KEGG   Mollisia scopiformis: LY89DRAFT_685449
Entry
LY89DRAFT_685449  CDS       T04865                                 
Name
(RefSeq) Rad4-domain-containing protein
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
psco  Mollisia scopiformis
Pathway
psco03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LY89DRAFT_685449
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psco03400]
    LY89DRAFT_685449
DNA repair and recombination proteins [BR:psco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      LY89DRAFT_685449
SSDB
Motif
Pfam: BHD_3 Rad4 BHD_2 BHD_1
Other DBs
NCBI-GeneID: 28824814
NCBI-ProteinID: XP_018070849
JGI: 685449
UniProt: A0A194X8Q4
LinkDB
Position
Unknown
AA seq 1161 aa
MPPFLPRKRLRSPTPEPGPSRPAPAKSKGKGKAVTTTPRKPTLFDDLDAGTGTRRSAEHG
KAMLEKLAATSDDESSLSSLSDEEFEDVPNAKRQKISAAEEDDDEDEDIEFEDVDTNVAP
GASANISTGDLELTLTKDTRISITNPFGTKKGPSKIERGIRVDTHKMHVQFLMWHNAVRN
GWCCDKEVQEILVKQLPKTLLEAVEKWKRDSGLEVKEDREDGIPKGKGKGKGKTKDTKTT
KGEQANSRRQSDWAASARPTAEGQVNMSAGDPLFNLLEKLRRYWKSQFRITAPGLRKLGY
MSLQRLDKASKTFKENYDPERHGERIRNIKEFRACAQIMEGSRDVGAQLFTALLRVLGLE
TRLVASLQPAGFGWSASEEASKSNPRRLKKSNAADDSSDEETSAEEEEVQPLPQPISKPA
KKAKAPTKSKAKTIPKPLDLDEEASFVEEEEAPVPKSVRKGKTAGKSASKPSRRTSRGNG
LKNAPIDLSDSEAAVDEEDDDSVIDITPAKQVRATSLSYDKDLPFPHYWSEVLSPVTNTY
TPVDAVVLHLVGTGRETIEKFETRGVAADKGKQVTAYIIGHSSDGTAKDVTTRYLKKHVW
PGRTKGYRYPAEKIAIRNRHGKIKRYEEYDWFKTVMSSYVRGTRKCPRTDIDDYEEATDL
KRVKPEKKEVEEGKETLQYYKSSPEFVLERHFKREEALVPTAKHVKMFTIKGKGEVTTDE
KVYLRKDVVNCKSIETWHKEGRAPKDGEEPLKRVPYRAATTNRRRELAEAENASGEKVLQ
GLYSWDQTDWIIPPPIENGIIPKNNFGNIDLYVDSMLPEGAVHLPMRGTVKICKRLGIDY
AEAVTGFEFGHRMAVPVITGVVVAEEHYETMMDEWHKDEAERVRKEDEKRRKAALGLWRK
MLMGLRIIERFKEERGDGDDDTDVLNPFANKKKRTEDAEAEAQKKIMDQRDEEMAGGFLP
EGFETEEPEERHPSFFPVVQEHDDEEEEGGGFVVEGHDEPSTTGNAQAYATPQSLEPITK
NGVADASEEDVEMQDPESEVEAPAPKKRGRPPGSSAAKPKAKTPAKRVPKPKTPTSKKAS
KSKSRIQDSEQDDDDESTLSDLDSEIEEPPKKTPAKRASGRQARTTVDSLRKTLKRGAAR
KSETALRSHYFEHSDEEMDDE
NT seq 3486 nt   +upstreamnt  +downstreamnt
atgcctccattcctgcctcgaaagcgtctgcgatcgccgacgcctgagccaggaccttcg
cggcctgctccagccaaaagcaagggcaaaggcaaagccgtgacaaccacccccaggaag
cctacgctctttgatgacctggacgccggaacgggcaccaggcgctctgcggaacatggc
aaagctatgctggaaaaactggctgctacgagtgacgacgagagctcgctttcctcactg
tctgacgaggaatttgaagatgtgccgaatgcaaaacgacagaagatctctgcggcagag
gaagacgatgatgaggatgaagacatagaatttgaggatgtggatacgaacgttgcccct
ggagcatctgcgaatatttctacgggtgatctggagttgacgttgacgaaggatacaagg
atttccattacaaatccatttgggacgaagaagggaccaagcaagatcgagaggggcatt
agagttgacacgcataagatgcacgtccagtttttaatgtggcacaatgccgttcggaac
ggatggtgctgtgataaagaagtgcaagagattctagtcaagcagttgcccaaaactcta
ctggaagcagttgagaagtggaaacgagatagcggattggaagtaaaggaggatagagag
gatggaatccctaagggaaaagggaaaggcaagggcaagacgaaggatacgaagactacg
aagggagagcaggcaaattcgagacgtcagagtgattgggctgcatcagcacggcctaca
gctgaggggcaagtcaatatgagtgctggcgatccattattcaatctgctcgagaagctc
