Mollisia scopiformis: LY89DRAFT_638454
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Entry
LY89DRAFT_638454 CDS
T04865
Name
(RefSeq) nucleic acid-binding protein
KO
K14792
rRNA biogenesis protein RRP5
Organism
psco
Mollisia scopiformis
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psco03009
]
LY89DRAFT_638454
Ribosome biogenesis [BR:
psco03009
]
Eukaryotic type
90S particles
Other 90S particles
LY89DRAFT_638454
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_RRP5_4th
Spt6_S1
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
TPR_14
Suf
HAT_Syf1_CNRKL1_C
RNase_II_C_S1
TPR_19
NRDE-2
TPR_6
TPR_TmcB
Motif
Other DBs
NCBI-GeneID:
28821304
NCBI-ProteinID:
XP_018076559
JGI:
638454
UniProt:
A0A194XQ73
LinkDB
All DBs
Position
Unknown
AA seq
1809 aa
AA seq
DB search
MAPIDKKRKTGPTNESFARSRKPVEEESRPSKRLRQEDKHESKTTTPKTTTPKTTTPKTS
LVPKITKAREEDAAFPRGGASLLTPLEHKQIQIQATRDVLFEQSAKSSKTNEDGTTNGTA
DRKKQKSRSKGKGKKAAEEPEPEEADVKIEGLSYKRIVPGSLVLGQVSQVNDHDIALSLP
NNLTGYVPITSISDKITERIEAIATKEDSEEDDEQGNSEDIELGRLFSIGQYLRAYVMST
GDDDSATPGKSKRRIELSLKPQQSNNSLSQRNVITNSTLMASVKSVEDHGLVMDLGLDDP
EMKGFMGAKEIPFGAKLSDIIEGAVYLCVVTGLSSNSKIVKLSTDVRKIGDIKKQNFLSE
APAVDAFLPGTAVEVLITDVSSRGLAGKIMGMVDVTADLMHSGAAIDGKDLQARYKIGSK
AKARIICTFPTSDPPKLGVSLLDHVVSLRSQLATKDGEKQHPLEILPLSTIIEEITVKKV
ESGVGLLVDVGLEGVSGFVHISRVKDGKIENLFESSGPYKVGSSHRGRLVGYNLLDGMYL
VSMEASILEQPFLRIEDLTVAEVVKGKVEKIVVDASGVGGLLVTLAEGITGLVPKTHMSD
IQLLHPEKKFKEGLAVTARVLSTDPGKRQFRLTLKKSLVNSEAAPFINYNEIAPGMQSPG
TIVNILPNGAVVQFYGTIRGFLPVAEMSEAYIQDPNQHFRVGQVVNVHVLTVDAEKEKLL
VSCKDASTFGAAQQAAMQKLKIGDIVSAVVTEKSSDDISVELQGLGIRAVLPVGQLTDGS
SSKNASALKRIRVGQTLADLAVLEKMEQKHLVVLTNKPSLVADAKNRVLLRSFDDVKENK
TVHGFVRNVTLTGVFVQFGGNLTGLLPKNKLPSDTISLPEFCLKKYQSLEAKVISVDHSQ
RRFLLSMVDAGRKQEPTEEQSSNTTISRPVIDPIDSTISSMEDFSLGKLTKARIASIKDT
QINVQLAAGIQGRIDVSQVFDSWDQIKDRKRPLRPFSSKQIVNVRVLGIHDARNHRFLPI
SHRGGKNFVFELSAKPSDQSESSQGPLTLDQVKVGSSHLVFVNNITEDGLWVNLSPNVRG
KIKALDVSDDVSLLGDLESNFPVGSALRVHVTNVDVANNRLDLSARSSKTSEPLTFKNLS
KGMVVPGKVTRVNERQVMIQLSDRISAPVHLTDLTDDFSLADPTKYSKNDIVRVCVTEID
APNKRITLSARPSRVLDSSLSVQDPEIISVSQLKVNDIVRGFVKNVHDKGLFVAIGANVT
AYVRVSELSDSFLKDWKSEFEVDQLIKGKITKVDLENNNVQMSLKASVLDKDYVAPLAFE
DMKVGQIITGKIRKVEDYGVFIVVDGSQNVSGLCHQSQMADKGVKDVRKLYDEGDVVKAK
VLRINPEKRQINFGLKASYLGETGDSDSEEADDAADAMEGIRIAGSDVEDDDSDDEAGGV
DLDDIESIGSAAVQNQDDSDKEMADADEENVAGLSAGGFDWSADILNQAEDQSSVASDDD
EMKEQPKKKKKRKAEIQVDKTGDLDANGPQSASDFERLLLGQPDSSQLWIQYMAFQMQLS
ELSKAREVAERAIKIINIREETEKMNVWIALLNLENAYGSDETVEEIFKRACQYNDAQEI
HERLASIYIQSGKNNKADEIFQVLVKKFSQSPTVWYNYAHFLHSTLSSPDRARALLPRAT
QSLPPHTHLNLTLKFAALEFHSPAGSAERGRTMFESLVSTFPKRLDIWNQLLDLEMQQGD
QDVIRGVFERVVKTKGLKPKGAKAWFKRWAEWEEKNGDKKSQEKVKAKAEEWVLNAARKK
GVAEDNDDD
NT seq
5430 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaattgacaagaagaggaagactggtcccacgaacgaatcttttgcgcgatca
