KEGG   Mollisia scopiformis: LY89DRAFT_688416
Entry
LY89DRAFT_688416  CDS       T04865                                 
Name
(RefSeq) replication factor-a protein
  KO
K07466  replication factor A1
Organism
psco  Mollisia scopiformis
Pathway
psco03030  DNA replication
psco03420  Nucleotide excision repair
psco03430  Mismatch repair
psco03440  Homologous recombination
psco03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:psco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LY89DRAFT_688416
   03420 Nucleotide excision repair
    LY89DRAFT_688416
   03430 Mismatch repair
    LY89DRAFT_688416
   03440 Homologous recombination
    LY89DRAFT_688416
   03460 Fanconi anemia pathway
    LY89DRAFT_688416
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:psco03000]
    LY89DRAFT_688416
   03032 DNA replication proteins [BR:psco03032]
    LY89DRAFT_688416
   03400 DNA repair and recombination proteins [BR:psco03400]
    LY89DRAFT_688416
Transcription factors [BR:psco03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    LY89DRAFT_688416
DNA replication proteins [BR:psco03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    LY89DRAFT_688416
DNA repair and recombination proteins [BR:psco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     LY89DRAFT_688416
   MMR (mismatch excision repair)
     LY89DRAFT_688416
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     LY89DRAFT_688416
SSDB
Motif
Pfam: Rep_fac-A_C REPA_OB_2 Rep-A_N tRNA_anti-codon DUF223 CDC24_OB3
Other DBs
NCBI-GeneID: 28825426
NCBI-ProteinID: XP_018066287
JGI: 688416
UniProt: A0A194WWH9
LinkDB
Position
Unknown
AA seq 615 aa
MAEAAARAQITQGALNAIFNDPETLQQNFPVPVCQCVQIKALSSSTEGGAERYRIVLSDI
KNFVQSMLATQANHVIHDGKLKKGSIVRLKNYQANAVKGKRILIILDLEVIESLGELEKI
DNPVGLTVKEESDDSKPVSTTIAGGGFYGSKPQAAEPVKQEQRTLPSRTGPSSSASHSNL
YPIEGLSPYAHKWTIKARVTHKSDIRTWHKQNSEGKLFSVNLLDESSEIKATGFNEQCDQ
LYDVFQEGAVYYISSPCRVQLAKKQFSTLPNDYELTFERDTLVEKAEDVTDVPQVRYNFT
TIGALQDVEKDSTIDVIGVLKEVADVTQITSKTTQKPFDKRELTLVDDSGFSVRLTIWGK
TATAFDAETEAIVAFKGTKVGDFGGRSLSLLSSGSMAVNPDIPEAHKLKGWYDSQGRTEH
FNSHTGMAGAGAAGGRNEQLKTIAQVREENLGMSENNDYFSTKGTIVYIKQENFAYPACA
SPDCNKKVTDMGDGTWHCEKCNVTHQKPEYRYIMSVNVNDHTGQMYLSCFDDVGRLIMGM
SGDSLMELKENDSAAAQKVFEDANCKTYTFKVRAKMDTFQDQQRVRYQVIGAVPIDYKTE
ALKLANLIKQYHMND
NT seq 1848 nt   +upstreamnt  +downstreamnt
atggcagaggcagcagcaagagcgcagatcactcagggcgcgttgaacgcaatcttcaat
gacccagagacgctgcagcaaaacttcccagttccagtatgccagtgtgtgcagatcaaa
gccctcagctccagcactgaaggcggagctgaacgttaccgcattgtattgagcgatatc
aagaacttcgtccagagcatgcttgctacccaagcaaatcacgtcatccatgatggcaaa
ttaaagaagggctctatcgttcgactgaagaattatcaggccaacgccgttaagggaaag
agaatcctgatcattctagatctcgaagtcatcgaaagcctcggagaactcgaaaagatt
gataacccagttgggcttaccgtaaaagaagagtcggacgactcgaagccggtcagtaca
acgattgcaggcggtggattctacggaagtaaaccacaagcagccgagcctgtcaagcaa
gaacaacgcaccctcccctcaagaaccggaccttcgagttctgcttctcactcaaatcta
taccccatcgaaggtctatcgccttacgcccacaaatggaccatcaaagctcgtgtcacc
cataagtcagacatcagaacatggcacaagcagaacagcgagggaaagttgttcagtgtt
aatcttctcgacgagagtagtgagataaaggctactggattcaatgagcagtgtgatcag
ctgtacgatgtcttccaggagggtgctgtctactatatctcaagtccatgtcgagtacaa
ctcgccaagaagcagttctcgactctgccaaatgattacgagcttacatttgagcgagat
acacttgtcgagaaggctgaagatgtgactgatgttcctcaagttcgttacaacttcacc
accattggcgctttacaggatgttgaaaaggattcgactatcgatgtcattggcgtccta
aaagaggttgcagacgttacccaaattacttcgaagactactcagaagccatttgataag
cgagaactcactctagtcgacgacagtggcttttctgtccgactgaccatatggggcaag
acagctacagctttcgatgcagaaactgaagctattgtagcttttaagggtaccaaggtc
ggagactttggcggtagaagtttgagcttgctctcttctggctccatggccgtcaacccc
gatatcccagaagcacacaagctgaagggatggtacgattcgcaaggtagaactgagcac
ttcaactcgcacacgggcatggctggcgcaggagctgctggaggccgcaatgaacagctg
aagactattgctcaagtccgagaagagaatcttggtatgtctgagaataacgattacttc
tccaccaagggtacgatcgtgtacatcaagcaagaaaacttcgcgtatcctgcttgcgcg
agccccgactgcaacaagaaggtcaccgatatgggagacggtacctggcactgtgagaag
tgcaatgtgacccatcagaagccagagtacagatacatcatgtctgtgaatgtcaatgat
cacactggtcaaatgtatctgagctgttttgatgatgttggacgtctcatcatgggtatg
agtggagattcgctcatggaactcaaggaaaatgattctgctgctgctcagaaggttttc
gaagatgccaattgcaagacctataccttcaaggttagagccaagatggatactttccaa
gatcagcagagagttcgttaccaagttatcggtgctgttcctattgattacaagactgaa
gctctcaagcttgcgaacttgatcaagcagtaccacatgaatgactga

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