KEGG   Mollisia scopiformis: LY89DRAFT_652593
Entry
LY89DRAFT_652593  CDS       T04865                                 
Name
(RefSeq) transcription factor Tfb4
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
psco  Mollisia scopiformis
Pathway
psco03022  Basal transcription factors
psco03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    LY89DRAFT_652593
  09124 Replication and repair
   03420 Nucleotide excision repair
    LY89DRAFT_652593
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psco03021]
    LY89DRAFT_652593
   03400 DNA repair and recombination proteins [BR:psco03400]
    LY89DRAFT_652593
Transcription machinery [BR:psco03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     LY89DRAFT_652593
DNA repair and recombination proteins [BR:psco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     LY89DRAFT_652593
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 28821933
NCBI-ProteinID: XP_018066586
JGI: 652593
UniProt: A0A194WW90
LinkDB
Position
Unknown
AA seq 353 aa
MNAVDGSDHYEVATGGASPSLLVLILDTNPHAWALLSPTLPLSKAIANILVFINAHLAVN
NANQVAIVASHSHRAAWLYPRSPSRAEDVEMSDGSRPSLDNANKYRPFALIEEALLSSLR
ELISTTTETDVATTTTTQMAGALTLALSYINKATMSYSGITTESKPAPTSLETTDTPTGL
QSRILVISVSGDLAHQYIPIMNTTFAAQRLRIPIDILKLAGDTVFLQQASDATKGIYMQL
RNPQGFLQYLMMAFLPDQAARKHLVAPTQEVVDFRAACFCHRKVVDVGFVCSICLSIFCS
PPEGAICLTCSTHLTLGDYGAKPAVVPKKKKKKKKLNGGVDTGSARGTPAPGE
NT seq 1062 nt   +upstreamnt  +downstreamnt
atgaacgcggtagatggctcagatcattatgaagttgcgacaggaggcgcttctccatca
cttctggtcctcattctggacaccaatccccatgcctgggcacttctctctccgacatta
cccctctcgaaagccatagctaacattctcgtcttcataaatgcgcatcttgcggtgaac
aatgcaaaccaagttgctatcgtggccagccatagccaccgcgccgcttggctttaccca
cgatctccatcaagggccgaggatgtcgagatgagcgatggcagtagaccaagcctcgat
aatgcgaacaaataccgcccgtttgcactaatagaagaggcacttctttcctcgctgcgc
gagctcatatctacgaccaccgaaacagatgtcgcgactacaaccacgacgcaaatggcc
ggtgctctaacgctggcactgtcctacataaacaaagctaccatgtcctactctggcata
actacagaatcaaaacctgctccgacgagcctcgagacgactgatacaccaacaggccta
cagagtcgaatactggtcatttcagtctcgggcgatttggcacatcaatatatacctatc
atgaatactacgtttgcagcacagcgattacggataccgatagacattctgaagttagcc
ggagacacagtgtttttacagcaagcatccgacgctacgaagggtatttatatgcagctg
cgaaaccctcaaggttttctacaatatctcatgatggctttccttcccgaccaagcggcc
cggaaacacctagtagctccaacccaagaggtagttgatttcagagcagcatgcttctgt
catagaaaggttgtagatgtgggatttgtttgcagcatttgcttgagcatcttctgctct
ccaccagaaggagctatatgccttacctgctcaacacacctaacccttggtgattatggt
gcaaaacccgctgtcgttccgaagaagaagaagaaaaagaagaaattaaatggtggggtg
gatacaggcagtgcaaggggtactccagctccgggagaatga

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