII
MFFYASLALGSTTLSLKSMLRNPAVSLVESKFTLGVVGILIVLMSISASIGLFSAAGVKV
TLIIAEVIPFIVLAVGVDNIFLIVHEFERVNISHPDDVVEYRIAKALGRMGPSILLSAIT
ETIAFSLGAFVGMPAVRNFAIYAAGAVFINALLQVTMFVSVLTLNQQRVEDHRADCFPCI
KIKGAGIQLGGSNGNSYPRAYEGQDEGTLQAFIRKHYAPTLLGKKMKVAIVVVFLSLFTA
GIALMPEVSLGLDQRVAIPDDSYLIPYFNDLYDYFESGPPVYFVTRELNVTQRVHQQELC
ARFTTCEQESLTNILESERKRPDVSFIAASTASWIDDYFRWLDPASESCCLDGRKTCFAD
RDPAWNITLSGMPEGDEFIHYIQKWLNSPTDADCALGGQASYSTALVVDAERDTIPASHF
RTSHTPLRSQEDFIAAYASARRISNSIKESTGVEVFPYSVFYIFFDQYASIVRLTATILG
SAVAMILVISSILLGSVRTGAVVTATVIMIVVDIIGTMAVFNVSLNAVSLVNLVICVGIG
VEFCAHIARAFMFPSRAVMERAKNKFRGRDARAWTALVNVGGSVFSGITITKLLGVFVLA
FTRSKIFEIYYFRIWLALVVFAASHALIFLPVALSLVGGDGYIDPESDGGLEEDLASRRY
RAMLPEEDEDTDDEY
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atgagactgaggcatttcgcctgccttgcggggctgctcagtctagcatcgggtgagctc
tatacaccaaagcacgaggcaggaagatgtgccatacggggaagctgtggcggaagtgga
tttttcgctcctcctctaccgtgtcctgataacggacttgcaaaggaccccgaagccgat
gtgaggaagcaactggtggacctctgcgggccaaagtggaactctggctcagtatgctgc
gaaggatcacaactcgatgtcctgtcgtccaacctccagaaagcccagcagttcatttct
gcttgcccggcctgcaaagagaacttttacaatctattctgcacctttacttgttcgcca
gaccaatctctcttcataaatgtaacccaggtcgaggagaaaagtgggaagttggctgtg
gcagagctggaccaacttgtctcggatgactactgttctggattctacgatagctgtaaa
gatgtgaagtttggtcctaccaatacgaatgcgatgagctttattggaggcggcgcagag
gactatactgcctttctggctttccttgggaagaagagtgcttttggctcgccgttccaa
atcaacttccctagaccaagcgactacccagaaagcgggatgggaccattaggtatggga
gccaagaagtgcaacgatgaggacgaaagcttccgctgtgcttgtatcgattgccctgct
gtgtgtccaaaactcccagaggttgccgagtccggttcttgccatgtcggagtcctccct
tgcctgtcattcgctgcgattttgacatacggtgttatccttggattgctggttaccgct
attgttggccatgtggcttatgcgaagcatgctcgcgcaaagagtgaacggctgcgactt
cttcaggatacgaatccaagtgacgatgaagacgaaggagatatggttcacaatggagcc
atgtatgatcgcccacagaggaattactggatcaacaccgtctgtgacggtgctttcagc
aggcttggacacgtatcggcaaggtttccaggtataacaattggcgttagcgtcctcatt
gttggattacttagtctagggtggatcaatttcgccatcgagacggatcctgccaggctg
tgggttagcccaacttcagatgctgctcaggaaaaggccttctttgatgaaagcttcgga
ccattctaccgtgctgagcaagtatttttggtcaatgagactgttacgaatggcacaagt
ccagtgctcagctacgaaactcttaagtggtggatcgaagttgaagatcgcatcagtggt
ctgacgggaaataaaactagagcaatactcgacgatgtctgcttcaaaccaaccggcgaa
gcttgcgttgttcagtcagttgctgcatattttggaaacgacattgaatctgtcactgaa
gccaactgggtgaacaggcttcgtgggtgcgtcaagactcctgttgactgtcttcctgac
ttccaacttcccattgagcgagccatggtcctcggaggagccaacggctctagtgatccc
