KEGG   Mollisia scopiformis: LY89DRAFT_638454
Entry
LY89DRAFT_638454  CDS       T04865                                 
Name
(RefSeq) nucleic acid-binding protein
  KO
K14792  rRNA biogenesis protein RRP5
Organism
psco  Mollisia scopiformis
Brite
KEGG Orthology (KO) [BR:psco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:psco03009]
    LY89DRAFT_638454
Ribosome biogenesis [BR:psco03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    LY89DRAFT_638454
SSDB
Motif
Pfam: S1 S1_RRP5 OB_RRP5_4th Spt6_S1 HAT_PRP39_C HAT_PRP39_N HAT_Syf1_CNRKL1_N TPR_14 Suf HAT_Syf1_CNRKL1_C RNase_II_C_S1 TPR_19 NRDE-2 TPR_6 TPR_TmcB
Other DBs
NCBI-GeneID: 28821304
NCBI-ProteinID: XP_018076559
JGI: 638454
UniProt: A0A194XQ73
LinkDB
Position
Unknown
AA seq 1809 aa
MAPIDKKRKTGPTNESFARSRKPVEEESRPSKRLRQEDKHESKTTTPKTTTPKTTTPKTS
LVPKITKAREEDAAFPRGGASLLTPLEHKQIQIQATRDVLFEQSAKSSKTNEDGTTNGTA
DRKKQKSRSKGKGKKAAEEPEPEEADVKIEGLSYKRIVPGSLVLGQVSQVNDHDIALSLP
NNLTGYVPITSISDKITERIEAIATKEDSEEDDEQGNSEDIELGRLFSIGQYLRAYVMST
GDDDSATPGKSKRRIELSLKPQQSNNSLSQRNVITNSTLMASVKSVEDHGLVMDLGLDDP
EMKGFMGAKEIPFGAKLSDIIEGAVYLCVVTGLSSNSKIVKLSTDVRKIGDIKKQNFLSE
APAVDAFLPGTAVEVLITDVSSRGLAGKIMGMVDVTADLMHSGAAIDGKDLQARYKIGSK
AKARIICTFPTSDPPKLGVSLLDHVVSLRSQLATKDGEKQHPLEILPLSTIIEEITVKKV
ESGVGLLVDVGLEGVSGFVHISRVKDGKIENLFESSGPYKVGSSHRGRLVGYNLLDGMYL
VSMEASILEQPFLRIEDLTVAEVVKGKVEKIVVDASGVGGLLVTLAEGITGLVPKTHMSD
IQLLHPEKKFKEGLAVTARVLSTDPGKRQFRLTLKKSLVNSEAAPFINYNEIAPGMQSPG
TIVNILPNGAVVQFYGTIRGFLPVAEMSEAYIQDPNQHFRVGQVVNVHVLTVDAEKEKLL
VSCKDASTFGAAQQAAMQKLKIGDIVSAVVTEKSSDDISVELQGLGIRAVLPVGQLTDGS
SSKNASALKRIRVGQTLADLAVLEKMEQKHLVVLTNKPSLVADAKNRVLLRSFDDVKENK
TVHGFVRNVTLTGVFVQFGGNLTGLLPKNKLPSDTISLPEFCLKKYQSLEAKVISVDHSQ
RRFLLSMVDAGRKQEPTEEQSSNTTISRPVIDPIDSTISSMEDFSLGKLTKARIASIKDT
QINVQLAAGIQGRIDVSQVFDSWDQIKDRKRPLRPFSSKQIVNVRVLGIHDARNHRFLPI
SHRGGKNFVFELSAKPSDQSESSQGPLTLDQVKVGSSHLVFVNNITEDGLWVNLSPNVRG
KIKALDVSDDVSLLGDLESNFPVGSALRVHVTNVDVANNRLDLSARSSKTSEPLTFKNLS
KGMVVPGKVTRVNERQVMIQLSDRISAPVHLTDLTDDFSLADPTKYSKNDIVRVCVTEID
APNKRITLSARPSRVLDSSLSVQDPEIISVSQLKVNDIVRGFVKNVHDKGLFVAIGANVT
AYVRVSELSDSFLKDWKSEFEVDQLIKGKITKVDLENNNVQMSLKASVLDKDYVAPLAFE
DMKVGQIITGKIRKVEDYGVFIVVDGSQNVSGLCHQSQMADKGVKDVRKLYDEGDVVKAK
VLRINPEKRQINFGLKASYLGETGDSDSEEADDAADAMEGIRIAGSDVEDDDSDDEAGGV
DLDDIESIGSAAVQNQDDSDKEMADADEENVAGLSAGGFDWSADILNQAEDQSSVASDDD
EMKEQPKKKKKRKAEIQVDKTGDLDANGPQSASDFERLLLGQPDSSQLWIQYMAFQMQLS
ELSKAREVAERAIKIINIREETEKMNVWIALLNLENAYGSDETVEEIFKRACQYNDAQEI
HERLASIYIQSGKNNKADEIFQVLVKKFSQSPTVWYNYAHFLHSTLSSPDRARALLPRAT
QSLPPHTHLNLTLKFAALEFHSPAGSAERGRTMFESLVSTFPKRLDIWNQLLDLEMQQGD
QDVIRGVFERVVKTKGLKPKGAKAWFKRWAEWEEKNGDKKSQEKVKAKAEEWVLNAARKK
GVAEDNDDD
NT seq 5430 nt   +upstreamnt  +downstreamnt
atggcaccaattgacaagaagaggaagactggtcccacgaacgaatcttttgcgcgatca
aggaaacctgtcgaagaagaaagtcgaccttcaaaaagattgagacaggaagacaagcac
