KEGG   Mollisia scopiformis: LY89DRAFT_634949
Entry
LY89DRAFT_634949  CDS       T04865                                 
Name
(RefSeq) exoribonuclease family protein
  KO
K11600  exosome complex component RRP41
Organism
psco  Mollisia scopiformis
Pathway
psco03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LY89DRAFT_634949
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psco03019]
    LY89DRAFT_634949
Messenger RNA biogenesis [BR:psco03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     LY89DRAFT_634949
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     LY89DRAFT_634949
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 28821140
NCBI-ProteinID: XP_018079045
JGI: 634949
UniProt: A0A194XWL2
LinkDB
Position
Unknown
AA seq 253 aa
MPLDTSTYSLALLRLDGRRWNELRRLNAQMRTQAAADGSSYLEMGNTKVICTVTGPAEPK
GGRQGGSGEKADIQVSISIAGFSGVDRKKTGRNDKRVSEMQNTITEAFSQSLFTNLYPHS
TISLSIHVLSQDGALLSACINASTLALIDAGIPMRDYICACTAGSTSSYGSNDEQADPLL
DLNNVEEQELPFLTVATLGASDAVSVLVMETRVQGGRLEGMLAVGVDGCKQIREILDQVV
KERGKKILDGSQL
NT seq 762 nt   +upstreamnt  +downstreamnt
atgcctctcgatacctcaacgtactccctcgcacttctccgcctcgatggccgacgatgg
aacgaacttcgacgtctcaatgcgcaaatgcgaacccaagccgcagcagacggttcctca
tacctggaaatgggcaatactaaggtgatctgcaccgtgacgggacctgcagagccaaaa
ggcggaagacaggggggaagcggcgagaaggcggacatacaggtatcgatatctattgct
ggattcagtggtgtggacaggaagaaaacgggcaggaatgataagagagtctcagagatg
caaaacacgatcacggaagcattctcccagtcactatttacgaatctatatccacacagc
acgatctccctctctatccacgtcctctctcaagacggcgctcttctctctgcatgtatc
aatgcttccactctcgccttgatcgatgccggaattccaatgcgagactacatctgtgcc
tgtacagctggctctacatcaagctacggcagcaatgacgaacaagcagacccgttgtta
gatttgaataatgtagaggagcaggaattgcctttcttaacggttgctacattgggcgcg
agtgatgctgtgagtgtcttagtcatggagaccagagttcaagggggaagactagaaggc
atgcttgctgtgggtgttgatggatgtaagcaaatcagagagatcctggatcaggtcgtg
aaggagagagggaagaagatcttggatgggagtcaactatag

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