Mollisia scopiformis: LY89DRAFT_664657
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Entry
LY89DRAFT_664657 CDS
T04865
Name
(RefSeq) RNA-binding domain-containing protein
KO
K12881
THO complex subunit 4
Organism
psco
Mollisia scopiformis
Pathway
psco03013
Nucleocytoplasmic transport
psco03015
mRNA surveillance pathway
psco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LY89DRAFT_664657
09122 Translation
03013 Nucleocytoplasmic transport
LY89DRAFT_664657
03015 mRNA surveillance pathway
LY89DRAFT_664657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psco03019
]
LY89DRAFT_664657
03041 Spliceosome [BR:
psco03041
]
LY89DRAFT_664657
Messenger RNA biogenesis [BR:
psco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
LY89DRAFT_664657
TREX complex
LY89DRAFT_664657
Spliceosome [BR:
psco03041
]
Complex C
Other components
EJC/TREX
LY89DRAFT_664657
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
LY89DRAFT_664657
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
28822518
NCBI-ProteinID:
XP_018077230
JGI:
664657
UniProt:
A0A194XRF8
LinkDB
All DBs
Position
Unknown
AA seq
345 aa
AA seq
DB search
MDRALDEIVAERHRGGGRARGPGRRGGRRNERTEYPRDGVRKILFQLASRINTALVDDAS
RGGAENRLEKIAEILTQNGFMISLTTIVRVFDGLFGNISLTILPAGRRSVRQDRRYSPEP
VYETSSAKLRVENLHYDLTEEDLDDLFNRIGPVLKLSLTYDRAGRSEGVAYVTYESSYDA
KKAIREFDGANAKGQPIRLVPIPSGPSAGRRNPAPAATRGSLFDRITPRARSDSPIRHSD
VSGPPPSNVDRYVPGRGSRSRSPRRTAPKRDGRRPGARRERGERTGGGGGGRGGERLAKD
GRPRKTQEELDAEMEDYFGGGGGRENGASEVTEAKGDDVDMLEIL
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggatcgagcactcgacgagattgttgccgagcgacaccgaggcggtggacgagctcga
ggcccaggccgtcgcggtggtcgcagaaatgagcgcaccgagtatcctcgtgacggcgta
agaaagatcctcttccagctagctagtcgaatcaataccgcgcttgttgatgatgcttct
cgaggcggtgcagagaatcgactcgagaagatagcagaaatattgactcagaatgggttc
atgataagtttgacgacaatagtacgagtctttgatggtctgtttggcaacatttcgctc
acgattcttccagccggacgacgatctgttcgtcaagatagacgttactctccggagcct
gtctacgagaccagcagcgcaaagctccgagttgagaacctccactacgatttaaccgaa
gaggatttggatgatctcttcaaccgaatcggtcctgtccttaagctttccctcacctac
gacagagccggccgctccgagggcgttgcatatgtcacgtacgaatcctcctacgatgct
aagaaagcaattcgagaatttgatggtgccaatgccaaaggtcaacctatccgtctagtc
cctattccctctggtccttcagccggtcgcagaaacccagctccagctgctacccgaggc
tccctgtttgatcgcattaccccacgtgcccgttccgattccccaatccgccattcagac
gtcagtggtcctcccccatcaaacgttgatcgttacgtcccaggccgaggtagtcgttcc
cgtagtccccgacgaaccgccccgaaaagagatggtcgtcgtcctggtgctagacgtgag
agaggtgaacgaaccggcggtggcggtggaggacgaggtggtgagagattggccaaggat
ggtagaccaagaaagacacaggaggaattagatgccgagatggaggattactttggtgga
ggaggtggcagggagaatggtgcatctgaagtcacggaagccaagggagatgatgttgat
atgttggagatcttgtag
DBGET
integrated database retrieval system
