Mollisia scopiformis: LY89DRAFT_680353
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Entry
LY89DRAFT_680353 CDS
T04865
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit PAN3
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
psco
Mollisia scopiformis
Pathway
psco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LY89DRAFT_680353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psco03019
]
LY89DRAFT_680353
Messenger RNA biogenesis [BR:
psco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
LY89DRAFT_680353
mRNA degradation factors
3'-5' decay
Pan complex
LY89DRAFT_680353
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
MSP1_C
Motif
Other DBs
NCBI-GeneID:
28823788
NCBI-ProteinID:
XP_018077989
JGI:
680353
UniProt:
A0A194XUC0
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MASARFGAPELRKPAGSPKPKGRENAKDTMCRNVVIYGHCRYEDQGCIFNHDMNKTSTSQ
IDAKKALNVDSPSFTPGTLSVPGKISSHAANAAPFTPRGLVSGTATPNSQAEPETNTFNI
AEIKEFTPRTFDASQALGSNGNTADQVSYDPFSMQNLNQTMPAGAYNPYLEDSNIPTNAA
NYFQAQTAFAAPAQPLQYHHYAPIGPHKEDLLAYQRLAHDFFIPNDLREELQKKSEATRQ
VMPNSQLPVVDHYHTLVPLDTNHHKNATVFGYPSWVYKAVSSKNGYTCVLRRIEGFRLSN
ERAIQQVRLWKRAIDNGGVVSVIDAFTTRAFGDSSLIFVYDYHPMSKTLVEQHAPATTRY
GNRAASTHPKEHVLWGYIVQIASAIKAVHEGQLAVRCMDPSKVLVTETNRVRLGACGILD
VTRFELDNRTMAEHQQDDFILFGRLILAVASNNMSLASVNVPLKGAVDLLNRTYSSEFKD
TITWLLTPAQPPATKDFNDFLRGISGHVMSSFSNSLHANDTLTSHLSRELENGRLFRLIA
KLGTINERPEYEGNPKWSDVGDRYILKLFRDYVFHQVNAEGRPVVNMGHILECMNKLDAG
STQQIKLVSRDEQDCFIVSYKELKKQVEAAFQELIKPESTKRY
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgcaaggtttggtgctccagagttgcggaagccggcgggctccccgaaacca
aaaggacgagagaacgcgaaggatactatgtgtcgcaatgttgtgatttatggacattgc
cgctatgaagaccaaggttgcatattcaatcatgatatgaacaagacatcgacttctcag
atagatgcaaaaaaagcgttgaacgtcgattccccttcctttacaccaggaactttgtca
gttccagggaaaatctcttcacacgcagctaatgctgcaccatttacaccacgtggactc
gtcagtggtactgccactcccaattcccaggctgaacctgaaacaaatactttcaacatt
gcagagatcaaagaattcactccaaggaccttcgatgcttcacaggctctaggatccaac
ggcaacactgctgaccaggtttcctatgacccattctccatgcagaacttgaatcaaacc
atgcctgctggcgcctataatccatatctagaagacagcaatatcccaaccaatgctgca
aattactttcaagctcagaccgctttcgcggctcctgctcaacctctccaatatcaccac
tacgcacctattggtccacacaaagaggatcttctcgcataccaaagacttgctcacgat
ttcttcattcccaatgatcttcgcgaagaacttcagaagaagtccgaggccactcgtcag
gtcatgccaaactcccaactacccgttgttgaccattatcacactttggtacctttagat
acgaatcatcacaagaatgccaccgtttttgggtatcccagctgggtctacaaggctgtt
tctagcaagaatggctacacctgtgtgttgaggagaatcgaagggttccgcttgagcaac
gagcgagctattcaacaagtccgactctggaagcgggcaatcgataatggtggcgttgtg
tcggttatcgatgcatttaccacaagagcgtttggtgatagctctctcatattcgtctac
gattaccatccaatgtcaaagaccttggtcgaacaacatgcgccagcgaccaccagatac
ggcaatcgtgctgcgagtacgcaccccaaagaacatgtactttggggatacattgttcag
attgcctctgctatcaaagccgtccatgaaggtcaactcgctgttcggtgtatggatcct
agcaaagtcctcgtcactgagaccaatcgtgttcggcttggtgcttgtggcatccttgat
gttacacgattcgaattggacaatagaacaatggcagaacaccagcaagatgactttatc
ctttttggaagactgatcttggcagttgcttccaacaacatgagtctggcttctgtcaac
gtaccactgaagggtgcagttgatctccttaatcgaacatacagctctgagttcaaggat
accatcacttggctgctgactccagcacaaccacctgccacaaaggacttcaacgacttc
cttcgtgggatctccggccatgttatgtcgtctttcagcaattctttgcacgcgaacgac
acattgacctcacatttgtccagagagctagagaacggtagactcttccgtttgattgcc
aagcttggtacgatcaacgagcgccccgagtacgaaggaaatccaaagtggagcgatgtt
ggcgaccgttacatcttgaagttattccgagattatgtcttccatcaagtgaacgcagag
ggcagaccagttgttaatatgggacacatcctcgagtgtatgaataagcttgatgctgga
agtactcagcaaatcaagctagttagcagagacgagcaagattgctttatcgtctcgtat
aaggagttgaagaagcaagttgaggcggctttccaagagttgatcaaaccagaatctacg
aagagatattag
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