Mollisia scopiformis: LY89DRAFT_645064
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Entry
LY89DRAFT_645064 CDS
T04865
Name
(RefSeq) eukaryotic initiation factor 4A-12
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
psco
Mollisia scopiformis
Pathway
psco03013
Nucleocytoplasmic transport
psco03015
mRNA surveillance pathway
psco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LY89DRAFT_645064
09122 Translation
03013 Nucleocytoplasmic transport
LY89DRAFT_645064
03015 mRNA surveillance pathway
LY89DRAFT_645064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psco03019
]
LY89DRAFT_645064
03041 Spliceosome [BR:
psco03041
]
LY89DRAFT_645064
03009 Ribosome biogenesis [BR:
psco03009
]
LY89DRAFT_645064
03012 Translation factors [BR:
psco03012
]
LY89DRAFT_645064
Enzymes [BR:
psco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LY89DRAFT_645064
Messenger RNA biogenesis [BR:
psco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
LY89DRAFT_645064
mRNA cycle factors
Stress granule specific factors
LY89DRAFT_645064
Spliceosome [BR:
psco03041
]
Complex C
Other components
EJC/TREX
LY89DRAFT_645064
Ribosome biogenesis [BR:
psco03009
]
Eukaryotic type
90S particles
Helicases
LY89DRAFT_645064
Translation factors [BR:
psco03012
]
Eukaryotic type
Initiation factors
eIF-4
LY89DRAFT_645064
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
COG4_N
TniB
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
28821586
NCBI-ProteinID:
XP_018071881
JGI:
645064
UniProt:
A0A194XBJ0
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MAEGIDRKADERMEFTTSKDVTIAPTFQDMHLKENLLRGIYAYGYESPSAVQSRAIVQIC
KGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYM
NVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRNLRTRHIKMLVLDEADELL
NRGFREQIYDVYRYLPPATQVVVVSATLPYDVLEMTTKFMTDPVRILVKRDELTLEGLKQ
YFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQ
KERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGR
KGVAINFVTSEDVRILRDIECKHPPAVNVKMLMITSVLLNSNR
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaggcatcgatagaaaggcagatgagcgcatggagtttaccacctccaaggac
gtgaccatcgcaccgacctttcaggacatgcatttgaaggaaaaccttctccgtggtatc
tatgcatacggttacgaatctccttccgcagtccaatctcgtgcgatcgtacaaatctgc
aagggtcgcgacacaatcgcccaggcgcaatctggtactggtaaaacagccactttctcc
atcagcatgctccaggtcatcgatacggcagtgcgcgaaacccaggccctcgttctctcg
cctactcgcgaactggcgactcaaattcaatcagtggttatggcattgggcgactacatg
aatgtacaatgtcatgcctgtatcggaggcaccaatgttggcgaagacattcgcaagctc
gattatggccagcacattgtctccggaacaccaggtcgtgttgcagatatgattcgtcgt
cggaatcttcgtacacgccacatcaagatgctggttcttgacgaggctgacgagttgttg
aaccgcggtttcagggagcagatctacgatgtctacagatacctccctcctgccactcag
gtcgtcgttgtttccgctactcttccatacgatgtcctcgaaatgactacgaagtttatg
accgacccagtccgtattctagtcaaacgcgatgaattgacgctggaaggtcttaaacaa
tactttatcgctgtcgagaaggaggaatggaaatttgatactctttgcgatctctacgat
actcttactatcacacaagctgtcatcttctgcaacacccggagaaaggtcgattggctc
acagacaagatgcgtgaggccaacttcacagtttcgtctatgcatggagagatgccacag
aaggagagagacagcattatgcaagacttccgtcaaggcaattcgagagtgctgatctct
actgatgtctgggcccgtggaatcgacgttcagcaggtttcacttgtcatcaactatgac
ttaccaagcaatcgtgagaattatattcaccgtattggtcgaagtggtcgatttggacgc
aagggtgttgctatcaatttcgtgaccagcgaagatgtcaggattttgagagatattgag
tgtaagcatccaccagcggtcaacgtgaaaatgctaatgattacaagtgtactactcaac
tcaaatcgatga
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