Mollisia scopiformis: LY89DRAFT_678466
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Entry
LY89DRAFT_678466 CDS
T04865
Name
(RefSeq) protein prenylyltransferase
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
psco
Mollisia scopiformis
Pathway
psco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LY89DRAFT_678466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psco03019
]
LY89DRAFT_678466
03041 Spliceosome [BR:
psco03041
]
LY89DRAFT_678466
Messenger RNA biogenesis [BR:
psco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
LY89DRAFT_678466
Spliceosome [BR:
psco03041
]
Complex B
Other components
Prp19-related factors
LY89DRAFT_678466
Complex C
LY89DRAFT_678466
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_8
Mad3_BUB1_I
TPR_15
ARM_TT21
RPN7
NRDE-2
Motif
Other DBs
NCBI-GeneID:
28823472
NCBI-ProteinID:
XP_018061240
JGI:
678466
UniProt:
A0A132B3A4
LinkDB
All DBs
Position
Unknown
AA seq
828 aa
AA seq
DB search
MAAPIVAKSKLSRATADLYLISEEDTIYEQDILREPGSTKPWLAYIEFKFQHGNPQEQAF
VLERACKQLPRSYKLWKMYLDLRIKHLGKLNPAIFASEYNKVNALFERALILLNKMPRIW
EMYLSFLLQQPVVTLTRHTFDRALRALPITQHNRIWALYRPFANSASGQTAVKIWRRYMQ
IHPEDAEDFLELLIEMRHYTEAVKEYMKILNNQKFRSKNGKGHYQLWSEMVDLLVEHANE
IDTGDEIGIDVERIIRSGIDRFADQRGKLWSGLATYWITRGSFERARDIFEEGITTVMTV
RDFTLVFDSYVEFEEAITGTLMEEAAARSEKGVVNENADFDLDIRMMRFEQLMDRRPFLI
NDVLLRQNPNNVSEWNVRIGLWGDNKQEVVQTYTDAIAAVQPKKAVGRFHELWANYAKFY
EKGGDLRNARVIMEKAVKVPFKSVAELADMWTEWAEMELRNDHFEEAVKIMAKAVQAPKR
STVDYFDETLSPQQRVHKSWKLWSLYVDLVESVSTLEETKKIYERIFELRIATPQTVVNY
ANLLEENKYFEESFKIYERGLDLFSYPVAFELWNLYLTKAVDRKIGIERLRDLFEQAVEG
CPPKFAKVLYLMYGNLEEERGLARHAMRIYERATRAVSDEDRADMFNFYITKSASNFGLP
STRPIYERAIAALPDKDARDMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTSPSFWQK
WEAFEVQHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQALARSKEQGDGEVDEESADAMA
ALEREARAPVGFVAASDGPQGGNIKEAVPVVAANPDAIDVDGMDDDDE
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggctgccccaatcgtcgcgaagtccaagctatcccgagcaaccgcagatttatacctt
atttctgaagaagatacaatctacgagcaggatatccttcgagaaccaggcagtacgaag
ccatggcttgcgtacatcgagttcaaatttcaacatggaaaccctcaggagcaagctttc
gtgcttgaacgagcttgtaaacagctgcctcggtcgtacaagctttggaaaatgtatctg
gatctccgaatcaaacatctaggaaagctaaatccggccatttttgcttccgaatataac
aaagtcaatgctctcttcgaacgcgccttgatcctgctcaacaagatgccaagaatatgg
gaaatgtatctgtcattcttattacagcagccggttgtcaccctcacccgccatacgttc
gaccgagccctccgcgctttaccaatcactcaacacaatcgcatttgggccttgtatcgt
ccatttgcaaattcggcatcaggtcaaactgcagtcaagatttggcggcgatatatgcag
attcatccagaagacgcggaggacttcctcgagctactgattgagatgcgccattacacc
gaagccgtcaaagaatacatgaagattttgaacaatcaaaagtttcgcagtaagaatggc
aagggacattaccagctctggagcgagatggttgaccttcttgtcgagcatgcaaacgaa
atcgatactggcgatgaaattggtatcgatgttgaacggatcattcgaagtggaatcgac
cggtttgcagatcagcgaggcaagctgtggtcgggcctggccacatattggatcacaagg
ggaagttttgaacgggctcgagatatctttgaggaaggtattactaccgtcatgaccgtc
agagacttcacactcgtcttcgattcatatgttgaatttgaggaagcgatcacgggaacc
ttgatggaggaagctgcagctcgttctgaaaagggcgtcgtgaatgagaatgccgacttc
gatttggacatccgcatgatgaggttcgagcagcttatggacagacgaccattcctcatt
aatgacgtcctgcttcgacaaaaccccaataacgtttcagagtggaacgtcagaattgga
ttgtggggtgacaacaagcaagaagtggtccaaacatataccgacgcgattgctgctgtg
caaccaaagaaggcagtgggccgatttcacgaattatgggctaattacgccaagttttat
gagaaaggcggggatctccgcaatgcaagggtcattatggagaaagcggtgaaagtgcct
tttaagtcggtagctgagctggctgatatgtggactgaatgggctgaaatggagttgaga
aatgatcacttcgaagaagcagtcaaaatcatggccaaagcagtacaagcacccaaacga
tcaactgtcgactatttcgacgagacattgtcgccccagcaacgagtgcacaagagctgg
aagctctggagtttatatgtggatctcgtagagagcgtcagtaccctcgaggaaacgaag
aagatctacgagcgcatattcgagctacgcatcgccactccgcagactgtcgtcaactat
gccaatcttctagaagagaacaagtatttcgaagaatcgttcaagatctacgagagaggc
ttggacctattcagctatccagtagccttcgagctctggaacttgtacctcacaaaggcc
gtagaccgaaagattggtatcgaacgccttcgcgatctcttcgaacaagctgttgaagga
tgtccacccaagttcgcgaaggtcttgtaccttatgtatggtaacctcgaagaagaacgt
ggcctcgcgagacatgccatgcgtatttacgagcgagcaactcgagcagtctccgatgaa
gatcgcgcagacatgtttaacttctacatcaccaaatcagcctccaacttcggccttcca
tccactcggcctatctacgaacgagccattgctgcccttccggacaaggatgcgagagac
atgtgcctcaaattcgctgacatggagaagcggctgggagaaatcgaccgtgcgagagct
atctacggacatgcatctcaattctgtgatcccagaactagtccctctttctggcaaaaa
tgggaagctttcgaagttcaacacggaaacgaggatactttcaaagagatgctgcgtatc
aagagaagtgtacaggctcagtataatactgatgtcaacttcattgcctcccaagctttg
gctaggagcaaggaacagggtgatggcgaggtggatgaagagtctgccgatgccatggct
gctcttgagagagaggctagggctcctgttggtttcgtggctgctagtgatggtccgcag
ggtggaaatatcaaggaggctgtgcctgttgtggctgcgaatcccgacgcgattgacgtt
gatggaatggatgatgatgacgaatga
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