gagagcaagacgacaactcccaagacgacaactcccaagacgacaactcccaagacttct
ctggttccaaagattacaaaggcgcgggaagaagatgctgcctttcctagaggtggagca
agtctcttgactccgttggagcacaagcaaattcaaatccaagctactcgagatgttttg
tttgaacaaagcgcaaagtcgtcaaagacgaacgaggatggcacaactaacggcacagcc
gatcgcaagaagcaaaaatcgaggtccaagggaaagggtaagaaggctgcagaggagccc
gagccagaagaagcggatgtgaaaattgagggattgagttacaagcgaattgtgccagga
tcactagtactaggccaagtttcccaagtcaatgatcacgatattgccctgtcactgccg
aacaatttgactggctacgtgccaataacctctatttccgataagatcactgagaggatc
gaggcaatcgcaaccaaggaagactcagaagaagatgacgagcaaggtaattctgaagac
attgaattagggagacttttctccataggccaatacctccgagcttatgtcatgtctact
ggcgacgacgattccgcaacaccaggaaaatccaagagacgaatagaactatcactgaag
cctcagcagtcgaacaactccctatcacagcgaaatgttatcaccaacagcacgcttatg
gcatcggtgaaaagtgtcgaagatcacggccttgtcatggatctgggtcttgatgacccc
gaaatgaaaggattcatgggagccaaggagattccatttggtgctaagctctcagatatc
atagagggtgcagtctatctctgtgtggtcacgggcctcagctccaattccaaaatcgtg
aagctatctacggatgtgcggaaaattggcgatataaagaaacagaactttttgtccgaa
gcacctgctgttgatgccttcctaccaggtacagcagttgaagtcctaattacggatgtg
tcatctagaggattagctggaaagataatgggtatggtcgacgttacggcagatctcatg
cattccggggctgccattgatgggaaagacctgcaggccaggtataagatcggttctaaa
gcaaaggccagaatcatctgcaccttccccacctccgatccgcccaagctcggagtatcg
cttcttgaccacgtggtttctttgcgctctcaactggccacaaaagatggtgagaaacaa
catcctctagaaatcctaccactgtcaacgatcatcgaagaaattactgtcaaaaaagta
gaatcgggagttggccttttggttgacgtcggattggagggcgtctctggatttgtgcac
atctctcgcgttaaggatggcaaaattgagaaccttttcgagtcgagtgggccatacaaa
gttggctcaagtcatcgaggtcgacttgtcggttacaacttgcttgacggcatgtatctc
gtatcgatggaggctagcatcctggaacaaccctttctgcgaatcgaggatttgactgtg
gccgaagtagtcaaaggaaaggttgagaagattgttgtcgacgcttctggtgttggtggc
ctcttggtcactctggccgaaggcatcaccggtcttgttccaaaaactcacatgtctgac
attcaactacttcacccggagaagaaattcaaagaaggactagctgtgactgctcgggtg
ttatctacggatccaggcaaacggcaatttcggttaaccttgaagaagagtttagtcaat
tctgaagcggcgccgtttatcaattacaatgagatcgctcctggcatgcagagtcctggg
acgatcgttaacatccttccgaatggcgccgtggttcaattctatggcacgatacgaggc
ttcttgcctgtggctgagatgagtgaggcttacatacaagatcctaatcaacacttccgc
gttggacaagttgtgaatgttcatgttctcacagttgacgcggagaaagaaaagctacta
gtttcttgcaaagacgcgtccacattcggagctgcccagcaagctgcgatgcagaagctg
aagataggcgacatcgtctcggctgtcgtcacagagaagtccagcgacgacatatctgtc
gaacttcaaggccttggcattcgtgccgtgcttccagtcggacagcttaccgacggatct
tcttccaagaacgcatctgcgctgaaaaggatccgcgtcgggcagactctggctgatcta
gcagtcctcgaaaagatggagcagaaacatcttgtagtcctgactaacaagcctagtctc
gtcgcagatgccaagaaccgagtactcttgagaagctttgacgacgtcaaggagaacaag
acagtccatggatttgtcaggaacgtgaccctcacaggagtttttgttcagtttggaggg
aacttgacgggcttgttgcctaagaataagctaccttcagatactatcagccttcccgag
ttttgtctcaaaaaatatcaatccttagaagccaaggtgatatctgttgatcacagtcag
cggagatttctactctctatggtggatgctggccgcaaacaagaacccacggaggaacaa
