KEGG   Mollisia scopiformis: LY89DRAFT_685889
Entry
LY89DRAFT_685889  CDS       T04865                                 
Name
(RefSeq) uncharacterized protein
  KO
K12855  pre-mRNA-processing factor 6
Organism
psco  Mollisia scopiformis
Pathway
psco03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LY89DRAFT_685889
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:psco03041]
    LY89DRAFT_685889
Spliceosome [BR:psco03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    LY89DRAFT_685889
 Complex C
   U5 SnRNP specific factors
    LY89DRAFT_685889
SSDB
Motif
Pfam: PRP1_N TPR_14 TPR_19 HAT_PRP39_N HAT_Syf1_CNRKL1_N TPR_16 HAT_PRP39_C Suf TPR_2 HAT_Syf1_CNRKL1_C TPR_8 TPR_17 TPR_CcmH_CycH TPR_9 TPR_1 NatA_aux_su ARM_TT21_2nd TPR_15 TPR_21 ARM_TT21 ARM_TT21_C TPR_12
Other DBs
NCBI-GeneID: 28824890
NCBI-ProteinID: XP_018070386
JGI: 685889
UniProt: A0A194X785
LinkDB
Position
Unknown
AA seq 925 aa
MSGRRDFLNQPAPENYVAGLGRGATGFTTRSDLGPAREGPSEDQIKEALAKRAAQLGAAA
PTAYGAPEKKEEDDDDERFQDPENEVGLFAGGAYDKDDDEADRIYQEVDEKMDRRRKARR
EAREKAEREEYERNNPKIQQQFADLKRALSTVSDDDWANLPEVGDLTGKNRRSKQALRQR
FYAVPDSVLAGARDSTELGTTVADDAPAGGDGADGTMTNFADIGAARDKVLKVRLDQAST
GSDSVAGSATNIDPKGYLTSLAKSQINEGEAQVGDINRARVLLESVIKTNPKHAPGWIAA
ARLEELAGKTVAARNVIARGCEHCPKSEDAWLENIRLNEGRNARIIAATAIKANDTSVRL
WTEAMKLESDPRDKKRVIRHALDHIPQSVMLWKEAVNLEEDPDDAKLLLAKATELIPLSV
ELWLALARLETSENAQKVLNKARKAIPTSHEIWIAAARLQEQMGNAAKVNVMKRAVQALA
KESAMLKREEWITEAEKCEEEDAILTCGNIIRETLGWGLDEDDDRKDIWMEDARSSIGRG
KYETARAIYAYALRVFVNSRKLWLAAADLEKNHGTKEALWQLLEKAVEACPQSEVLWMML
AKEKWQAGEIDNARRVLGRAFNQNPNNEDIWLAAVKLEAENQEPDQARELLKTARQEAPT
DRVWMKSVAYERQLGNPDAALDLVNQALQLFPGAAKLWMMKGQIYEGEGKLPQAREAYGT
GTKACPKSVPLWLLYSRLEEKAGNVVKARGILDRARLAVPKSPELWTESVRLERRGNNIS
QAKNLMAQALQQVPSSGLLYTESIWNLEARTQRKPRALEAIKKVDNDPILFVTIARIFWG
ERRLEKAQNWFEKAILLDSDLGDTWAWYYKFLLQHGTEEKRADVVAKCTLSEPRHGEVWQ
SVAKDPKNAGKTLEEILNIVVTRLE
NT seq 2778 nt   +upstreamnt  +downstreamnt
atgtctggtcgaagagacttcttaaaccaacctgcgccagagaactacgtcgcaggtctt
ggtcgtggtgcgactggatttacaacacgttcagatcttggaccagcgcgagaaggtccc
agcgaagaccaaatcaaagaagctctcgcaaagcgtgcagctcaactcggagcggcagca
cctacagcatatggcgccccagaaaagaaagaagaggatgatgacgatgagcgatttcaa
gaccctgagaacgaggttggcttgtttgcaggaggcgcgtacgacaaagatgacgacgag
gcagatcgcatttaccaagaggtagatgagaagatggacaggcggcggaaagctagaagg
gaagcacgagaaaaggccgaacgagaagaatacgaacggaacaatcccaagatccagcag
caatttgcagacttgaaacgagcactgagtaccgttagcgatgacgattgggcaaatctg