aggaaacctgtcgaagaagaaagtcgaccttcaaaaagattgagacaggaagacaagcac
gagagcaagacgacaactcccaagacgacaactcccaagacgacaactcccaagacttct
ctggttccaaagattacaaaggcgcgggaagaagatgctgcctttcctagaggtggagca
agtctcttgactccgttggagcacaagcaaattcaaatccaagctactcgagatgttttg
tttgaacaaagcgcaaagtcgtcaaagacgaacgaggatggcacaactaacggcacagcc
gatcgcaagaagcaaaaatcgaggtccaagggaaagggtaagaaggctgcagaggagccc
gagccagaagaagcggatgtgaaaattgagggattgagttacaagcgaattgtgccagga
tcactagtactaggccaagtttcccaagtcaatgatcacgatattgccctgtcactgccg
aacaatttgactggctacgtgccaataacctctatttccgataagatcactgagaggatc
gaggcaatcgcaaccaaggaagactcagaagaagatgacgagcaaggtaattctgaagac
attgaattagggagacttttctccataggccaatacctccgagcttatgtcatgtctact
ggcgacgacgattccgcaacaccaggaaaatccaagagacgaatagaactatcactgaag
cctcagcagtcgaacaactccctatcacagcgaaatgttatcaccaacagcacgcttatg
gcatcggtgaaaagtgtcgaagatcacggccttgtcatggatctgggtcttgatgacccc
gaaatgaaaggattcatgggagccaaggagattccatttggtgctaagctctcagatatc
atagagggtgcagtctatctctgtgtggtcacgggcctcagctccaattccaaaatcgtg
aagctatctacggatgtgcggaaaattggcgatataaagaaacagaactttttgtccgaa
gcacctgctgttgatgccttcctaccaggtacagcagttgaagtcctaattacggatgtg
tcatctagaggattagctggaaagataatgggtatggtcgacgttacggcagatctcatg
cattccggggctgccattgatgggaaagacctgcaggccaggtataagatcggttctaaa
gcaaaggccagaatcatctgcaccttccccacctccgatccgcccaagctcggagtatcg
cttcttgaccacgtggtttctttgcgctctcaactggccacaaaagatggtgagaaacaa
catcctctagaaatcctaccactgtcaacgatcatcgaagaaattactgtcaaaaaagta
gaatcgggagttggccttttggttgacgtcggattggagggcgtctctggatttgtgcac
atctctcgcgttaaggatggcaaaattgagaaccttttcgagtcgagtgggccatacaaa
gttggctcaagtcatcgaggtcgacttgtcggttacaacttgcttgacggcatgtatctc
gtatcgatggaggctagcatcctggaacaaccctttctgcgaatcgaggatttgactgtg
gccgaagtagtcaaaggaaaggttgagaagattgttgtcgacgcttctggtgttggtggc
ctcttggtcactctggccgaaggcatcaccggtcttgttccaaaaactcacatgtctgac
attcaactacttcacccggagaagaaattcaaagaaggactagctgtgactgctcgggtg
ttatctacggatccaggcaaacggcaatttcggttaaccttgaagaagagtttagtcaat
tctgaagcggcgccgtttatcaattacaatgagatcgctcctggcatgcagagtcctggg
acgatcgttaacatccttccgaatggcgccgtggttcaattctatggcacgatacgaggc
ttcttgcctgtggctgagatgagtgaggcttacatacaagatcctaatcaacacttccgc
gttggacaagttgtgaatgttcatgttctcacagttgacgcggagaaagaaaagctacta
gtttcttgcaaagacgcgtccacattcggagctgcccagcaagctgcgatgcagaagctg
aagataggcgacatcgtctcggctgtcgtcacagagaagtccagcgacgacatatctgtc
gaacttcaaggccttggcattcgtgccgtgcttccagtcggacagcttaccgacggatct
tcttccaagaacgcatctgcgctgaaaaggatccgcgtcgggcagactctggctgatcta
gcagtcctcgaaaagatggagcagaaacatcttgtagtcctgactaacaagcctagtctc
gtcgcagatgccaagaaccgagtactcttgagaagctttgacgacgtcaaggagaacaag
acagtccatggatttgtcaggaacgtgaccctcacaggagtttttgttcagtttggaggg
aacttgacgggcttgttgcctaagaataagctaccttcagatactatcagccttcccgag
ttttgtctcaaaaaatatcaatccttagaagccaaggtgatatctgttgatcacagtcag
cggagatttctactctctatggtggatgctggccgcaaacaagaacccacggaggaacaa
