KEGG   Mollisia scopiformis: LY89DRAFT_653655
Entry
LY89DRAFT_653655  CDS       T04865                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K12601  superkiller protein 8
Organism
psco  Mollisia scopiformis
Pathway
psco03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LY89DRAFT_653655
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psco03019]
    LY89DRAFT_653655
Messenger RNA biogenesis [BR:psco03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     LY89DRAFT_653655
SSDB
Motif
Pfam: WD40_WDHD1_1st Beta-prop_EML_2 WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 ANAPC4_WD40 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N eIF2A Cytochrom_D1 WDR90_beta-prop_4th WD40_RFWD3 Nbas_N Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_Nup120_160 DUF3833 PALB2_WD40 DUF1513 B-prop_COPA_B_2nd Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 28821987
NCBI-ProteinID: XP_018066386
JGI: 653655
UniProt: A0A194WVN4
LinkDB
Position
Unknown
AA seq 311 aa
MSKQYLTTHTVDDAHVTDIFSLAVTPTQVLSASGASSIKIYSTTSPDMPLEQTLTGAHKL
GCHHIVTSRNGHVAASAGFGGEVKIWRISEAGEWAEDGKIVDGNNAGEIWAIALSEDGQF
LASTTYDGRINVWDVVDGRKKIREYETKGSFGMCIDMSRDGRFTASGHENGGVYVFNNDT
GRMLYSLPGLVMPVRTVAFSPAGTRLAAAGDARVIALYDVQHGEQVANLTGHSAWIFSVD
WSDTGEYLLSGAFDGKVKVWSIDQRTCVATHSETEKTLWSVKWLPKTGRSEAFATAGANR
SISFYREATGG
NT seq 936 nt   +upstreamnt  +downstreamnt
atgtcgaaacaatacctgacgacacacacggtcgacgatgctcatgtcaccgatattttc
tcgctcgcagtgactcccacccaggttctttctgcttccggtgcttcctccatcaaaatc
tattccacgacgtccccagacatgcctctagagcagaccttgaccggagcacataagctc
ggttgccaccacattgtgacttcacgcaacggacatgtcgccgcgagcgcaggcttcgga
ggtgaagttaagatatggagaatctctgaagcaggggagtgggcggaagatggcaagatc
gtggatggaaacaatgctggggaaatatgggcaattgctctgagtgaggacggacagttt
cttgccagcacaacctatgatggcagaatcaacgtctgggacgtggtcgacggaaggaag
aagatcagagaatatgagacgaagggaagctttggcatgtgtatcgacatgagcagggat
ggaagattcacagcaagtgggcatgagaatggcggagtgtatgtgttcaacaacgacaca
ggcaggatgctctactcattacccggccttgtgatgccggtccggacggtagcattctct
cccgcaggtacacgacttgctgccgctggagacgcccgtgttattgcattatatgatgtc
caacatggcgagcaagttgcaaaccttaccggtcactctgcatggatcttctcggttgac
tggagtgataccggagagtatctcctcagtggggctttcgatggaaaggtcaaagtctgg
tctattgatcaaagaacttgtgtggctacacatagtgagacagagaagaccctctggtct
gtcaaatggctaccgaagacaggaagaagtgaagcatttgctacggccggagccaacagg
agtatttcgttctacagagaagcaactggaggttag

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