Mollisia scopiformis: LY89DRAFT_656717
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Entry
LY89DRAFT_656717 CDS
T04865
Name
(RefSeq) HIT-like protein
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
psco
Mollisia scopiformis
Pathway
psco03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LY89DRAFT_656717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psco03400
]
LY89DRAFT_656717
Enzymes [BR:
psco01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
LY89DRAFT_656717
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
LY89DRAFT_656717
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
LY89DRAFT_656717
DNA repair and recombination proteins [BR:
psco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
LY89DRAFT_656717
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
LY89DRAFT_656717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2HE
DcpS_C
HIT
Gins51_C
Motif
Other DBs
NCBI-GeneID:
28822125
NCBI-ProteinID:
XP_018064448
JGI:
656717
UniProt:
A0A132BCW7
LinkDB
All DBs
Position
Unknown
AA seq
275 aa
AA seq
DB search
MAHETSKDAITEDEIAGTAPTASSSASPARNAFSALMAPKRKAAPPSPKPAKKKYNKDMR
DGLDDYILHPETYSSSRVIYYGSAFVAINDLYPKSSVHTLLLPRTEHKDMHPFDAFDDPA
FLAAVREQVKKLRHIVGKELQSRYGPYSKQDIPREKVLNGEVEPAEDGVLPVGRDWDKEV
MAGIHAHPSMNHLHVHVLSVDRYSECLKHRKHYNSFATEFFVPIEDFPLAKDDERRHGHD
LKQDMKCWRCGMNFGNKFAKLKEHLAEEFKEWRKE
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcacacgaaacatccaaagacgcgatcacggaggacgagattgcgggcacagcacct
acagcctcgtcgtcagcctcgcccgcccgcaacgcattctcagccctcatggcgccaaag
cggaaagctgcccctccaagcccaaaacctgcgaagaagaaatacaacaaagacatgcgc
gacggcctagacgattacatcctccatcccgaaacttactcctcctcccgcgtgatatac
tacggctccgcctttgttgctatcaatgacctctaccccaagtccagcgtacataccctc
cttctgccacgaacggaacataaggatatgcatccctttgacgcgttcgatgatcctgca
ttcttggctgcggtacgggaacaagtcaagaagctacggcatattgtgggcaaggaacta
caaagtagatatggaccatattctaaacaagacatcccccgagaaaaggtgctcaacggg
gaagtcgagcccgcagaagatggcgttctaccagttgggagggactgggacaaagaagtt
atggctggaatacatgctcatcctagcatgaatcatctacacgtccatgtcttgagtgta
gacagatattcagagtgcctgaaacatagaaagcattataatagctttgctacggagttc
tttgtgccgattgaggactttccgttggctaaggatgatgagcggagacatggacatgac
ttgaagcaggatatgaagtgttggaggtgtgggatgaattttgggaataagtttgccaag
ttgaaagagcatttggctgaggagttcaaggagtggaggaaagagtaa
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