KEGG   Mollisia scopiformis: LY89DRAFT_638343
Entry
LY89DRAFT_638343  CDS       T04865                                 
Name
(RefSeq) WD repeat-containing protein-like protein
  KO
K14962  COMPASS component SWD2
Organism
psco  Mollisia scopiformis
Pathway
psco03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:psco00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    LY89DRAFT_638343
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psco03019]
    LY89DRAFT_638343
   03036 Chromosome and associated proteins [BR:psco03036]
    LY89DRAFT_638343
Messenger RNA biogenesis [BR:psco03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     LY89DRAFT_638343
Chromosome and associated proteins [BR:psco03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     LY89DRAFT_638343
    COMPASS/SET1 complex (yeast)
     LY89DRAFT_638343
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_EML Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 EIF3I WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_WDR19_1st NOL11_N Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 28821295
NCBI-ProteinID: XP_018076487
JGI: 638343
UniProt: A0A194XQX4
LinkDB
Position
Unknown
AA seq 385 aa
MSSTPMQIDSPMGNGITGRANGVQATAMLSEMIPIFRPTKHWRRDTPIPGSRNTAPTTIL
SLDFDDEGGLLLTSESDSSMQIYNVKEGKQHKTCLSHKYGVAKAIFGHATGCIIHSSTKL
NNTIRYLSTHDNSYLRYFEGHTEAVTCLALHPGQDTFLSCSYDNTLRIWDSATKNVAGRL
DLHGAYLTAWDPSGYVFAVASPTAAAIVLYDFRNFDKAPFASFDMLPYSGEMGEGMSRGW
NKLEFSNDGKHLLLGTTGNSHFLLDAFDGHVKASLRKDRGSVRRLGPGEHNPENMDPMSS
DYLFPSTGDCCFSPDGRYVLSGTRQRNVLVWETLGGSTETSRSVVPAHELDYAGDTALMA
FNPRYNMFATADKEVVFWLPDQSLA
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgtcttcaacacctatgcaaatcgattctcccatgggaaatggtattacaggaagagcc
aatggagtccaagctacagccatgctctcagagatgattcccatattccgacctacaaag
cattggcgccgtgatacccccattccaggatcaagaaatacagcacccaccaccatcctc
tctcttgacttcgacgatgaaggtggcttgcttttgacctctgaaagtgacagtagtatg
caaatatacaacgtcaaagagggcaaacaacacaaaacatgcctcagccacaagtacggt
gtggcgaaggcgatttttggtcacgcgactggatgtattattcattcgagtaccaagcta
aacaacacaatccgttacctctcgacccatgataactcttacctccgctacttcgaaggc
catacggaagccgtcacgtgtctggctcttcacccaggccaagacaccttcctgtcctgc
tcctacgacaacaccctccggatctgggactccgccacaaagaacgtagccgggcgactc
gacctccatggcgcctatctcacagcctgggacccctctggttatgtcttcgccgtagct
tctcctaccgcagcagccatcgttctctatgacttcagaaacttcgacaaagctcctttc
gcaagtttcgacatgttgccgtattcaggagagatgggcgagggtatgagccgtggatgg
aataagctcgaattcagtaatgatggtaaacatcttcttctcggcactacaggcaattct
cacttcctgctcgacgctttcgatggccacgtcaaggcctctctacgcaaggatcgaggc
agcgttcgtcgacttggccctggtgaacataatcccgagaacatggatcccatgtctagc
gattatctgtttccgagtacgggtgattgctgcttcagtcctgatggaagatatgtgctc
agtggaacaagacaacggaacgtgcttgtgtgggagacattgggtggttcgactgagact
tcgagatctgtggtccctgctcatgagctggattacgctggcgatacagcgttgatggct
tttaatccgaggtataatatgtttgctacagcggataaggaggttgtgttctggttgccc
gatcaaagtttggcctga

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