KEGG   Mollisia scopiformis: LY89DRAFT_657854
Entry
LY89DRAFT_657854  CDS       T04865                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K11360  transcriptional activator SPT8
Organism
psco  Mollisia scopiformis
Brite
KEGG Orthology (KO) [BR:psco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psco03021]
    LY89DRAFT_657854
   03036 Chromosome and associated proteins [BR:psco03036]
    LY89DRAFT_657854
Transcription machinery [BR:psco03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     LY89DRAFT_657854
Chromosome and associated proteins [BR:psco03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     LY89DRAFT_657854
SSDB
Motif
Pfam: Beta-prop_SPT8 WD40 Beta-prop_EML_2 WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_2nd WD40_RFWD3 Beta-prop_HPS5 Beta-prop_TEP1_C Beta-prop_DCAF4 NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_NUP159_NUP214 Beta-prop_IFT122_1st PEP5_VPS11_N
Other DBs
NCBI-GeneID: 28822175
NCBI-ProteinID: XP_018063826
JGI: 657854
UniProt: A0A132BAQ8
LinkDB
Position
Unknown
AA seq 662 aa
MPGFSLDDDDRGSNNSSDNEQDELMEDAEDIEPDPDQDADADGDGDDDENDEDNGDEDQD
GGDDEDDGPEPSNRTRRPSLPTTNTSSDDTPIMSQVNGAGPTSHPRPVVTRTSASPRQPS
APLPSPKMRYEVRPEALTASEYDIVPTMAAPQSTSINAITATPDMRYWFTGGSDCYIRKY
DGVATVNGKTLLTVAQRHPFVDSVVKAGVLMSYWDNEEPNSKVQGEDPPLSPVYSLAVQS
QALWMLSGLESGCINLYSVRHDEGKRINFLHKHKSAVSVLTLAQDEKSVLSGSWDKNVFD
WDLNTGQIKRSFEGSGSQISAIEIRPASSLPVPEESGDPVPMNGTFSSNNDSKPLLNGLS
NGNHTNGEEGNEDAPGSPTDSLFGGGSDNNSLFGETAGDGAPSGGVFGDDDDEFSKAIES
SLDNQDHIDAQGDLTMGDAPADNESAPAVQQPESQMNGTKAEPSTQSNGSTQKAPETTTI
VAETQDAVATSDSTFLAASIDGTLQIWDRRQPNPVARIPTRTGVPPWCMAACWSPDGNFI
YAGRRNGTVEEFSLHKGLKNAERTFKFPQGSGAVSALRAMPNGRHLICASHDILRLYDLK
APQTNKHSTVPFLIVPGPPRAGVISALHVDPTCKYMLSAAGNRGWEGSTTEVLIGYEIGV
SP
NT seq 1989 nt   +upstreamnt  +downstreamnt
atgccaggcttctctctggatgatgatgaccgagggtctaacaatagctcggacaatgag
caggatgaattgatggaagatgcagaagatatcgaaccggatccagaccaagatgcagat
gcggatggtgatggagacgacgacgagaatgacgaggataatggagatgaggatcaagac
ggaggagacgacgaggatgatggccccgaaccttcaaatcgaactcgaagacctagcctt
cctacaaccaatacaagttcagacgatactcctataatgagtcaagtcaatggcgctggg
cctacatcacatcctagaccagttgttactcgaacatctgcctctcctcgacaaccatcc
gcacctctgccttcccccaagatgcgatacgaagtaaggcctgaagcccttactgcgtcc
gaatatgatattgtacctacaatggcagccccgcagagtacctctataaatgcaatcaca
gccactccagatatgagatattggttcactggaggatcagattgctacataaggaaatac
gatggagttgcaacagtcaatgggaagacacttttgactgtagctcaacgacatcccttc
gtggatagtgtggtcaaagctggtgttctgatgagctattgggataatgaggaaccgaat
tcgaaggttcagggcgaagatccaccactttcaccagtttattcgttagctgtacaatcg
caggcgttgtggatgctctctggactggaatcaggatgcatcaacctatactccgtacga
cacgatgaagggaagcgaataaacttcttgcacaagcataagtctgcggtctcagttctc
acgttggcccaggacgagaagtctgttttgtctggaagttgggataagaatgtgtttgat
tgggatctcaatactggacaaatcaagagatcatttgaaggaagtggaagtcaaatatct
gcgattgagatacggccagcttcgagtttaccagtgccagaagaatcgggagacccagta
ccgatgaatgggacattttcaagtaataacgatagtaaaccccttctgaacgggctatcg
aatggaaatcataccaatggagaagaaggcaatgaagatgctccaggatctcccacggac
tctttatttggaggaggaagtgacaacaattctttgtttggagagactgctggagatggt
gcaccttctgggggtgtatttggcgacgatgatgatgagttctcgaaagccattgagtca
agtctcgacaatcaagaccatattgatgcgcagggagacctcactatgggagatgcccca
gcagacaacgaatcagctccagctgtgcaacaaccagaaagccagatgaatggcacaaag
gctgaaccttctacacaatccaatggatctacccaaaaagctccagaaacgacaactatt
gttgctgaaacacaagacgctgttgcaacctctgattctacctttctagcagcttcgatc
gacggtactcttcagatctgggatagacggcagccgaatcctgttgcgagaatacctaca
aggaccggtgtgcctccatggtgcatggctgcatgttggtctccagatggcaacttcatt
tatgctgggcgaagaaatggaacggttgaagaatttagtttacataaaggtttgaagaac
gcagagaggactttcaaatttcctcaaggtagtggtgctgttagtgctcttcgggcaatg
cccaatgggcggcatttgatatgtgcttcacatgatattcttcgtctctatgatctcaag
gcccctcaaacgaacaagcattcaactgtaccattcctcattgttcctggtccgccgaga
gcaggagtcatcagcgctttgcatgttgatccgacttgcaaatacatgctttctgcagct
ggaaatcgaggatgggagggaagcacgaccgaagtacttattggatacgagattggagtt
tcgccttga

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