Mollisia scopiformis: LY89DRAFT_658927
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Entry
LY89DRAFT_658927 CDS
T04865
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein-like protein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
psco
Mollisia scopiformis
Pathway
psco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LY89DRAFT_658927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psco03041
]
LY89DRAFT_658927
Spliceosome [BR:
psco03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
LY89DRAFT_658927
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_WDR75_1st
PRP4
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_Vps41
WDR54
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_1st
Beta-prop_DCAF12
RM44_endonuclase
Motif
Other DBs
NCBI-GeneID:
28822222
NCBI-ProteinID:
XP_018062896
JGI:
658927
UniProt:
A0A132B848
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MPSAGPGLAPERASAFQEQMDRRRREAQIVVPTDDERVRARLREIGQPITLFGEDKALRR
DRLRKLLAIEAEINAAEEEDGDEEMRDAADEQNEQEEEFYTKGSQDLVECRKRIARYSLP
RAKKRLMVQKVEATIPLRTHVKFRKAIRERLQGFELQGSQTAGERPVSITRFSPNGEIIA
AGNWGGGIKLLNVPGLDVIRTLRGHTDRVGGVSWYPDATLPGSTVSPDSVNLASGGAEGK
VHLWSLNKDTPISTLEGHNQRVCRVEFHPSGQYLASASEDTTWRLWDVETSTELLLQEGH
SRGVFTVAFNTDGSLLASAGMDSIGRIWDLRTGRTVMILEGHIKPIYTLDWGSDGHRVLS
GSGDGWVKCWDVRKVQPVGGIGAHKSVVSDLRWYKGQDDPSTGTIPELDEQGARRPKNSG
TFFVSGGFDKNVNIFSADDWSLVQSLSGHTGNVHSVDVSRDARWIVSGGYDRTVKLWGRN
DGLGL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgccctctgcaggcccgggcctggctcccgagcgagcttcggctttccaggagcagatg
gataggaggaggagagaggcgcagattgtggtgcctacagatgacgagagagtgcgagca
cgacttagggagattgggcagcctataacgttattcggggaagataaagcgcttcgacga
gacagattacggaagctcctcgcgatagaagccgagatcaacgcagcagaagaagaagat
ggcgacgaggaaatgcgagacgcggcagacgagcagaacgagcaggaagaagagttctat
accaaaggctcgcaggacttggtggagtgcaggaagcggatcgcgaggtactcgttgccg
agagcgaagaagcggcttatggtgcaaaaggtcgaggctacgattccgttacggacgcac
gtcaagttcaggaaggcgatcagggagcgtctgcaagggtttgagcttcagggaagtcag
actgctggagaacgacccgtgagcataacacggttctcgcccaacggggaaatcatcgct
gctggaaattggggaggtggcatcaagctgcttaatgttccaggtctcgatgtcatacgt
actcttcgtggacatacggatcgagttggcggagtctcgtggtacccagatgctacactt
ccaggcagtacagtctcaccagactccgtcaatcttgcatcaggaggcgcggagggaaaa
gtgcacttgtggtctctgaacaaagatactccaatctctactttagaaggtcacaaccag
cgagtttgccgagtcgagttccacccctcaggtcaatacctagcttcagcatcggaagat
actacatggcggctctgggacgtggagacatccaccgaactccttctccaagaaggtcat
tctcgaggtgtgttcacagttgctttcaatacagatggttctctactcgccagtgccgga
atggatagcataggtcgcatctgggatctccgcacaggacgcacagtaatgatcctcgaa
ggccatatcaagcccatctacactctcgactggggctctgacggccaccgcgtcctttcc
ggctccggcgacggctgggtcaagtgctgggacgtccgcaaagtgcaaccagtgggcgga
atcggcgctcacaaatccgtcgtctcggatcttcgctggtataaaggccaagacgaccct
tcgacaggcactattcccgaactcgacgagcaaggtgcgaggaggccgaagaattcgggg
accttcttcgtctcgggggggtttgacaagaatgttaatatcttctcggcggacgattgg
agcttggtgcagagcttgagtgggcatacggggaatgtgcatagtgtggatgtgtcgagg
gatgcgaggtggattgttagtggtggttatgacaggacggtgaagctttgggggaggaat
gatgggttgggattgtga
DBGET
integrated database retrieval system