ccagaggttggagacttgacgggcaagaatcgaagaagcaagcaagctttgcgacaacgg
ttttatgctgtacctgatagtgttctcgccggcgcccgagattctacagagcttggcaca
acggttgcagatgatgcgccagctggtggagatggagcagatggaacgatgaccaacttt
gcggatataggagctgctcgagacaaggtgctgaaggttaggctggatcaagcgtctaca
ggcagcgactctgttgccggaagtgctacgaacatcgatcccaaaggctacctcacgagc
ttggcaaaatcacagatcaacgaaggcgaagcacaagttggtgacatcaatcgagctcga
gtattgctagagtctgtcatcaagacaaatccaaagcacgctccaggttggattgctgct
gccagacttgaagagcttgctggaaagactgtagctgcccgcaatgttattgcccgaggc
tgtgagcattgtccaaaaagtgaagatgcttggctggaaaacattagactgaacgaaggc
cggaatgccaggatcattgctgccactgccatcaaggccaatgatacctctgtgcgactt
tggaccgaagccatgaagttggaatcggacccaagggacaaaaagcgagttattcgacat
gctttggatcacatcccccaatcagttatgttgtggaaggaagcagtcaacttggaagag
gatcccgatgatgccaaactactacttgcgaaggcaactgaacttatccccctttctgtt
gaactctggctggctttggcccgattagagacttcggagaatgctcagaaggtactaaac
aaggctcgaaaggctattcctacgtcacatgagatttggattgcagctgctcggctacaa
gaacaaatgggcaatgcagccaaggtcaatgttatgaagcgtgcagtacaggctcttgcc
aaagaatcggcgatgttgaagcgagaagaatggatcaccgaagctgagaagtgtgaagag
gaagatgctattctgacctgcggaaacatcattcgcgaaactcttggctggggtctcgac
gaagatgacgaccgcaaggatatctggatggaagacgctcgctcaagtattggtcgtggc
aagtacgaaactgcacgcgccatttatgcttatgcgttgcgagtgtttgtcaacagtagg
aagttgtggcttgccgctgcagatctggagaagaatcacggaacgaaggaagcattatgg
cagcttcttgagaaggctgttgaagcatgtccgcagagcgaagtcttgtggatgatgctg
gctaaagagaagtggcaagctggagagattgacaacgcgagaagagtgttgggccgcgct
ttcaatcaaaatccaaacaacgaagatatctggcttgcggctgtgaagctggaagctgag
aaccaagaaccagatcaggcccgggagctactgaaaacggcaagacaggaagcacccact
gatcgtgtctggatgaagagcgtggcatatgaaagacaacttgggaacccagatgcagct
cttgacttggtcaatcaggctcttcaattgttccctggcgctgctaaattatggatgatg
aaaggccaaatatacgagggcgaaggcaagttaccacaagctcgtgaagcatatggtact
ggtaccaaggcatgcccaaagtctgttccactctggctcctttactcgagacttgaggag
aaagcaggcaatgttgtcaaagctcgcggcattcttgatcgtgctcgactagccgttccg
aagtcaccggagctctggaccgagtctgttagactggaacgacgaggtaacaacattagt
caagcaaagaatcttatggcccaagcattacaacaagttcccagtagcgggctgttatat
accgaatcaatctggaatcttgaagcccgaacacaacgaaagcctcgagcattggaagcc
atcaagaaagtcgacaacgacccgatattgttcgttaccattgcacggattttctggggt
gagcgaagattggagaaggcccaaaattggttcgagaaagcaatcttgttagatagtgac
cttggcgatacgtgggcttggtattacaagttcttgcttcaacatggcactgaagagaag
cgagcagatgtcgttgctaaatgcacgttaagcgagccgagacatggggaggtttggcag
agtgtggcaaaagatcccaagaatgccggcaagactctggaagaaattctcaatattgtt
gtgactagactggagtaa

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