tcttccaataccacgattagtcggcctgtcatcgacccaatcgacagcacgatctcgagc
atggaagacttttctctagggaaactgacgaaagcaagaatagcatctatcaaggatacg
cagatcaatgtacaacttgcagctggtattcaaggtcgaattgacgtctcacaagttttc
gattcttgggatcagataaaagaccggaagaggcctctgcgacctttctcatccaagcaa
attgtcaatgtccgagtccttggcatccacgacgcacgaaaccaccgctttctaccgatt
tcgcacagaggaggaaaaaactttgtcttcgagctttcagcgaagcccagtgaccagtca
gagtcatctcaagggccattaacgcttgatcaagtcaaagttggttcttcacatcttgtt
ttcgtgaacaatattaccgaagatggtttatgggtaaacctttcgcctaacgttcggggt
aagataaaggcactggacgtgtccgatgatgtgtctctgctgggtgacctcgagtcaaac
tttcctgttggttcagctcttagagttcacgttaccaacgtggacgtggccaacaatcga
ttagacctttctgctcgttccagcaagacatctgaaccactgacgttcaagaatctcagt
aaaggcatggttgtgccaggaaaggtgaccagagtcaacgaaagacaggtcatgattcag
cttagtgacagaatatctgctcctgtacatctgactgatcttaccgatgatttttcattg
gcggatccaacaaaatattcgaagaacgacattgttcgggtttgtgtaacggaaattgat
gcgccaaacaagagaattactttgtctgctcgaccttcaagggtccttgactcgtctctg
tccgtgcaagatcccgagataatatcagtttctcaattgaaagtcaatgatattgtgcga
ggttttgtcaagaacgtacacgacaaaggcttgttcgttgcaattggggccaatgtcact
gcctacgttcgagtatctgaactttctgattcatttctcaaagactggaaatcggaattt
gaggttgatcaactcatcaaggggaagattacgaaggttgatctggagaacaataacgtc
caaatgtccttgaaggcttcagtcttagacaaggattatgtggcgccactcgctttcgaa
gacatgaaggttggccagatcatcactggcaagatcagaaaggtggaagattatggcgtg
ttcattgttgtcgacgggtcacaaaacgtcagcgggctctgtcatcaaagtcagatggcc
gacaagggtgtaaaggatgtcagaaagctatacgatgaaggcgacgttgtcaaagccaaa
gtgttgagaatcaatcccgaaaagagacagatcaacttcggcctcaaagcgtcttatctt
ggtgagactggagattcggatagtgaggaggctgatgacgcagcggatgctatggaaggc
atcagaatagccggctctgacgtggaagatgatgactccgatgacgaggctggtggtgtc
gacctcgacgatattgaaagcattggcagcgctgctgtacagaaccaagatgactccgat
aaagaaatggcggacgcagacgaggaaaatgttgccggtctcagtgctggtggctttgat
tggtcagccgatattctcaaccaagctgaagaccagtctagcgtggcttctgatgatgat
gagatgaaggagcagccgaagaaaaagaagaaaagaaaggcggaaatccaagtcgacaag
acaggtgatttggatgctaatggcccacaatctgctagcgactttgaaagactgcttctt
gggcagccagattcatctcagctttggatccagtacatggcttttcagatgcaacttagt
gaactaagcaaagcaagggaagtggctgagcgtgctatcaagataatcaatatcagagag
gagacggaaaagatgaatgtttggatagctctactcaatctagagaacgcgtacggcagc
gacgagactgtcgaggagattttcaagcgggcatgccaatacaatgatgctcaggagatt
catgagcggttagccagtatctacatacaatctggcaagaacaacaaagccgacgagatc
ttccaggtgcttgttaaaaaattctcgcaatcaccgacggtttggtataattatgctcat
ttcctgcactcaacgctatcatcgccagatcgtgcgcgagctcttcttccccgagcaact
caatcactaccaccacatacgcacctgaaccttactcttaaatttgctgctttggaattc
cattctccagctggctctgcagagcgagggcgaacaatgttcgagtcgctggtctctacg
ttccccaagagactcgatatttggaatcagttgcttgatctggaaatgcagcaaggcgac
caagatgtcattcgaggtgtttttgagcgtgttgtaaagactaaaggactcaagccgaag
ggtgcaaaagcttggttcaagcgatgggcagagtgggaagagaagaacggggacaaaaag
agtcaggagaaggtgaaggcaaaggccgaagagtgggtcttgaatgcagcccgaaagaaa
ggagtagcagaggataatgatgatgactga
DBGET
integrated database retrieval system