gctgattcatctgctatgattgtcacttgggtggtcaacaactatgccgatgaaggttcg
cccgagcttcgtagagctatggactgggaggaatccatgaagtcagaactgctacgcgta
caacaggaagccatcgaccgtggactgagactgtcgttctctacggagatcagtttggaa
caagaacttaacaagtcaaccaatactgatgcgaagattgttattatcagctacatcatc
atgttcttctatgcttcactcgctctgggatccacgacactgtcattgaaatccatgctg
cgcaacccagcagtctcactcgtcgaatccaagttcaccctaggtgtagtaggcatcttg
atagttttgatgtcaatctcagcatcgattggattattctcagccgctggagtcaaggtc
actctcattatcgcagaagttatccctttcatcgtattagctgttggtgtggacaacatt
ttcctgattgtccacgagttcgagagagtgaacatcagccatccagatgatgtggttgaa
tatagaatcgccaaggctttgggacgaatggggccatctatccttttgtctgcgattacc
gagacaatcgctttctctctaggagcctttgttggcatgccagctgtgcgaaacttcgca
atctacgccgccggtgcagtgtttatcaacgcactgctacaggtaaccatgtttgtttcg
gtgctgacgctaaatcaacagcgagtcgaagaccatcgagctgactgcttcccttgcatc
aagatcaagggcgctggaatacagcttggcggttcgaatggaaatagctacccaagagct
tacgaaggccaggacgaaggaactctacaggcgtttatccgcaagcactatgctcccacc
ctacttgggaagaagatgaaagtggctatcgtagtcgtctttctaagcctcttcacagca
ggaattgccttgatgcccgaggtctctcttggcttggaccaacgtgtagccattcccgac
gactcgtacctgatcccatacttcaatgatctttatgattatttcgagtcaggtcctcca
gtttacttcgtcactcgcgaattgaacgttacgcaaagagtacaccagcaggaactctgc
gctcgattcacaacttgtgagcaagaatcactgacgaacatcctcgagtcggagcgaaag
agaccagatgtctcatttattgccgcatctactgcgagctggatcgatgattatttccgt
tggcttgatcctgcatctgaatcttgctgccttgatggacgaaagacatgcttcgcagat
cgtgatccggcgtggaatatcactctgtctggcatgcctgaaggcgatgaattcatccac
tatatccagaagtggctcaactctccaacagacgcagactgcgcgctcggaggccaggct
tcctacagtaccgctctcgttgttgacgcagagcgagacacaataccagccagccatttc
cgcaccagccatacacccctccgaagccaggaggactttatcgctgcgtatgcttcggcg
cgcagaatatcgaatagcatcaaggaaagcactggtgtcgaagtgttcccctacagcgtg
ttctacatcttctttgatcaatacgcttctatcgttcgacttacagctactatcctgggg
tcagccgtagctatgatccttgtgatctcgtctattctcctcgggtctgtcaggactggc
gctgttgtcaccgcaacagtgatcatgattgtcgtcgacatcatcggtacaatggctgtt
ttcaacgtgtcattgaacgccgtcagtcttgtcaaccttgtgatttgcgtcggtatcggt
gtcgaattctgcgcccacattgcacgagcattcatgttcccatctcgcgccgtcatggaa
cgagcaaagaataagttccgtggccgtgatgcccgagcatggaccgcacttgtcaacgtt
ggtggctctgtcttttccgggattacaataactaagctgctcggtgtttttgtccttgca
ttcacaagaagcaagattttcgagatatattacttcaggatctggttggcgctggtcgtc
tttgccgcttcacatgcgttaattttcttgcccgtggcactcagtctcgtgggtggagat
ggatacattgatccagagagtgatggtggtttggaggaagatttggcaagtagacgatat
agggctatgttaccagaagaggatgaggatacggatgatgaatattga
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