KEGG   Mollisia scopiformis: LY89DRAFT_679613
Entry
LY89DRAFT_679613  CDS       T04865                                 
Name
(RefSeq) histone deacetylase
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
psco  Mollisia scopiformis
Pathway
psco03082  ATP-dependent chromatin remodeling
psco03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:psco00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    LY89DRAFT_679613
   03083 Polycomb repressive complex
    LY89DRAFT_679613
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:psco03036]
    LY89DRAFT_679613
Enzymes [BR:psco01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     LY89DRAFT_679613
Chromosome and associated proteins [BR:psco03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     LY89DRAFT_679613
   HDAC complexes
    Sin3A-HDAC complex
     LY89DRAFT_679613
    BRAF-HDAC complex
     LY89DRAFT_679613
    REST complex
     LY89DRAFT_679613
    SHIP complex
     LY89DRAFT_679613
    MiDAC complex
     LY89DRAFT_679613
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     LY89DRAFT_679613
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    LY89DRAFT_679613
  Chromatin remodeling factors
   NuRD complex
    LY89DRAFT_679613
SSDB
Motif
Pfam: Hist_deacetyl SENP3_5_N
Other DBs
NCBI-GeneID: 28823638
NCBI-ProteinID: XP_018078833
JGI: 679613
UniProt: A0A194XW62
LinkDB
Position
Unknown
AA seq 547 aa
MTSSFAPLDPPAGDGPSSKKRVAYFYDSDVGNYAYVAGHPMKPHRIRLAHSLIMNYGTYN
KMEIYRAKPATRHEMTQFHTDEYIDFLQKVTPDNMDSFSKEQGKYNVGDDCPVFDGLFEF
CGISAGGSMEGAARLNRGKCDIAINWAGGLHHAKKSEASGFCYVNDIVLGIIELLRFKKR
VLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGELRDIGVGQGKNYAVNFPLR
DGIDDVTYKSIFEPVIKAVMDYYQPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVSYVK
SFNLPTLVLGGGGYTMRNVARTWAYETGVLVGQELDRILPFNEYYEYYGPDYELDVRASN
MENANSRDYLEKIKTQVIENLKKTAHAPSVQLTEVPRTTLAGTTDEDDDILDDEDEDMNK
DVRTTKRRWDQRVTRDDELDESEDEEESKANGVVAAKEGPKRRNVSAGPDVEMGSPSPVP
EAGSSKVPEPEPTEQLEVEMEKAPETAPVEKSSAAVESSSTDVTMADAPTEAVEPETKTE
PGTTAEE
NT seq 1644 nt   +upstreamnt  +downstreamnt
atgacttcctccttcgcccctctcgacccaccagctggggatggtcccagtagcaagaag
agagtggcttacttctacgattccgatgttggaaactacgcctatgtcgcaggtcatcct
atgaaacctcatcgaattcgattggcacacagcttgatcatgaactatggcacttacaac
aagatggagatttatcgcgcgaagcctgccacacgtcatgaaatgacccaattccacact
gatgaatacatcgactttcttcaaaaggtcacccctgataatatggactcattctcgaaa
gagcaaggcaaatacaatgtcggtgacgattgtccagtcttcgacgggcttttcgagttc
tgcgggatcagcgctggtggtagcatggagggagctgcgcgtctgaatcgtggcaaatgc
gatatcgccatcaactgggctggaggtctccatcacgcgaagaagagtgaagcaagtggt
ttctgctatgtcaatgacattgttcttggtataatcgagctcctgcgattcaagaagaga
gtcctctacattgatattgacgtccaccatggagatggcgttgaagaggcattctatacc
actgatcgagttatgactgtgtcattccacaagtatggtgaatacttcccgggaactggc
gagcttcgagacattggtgttggccaaggcaagaactatgctgtcaacttcccactacga
gatggaattgatgatgtgacctacaagtccatcttcgagcctgtcatcaaagccgtcatg
gattactaccaaccagaagctgttgtcttgcaatgcggtggagatagcttgtctggtgat
cgtctcggttgcttcaatctcagcatgagaggacatgccaattgtgtctcctatgtcaag
agcttcaatcttccaactcttgtacttggtggcggtggatataccatgcgaaacgtcgct
cgaacatgggcctacgagactggtgttctagttggtcaggaattggatcgtatcttgcct
ttcaatgaatactatgagtattatggccctgactatgagcttgatgtccgtgcttcgaat
atggagaatgccaactcgagagactacctggagaagatcaagactcaagtcattgagaat
ttgaagaagactgcccatgcgccatctgttcaattgaccgaagttcctcgcacaactctt
gcaggtactacagatgaggatgatgacattctggacgacgaagacgaggacatgaacaag
gatgttcgaactaccaagcgacgatgggatcaacgagtcaccagagatgatgagttggat
gaaagtgaggacgaggaagagtctaaggcaaatggagtcgttgcagccaaggaaggacca
aagcgccgaaacgtcagtgctggtccagatgttgagatgggaagtccttcaccagttcca
gaagcaggatcttccaaagtccccgagccagagcctacagagcaactagaagtagagatg
gagaaagcaccggaaaccgcgccagtcgaaaagtcatcagccgcagtagagtcttctagc
accgacgtcactatggcagatgctccaacagaagctgtagagcctgagacgaagactgag
ccaggtactacggcagaggaataa

DBGET integrated database retrieval system