KEGG   Mollisia scopiformis: LY89DRAFT_678466
Entry
LY89DRAFT_678466  CDS       T04865                                 
Name
(RefSeq) protein prenylyltransferase
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
psco  Mollisia scopiformis
Pathway
psco03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LY89DRAFT_678466
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psco03019]
    LY89DRAFT_678466
   03041 Spliceosome [BR:psco03041]
    LY89DRAFT_678466
Messenger RNA biogenesis [BR:psco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     LY89DRAFT_678466
Spliceosome [BR:psco03041]
 Complex B
  Other components
   Prp19-related factors
    LY89DRAFT_678466
 Complex C
    LY89DRAFT_678466
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf TPR_8 Mad3_BUB1_I TPR_15 ARM_TT21 RPN7 NRDE-2
Other DBs
NCBI-GeneID: 28823472
NCBI-ProteinID: XP_018061240
JGI: 678466
UniProt: A0A132B3A4
LinkDB
Position
Unknown
AA seq 828 aa
MAAPIVAKSKLSRATADLYLISEEDTIYEQDILREPGSTKPWLAYIEFKFQHGNPQEQAF
VLERACKQLPRSYKLWKMYLDLRIKHLGKLNPAIFASEYNKVNALFERALILLNKMPRIW
EMYLSFLLQQPVVTLTRHTFDRALRALPITQHNRIWALYRPFANSASGQTAVKIWRRYMQ
IHPEDAEDFLELLIEMRHYTEAVKEYMKILNNQKFRSKNGKGHYQLWSEMVDLLVEHANE
IDTGDEIGIDVERIIRSGIDRFADQRGKLWSGLATYWITRGSFERARDIFEEGITTVMTV
RDFTLVFDSYVEFEEAITGTLMEEAAARSEKGVVNENADFDLDIRMMRFEQLMDRRPFLI
NDVLLRQNPNNVSEWNVRIGLWGDNKQEVVQTYTDAIAAVQPKKAVGRFHELWANYAKFY
EKGGDLRNARVIMEKAVKVPFKSVAELADMWTEWAEMELRNDHFEEAVKIMAKAVQAPKR
STVDYFDETLSPQQRVHKSWKLWSLYVDLVESVSTLEETKKIYERIFELRIATPQTVVNY
ANLLEENKYFEESFKIYERGLDLFSYPVAFELWNLYLTKAVDRKIGIERLRDLFEQAVEG
CPPKFAKVLYLMYGNLEEERGLARHAMRIYERATRAVSDEDRADMFNFYITKSASNFGLP
STRPIYERAIAALPDKDARDMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTSPSFWQK
WEAFEVQHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQALARSKEQGDGEVDEESADAMA
ALEREARAPVGFVAASDGPQGGNIKEAVPVVAANPDAIDVDGMDDDDE
NT seq 2487 nt   +upstreamnt  +downstreamnt
atggctgccccaatcgtcgcgaagtccaagctatcccgagcaaccgcagatttatacctt
atttctgaagaagatacaatctacgagcaggatatccttcgagaaccaggcagtacgaag
ccatggcttgcgtacatcgagttcaaatttcaacatggaaaccctcaggagcaagctttc
gtgcttgaacgagcttgtaaacagctgcctcggtcgtacaagctttggaaaatgtatctg
gatctccgaatcaaacatctaggaaagctaaatccggccatttttgcttccgaatataac
aaagtcaatgctctcttcgaacgcgccttgatcctgctcaacaagatgccaagaatatgg
gaaatgtatctgtcattcttattacagcagccggttgtcaccctcacccgccatacgttc
gaccgagccctccgcgctttaccaatcactcaacacaatcgcatttgggccttgtatcgt
ccatttgcaaattcggcatcaggtcaaactgcagtcaagatttggcggcgatatatgcag
attcatccagaagacgcggaggacttcctcgagctactgattgagatgcgccattacacc
gaagccgtcaaagaatacatgaagattttgaacaatcaaaagtttcgcagtaagaatggc
aagggacattaccagctctggagcgagatggttgaccttcttgtcgagcatgcaaacgaa
atcgatactggcgatgaaattggtatcgatgttgaacggatcattcgaagtggaatcgac
cggtttgcagatcagcgaggcaagctgtggtcgggcctggccacatattggatcacaagg
ggaagttttgaacgggctcgagatatctttgaggaaggtattactaccgtcatgaccgtc
agagacttcacactcgtcttcgattcatatgttgaatttgaggaagcgatcacgggaacc
ttgatggaggaagctgcagctcgttctgaaaagggcgtcgtgaatgagaatgccgacttc
gatttggacatccgcatgatgaggttcgagcagcttatggacagacgaccattcctcatt
aatgacgtcctgcttcgacaaaaccccaataacgtttcagagtggaacgtcagaattgga
ttgtggggtgacaacaagcaagaagtggtccaaacatataccgacgcgattgctgctgtg
caaccaaagaaggcagtgggccgatttcacgaattatgggctaattacgccaagttttat
gagaaaggcggggatctccgcaatgcaagggtcattatggagaaagcggtgaaagtgcct
tttaagtcggtagctgagctggctgatatgtggactgaatgggctgaaatggagttgaga
aatgatcacttcgaagaagcagtcaaaatcatggccaaagcagtacaagcacccaaacga
tcaactgtcgactatttcgacgagacattgtcgccccagcaacgagtgcacaagagctgg
aagctctggagtttatatgtggatctcgtagagagcgtcagtaccctcgaggaaacgaag
aagatctacgagcgcatattcgagctacgcatcgccactccgcagactgtcgtcaactat
gccaatcttctagaagagaacaagtatttcgaagaatcgttcaagatctacgagagaggc
ttggacctattcagctatccagtagccttcgagctctggaacttgtacctcacaaaggcc
gtagaccgaaagattggtatcgaacgccttcgcgatctcttcgaacaagctgttgaagga
tgtccacccaagttcgcgaaggtcttgtaccttatgtatggtaacctcgaagaagaacgt
ggcctcgcgagacatgccatgcgtatttacgagcgagcaactcgagcagtctccgatgaa
gatcgcgcagacatgtttaacttctacatcaccaaatcagcctccaacttcggccttcca
tccactcggcctatctacgaacgagccattgctgcccttccggacaaggatgcgagagac
atgtgcctcaaattcgctgacatggagaagcggctgggagaaatcgaccgtgcgagagct
atctacggacatgcatctcaattctgtgatcccagaactagtccctctttctggcaaaaa
tgggaagctttcgaagttcaacacggaaacgaggatactttcaaagagatgctgcgtatc
aagagaagtgtacaggctcagtataatactgatgtcaacttcattgcctcccaagctttg
gctaggagcaaggaacagggtgatggcgaggtggatgaagagtctgccgatgccatggct
gctcttgagagagaggctagggctcctgttggtttcgtggctgctagtgatggtccgcag
ggtggaaatatcaaggaggctgtgcctgttgtggctgcgaatcccgacgcgattgacgtt
gatggaatggatgatgatgacgaatga

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