aggagatattggaaaagtcagtttcggatcacggctccgggtctgagaaagttgggatac
atgtctctgcaacggttagacaaggcatccaagacttttaaagagaactacgatccggaa
cggcatggcgaacggataagaaatatcaaagagttccgggcatgtgctcagattatggag
ggcagtcgggatgtcggcgcacagctgttcactgctctgctacgagttcttggtctagaa
acgagactggttgcaagtcttcaacctgcaggctttggttggagtgcaagcgaggaagcc
tcaaaaagtaatcctcgaagattaaagaagtcaaatgcagctgatgattcttctgatgaa
gagacgagcgctgaggaggaggaagtacagcctttaccgcagcctatatcgaagccagca
aagaaggccaaagctccaaccaaatccaaagccaagactattcctaagccattagattta
gatgaagaggcgagttttgtcgaggaagaagaagcaccggtccctaagtcagtgagaaag
ggcaaaactgcgggcaaatctgcttcgaaaccttctagacgtacttcgaggggaaatggt
ctcaagaatgccccaatagacttatctgactctgaagccgctgttgatgaggaagatgat
gattctgtgattgacatcacgcctgcgaagcaagtccgtgcaacctcattatcttatgat
aaggatcttccattccctcattactggagcgaggttttatctcctgtgacgaatacatat
acgccagtcgatgcggttgttctacatcttgtgggaactggcagagagaccattgagaaa
tttgagaccagaggagtggcagcggataaagggaaacaggtcacggcatacatcattggt
cactcttctgatggtactgccaaagatgtcacaactcggtacttgaagaaacatgtatgg
ccaggtcgaaccaagggatatagatatcctgccgagaagatagctatacgcaatcgacac
ggcaagatcaagcgatatgaggaatacgactggttcaaaactgttatgagcagctatgtc
cgtggcacaagaaagtgtcctcgtacagatatcgacgattatgaagaagctactgacctc
aagcgtgtaaagccagaaaagaaagaggtcgaagaaggcaaagagactttgcaatactac
aaatcctctcctgaatttgtcctcgaaagacatttcaagagagaagaagctttggtgcct
actgcaaaacacgtcaagatgttcacaatcaagggcaagggtgaagtcacgactgatgag
aaggtttacttgagaaaagatgttgtcaattgcaagagtatcgagacttggcacaaagaa
ggtcgggctcccaaagatggcgaagaaccgctgaagcgtgttccctatcgagctgcaacg
accaaccgcagacgtgagcttgccgaagccgagaatgccagtggtgagaaggtactccag
ggcttgtatagctgggaccaaacggattggatcattcctccaccgattgagaatggtatc
attccaaagaacaactttggcaacatcgatctttacgtcgacagtatgctccccgaagga
gctgtacacttacccatgcgaggtactgtcaaaatctgtaagcgtctaggtatcgattat
gccgaagcagtcactggtttcgagttcggtcacaggatggctgttcctgtcatcacagga
gtcgtagtagctgaagagcactacgagactatgatggacgagtggcacaaagacgaggca
gaacgagtcagaaaagaagacgagaagcgtcgcaaggcagctcttggcctgtggagaaag
atgctgatgggtcttcgtatcattgagaggttcaaagaggagcgtggtgatggcgatgat
gacacagatgtactcaatcccttcgcgaataagaagaagaggacagaagacgccgaggca
gaagctcagaagaagatcatggatcagcgtgatgaggaaatggctggcggcttcctgcca
gaaggattcgagactgaagaacctgaagagcgtcatccgtccttcttcccagttgttcaa
gagcatgatgatgaggaggaggaaggcggagggtttgtggtcgaaggccatgatgaacct
tcgacgacaggcaatgctcaggcatatgctacaccgcagtcactagaacctatcacgaag
aatggcgtagctgatgcttctgaagaagatgttgaaatgcaggatccagaatccgaagtc
gaagctcctgcaccgaagaaacgcggtagacctcctgggtcttcagcagcgaagcctaaa
gctaaaacgcctgccaagcgagtaccgaagccaaagacaccaacatcgaagaaagcctcc
aagagcaaatcgagaatccaggacagcgagcaagatgacgatgacgagtccactctctca
gatttagactcagaaattgaagagcctcccaagaaaacaccggccaaacgagcttcaggt
cgacaagctaggactacagtagacagcttaaggaagactctgaagagaggtgcggcgagg
aagagtgagactgctttgcgaagtcattacttcgagcacagtgacgaggaaatggatgat
gagtag

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