KEGG   Mollisia scopiformis: LY89DRAFT_680555
Entry
LY89DRAFT_680555  CDS       T04865                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
psco  Mollisia scopiformis
Pathway
psco03018  RNA degradation
psco03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LY89DRAFT_680555
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LY89DRAFT_680555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psco03019]
    LY89DRAFT_680555
   03041 Spliceosome [BR:psco03041]
    LY89DRAFT_680555
Messenger RNA biogenesis [BR:psco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     LY89DRAFT_680555
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     LY89DRAFT_680555
Spliceosome [BR:psco03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    LY89DRAFT_680555
SSDB
Motif
Pfam: LSM SM-ATX LSM14 DUF6263
Other DBs
NCBI-GeneID: 28823825
NCBI-ProteinID: XP_018076767
JGI: 680555
UniProt: A0A194XRQ6
LinkDB
Position
Unknown
AA seq 82 aa
MENGNTTQAEGKDPSAFLSQIIGNSVTVKLNSGVIYKGELQSVDGYMNLALEKCEEHIDG
AKKRCYGDAFLRGNNVMYISAD
NT seq 249 nt   +upstreamnt  +downstreamnt
atggagaacggcaacaccacacaagctgagggtaaggacccgtcagcattcctgagtcaa
atcatcggaaactcagtgactgtaaaactgaacagcggagtgatctacaaaggagaattg
caaagtgttgatggctacatgaatctggcgctcgagaaatgcgaggaacatatcgatggg
gcgaagaagaggtgctacggggatgctttcctgcgaggcaataatgtcatgtacatctcg
gcggactga

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