tcttccaataccacgattagtcggcctgtcatcgacccaatcgacagcacgatctcgagc
atggaagacttttctctagggaaactgacgaaagcaagaatagcatctatcaaggatacg
cagatcaatgtacaacttgcagctggtattcaaggtcgaattgacgtctcacaagttttc
gattcttgggatcagataaaagaccggaagaggcctctgcgacctttctcatccaagcaa
attgtcaatgtccgagtccttggcatccacgacgcacgaaaccaccgctttctaccgatt
tcgcacagaggaggaaaaaactttgtcttcgagctttcagcgaagcccagtgaccagtca
gagtcatctcaagggccattaacgcttgatcaagtcaaagttggttcttcacatcttgtt
ttcgtgaacaatattaccgaagatggtttatgggtaaacctttcgcctaacgttcggggt
aagataaaggcactggacgtgtccgatgatgtgtctctgctgggtgacctcgagtcaaac
tttcctgttggttcagctcttagagttcacgttaccaacgtggacgtggccaacaatcga
ttagacctttctgctcgttccagcaagacatctgaaccactgacgttcaagaatctcagt
aaaggcatggttgtgccaggaaaggtgaccagagtcaacgaaagacaggtcatgattcag
cttagtgacagaatatctgctcctgtacatctgactgatcttaccgatgatttttcattg
gcggatccaacaaaatattcgaagaacgacattgttcgggtttgtgtaacggaaattgat
gcgccaaacaagagaattactttgtctgctcgaccttcaagggtccttgactcgtctctg
tccgtgcaagatcccgagataatatcagtttctcaattgaaagtcaatgatattgtgcga
ggttttgtcaagaacgtacacgacaaaggcttgttcgttgcaattggggccaatgtcact
gcctacgttcgagtatctgaactttctgattcatttctcaaagactggaaatcggaattt
gaggttgatcaactcatcaaggggaagattacgaaggttgatctggagaacaataacgtc
caaatgtccttgaaggcttcagtcttagacaaggattatgtggcgccactcgctttcgaa
gacatgaaggttggccagatcatcactggcaagatcagaaaggtggaagattatggcgtg
ttcattgttgtcgacgggtcacaaaacgtcagcgggctctgtcatcaaagtcagatggcc
gacaagggtgtaaaggatgtcagaaagctatacgatgaaggcgacgttgtcaaagccaaa
gtgttgagaatcaatcccgaaaagagacagatcaacttcggcctcaaagcgtcttatctt
ggtgagactggagattcggatagtgaggaggctgatgacgcagcggatgctatggaaggc
atcagaatagccggctctgacgtggaagatgatgactccgatgacgaggctggtggtgtc
gacctcgacgatattgaaagcattggcagcgctgctgtacagaaccaagatgactccgat
aaagaaatggcggacgcagacgaggaaaatgttgccggtctcagtgctggtggctttgat
tggtcagccgatattctcaaccaagctgaagaccagtctagcgtggcttctgatgatgat
gagatgaaggagcagccgaagaaaaagaagaaaagaaaggcggaaatccaagtcgacaag
acaggtgatttggatgctaatggcccacaatctgctagcgactttgaaagactgcttctt
gggcagccagattcatctcagctttggatccagtacatggcttttcagatgcaacttagt
gaactaagcaaagcaagggaagtggctgagcgtgctatcaagataatcaatatcagagag
gagacggaaaagatgaatgtttggatagctctactcaatctagagaacgcgtacggcagc
gacgagactgtcgaggagattttcaagcgggcatgccaatacaatgatgctcaggagatt
catgagcggttagccagtatctacatacaatctggcaagaacaacaaagccgacgagatc
ttccaggtgcttgttaaaaaattctcgcaatcaccgacggtttggtataattatgctcat
ttcctgcactcaacgctatcatcgccagatcgtgcgcgagctcttcttccccgagcaact
caatcactaccaccacatacgcacctgaaccttactcttaaatttgctgctttggaattc
cattctccagctggctctgcagagcgagggcgaacaatgttcgagtcgctggtctctacg
ttccccaagagactcgatatttggaatcagttgcttgatctggaaatgcagcaaggcgac
caagatgtcattcgaggtgtttttgagcgtgttgtaaagactaaaggactcaagccgaag
ggtgcaaaagcttggttcaagcgatgggcagagtgggaagagaagaacggggacaaaaag
agtcaggagaaggtgaaggcaaaggccgaagagtgggtcttgaatgcagcccgaaagaaa
ggagtagcagaggataatgatgatgactga

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