Mollisia scopiformis: LY89DRAFT_689555
Help
Entry
LY89DRAFT_689555 CDS
T04865
Name
(RefSeq) MIF4G domain-containing protein
KO
K14327
regulator of nonsense transcripts 2
Organism
psco
Mollisia scopiformis
Pathway
psco03013
Nucleocytoplasmic transport
psco03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
LY89DRAFT_689555
03015 mRNA surveillance pathway
LY89DRAFT_689555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psco03019
]
LY89DRAFT_689555
Messenger RNA biogenesis [BR:
psco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
LY89DRAFT_689555
mRNA cycle factors
P-body specific factors
LY89DRAFT_689555
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
28825653
NCBI-ProteinID:
XP_018064619
JGI:
689555
UniProt:
A0A132BEI9
LinkDB
All DBs
Position
Unknown
AA seq
1250 aa
AA seq
DB search
MDRKRKRELRELNNRAWDGEKGVYEVSKSLDSSLKKNTAFIKRLRTAVSAATLSTFLQEI
RTLSLHKYLSEIISACYEGLCKLKSPGEIEAGVEIVSALHQRFGPAEFTEFLGWLVGKGL
ATPEKSILKTLATEAREKEEKERITRQRVLLRVVTELWLVGVLRTLDDVSRPDDASRGKE
SLSTSSGKAPEVKSKPGSSSKGGGAEPFPLEVLKDLLGHDREHANLPLLVIFVKAFGWDI
LGVKEAGSEGRKTVEEDGATKSSNGTTDGEDDSAEESGPNGNGTDDPPLASSELQERFRN
ILKRYFEDLKSHLVRDQKAISKQARKDAEAYVKSGQVFEDRQANYEKAVKAQERLVSNSQ
VLADAIGAEMPELKDSEDSSATGSGGIGLVKTGEYLRGEGDGAGIWEDEDERRFYENLVD
LKGKVPGMLLEDGKKKKADTDDQVGKKVDPADTAAAENALANKEDDQSTAIANKTIGAQV
DALLARLPDLTNKDLIDQAAIDFCFVNSKASRNRLIKAVQEIPKGRSDLLPSYSRLVATL
GKYMPDITKGLVDHLDQEFRSLQRRKEKEFLGQARLGNIRYLAELTKFGVVPEHVIFHCL
KVSLDDFSRMNIEIICNLLENCGRYLLRNPETSPRMASFLETLKRKKSVQHIGQQERMLI
ENAVYYVDPPVRAAIQQKERTPIDLFIRKLVYLDMNNRNYTKILKQIRRLHWEETEVVAI
LEKIFSKPGKVKYGNIHLLAILACALYRYHQDFVTAVIDNVLEYIVVGLEQNDFKFNQRR
LAEVKYLGELYNYRMVDHPVIFETLYRIMTFGHGGPPVPGRLNPFDMPDDFFRIRLVATL
LETCGIFFNRGASGQKLDYFLSFFQYYIYTKDPLPMDIEFIVQDVFALTRPQWKLASNIE
EAGKAFQLAMAKDAKTSGIDRAAEPEEQDSDGSSDDGMGDNEIDAGLQEADEESEEDEEV
DVDLNGDAAVSTPVSDSEEEAIVVTREEEEIDPEDEADFEREYAKMMAESLESRKHERKA
TFDVPLPMLRKNPNTVGESFAEEHASGNATPPGTMAFSLLTKRGNRQQTRTVALPSDSTF
AVAMKTQQAAEREEQQRIKNLVLNYDLRDGEDQDGDSAHDPLFPNPNIHNRNAGLEKAAA
LTYSRPDKSGNNRSGQRARKLQLSDVDWYASKPTFSHVEQSETSLSPLDGQGRLASSAPN
SRSSEENSASQRIIEASNRARGRSRGRLTRKEMLEAHASLGDGSKPPRKK
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcaagaggaagcgcgaattgcgcgaattgaataaccgtgcttgggatggagag
aaaggagtctacgaagtgagcaagtctctcgactcgtctctcaaaaagaatacagcattc
atcaaacgactccgaaccgctgtttctgctgcaaccctcagcaccttcctgcaagagatt
cgaacactcagcctacataaatatctctctgagatcatatcagcatgttacgaagggctg
tgcaaattgaaatcgcccggagaaatcgaggctggagttgagatagtgagcgcattgcat
caacgatttgggcctgcagagttcacagaattcctcggatggcttgtaggcaagggatta
gctacgccggagaagtctatccttaaaactcttgctactgaagccagggaaaaggaggag
aaggaacgcattacacgccaaagagttctgctgcgggttgttacggaactatggctcgtg
ggggtattgaggacactagacgatgtcagccgacctgacgatgcttcccgcggaaaggaa
tctctttcaacaagttctggaaaagcccctgaagttaaatcgaagcctggttcgtcaagc
aagggaggtggagccgaaccctttccactagaagtcctcaaggatctcttaggtcatgat
agggaacatgccaacttgccattacttgtcatattcgtcaaggcttttggatgggatatt
cttggcgtcaaggaagcaggatcggaaggccgaaagacggtagaagaggacggtgcaaca
aagtcctcgaacggtactacagatggtgaagatgactctgctgaggaatctggacctaat
ggaaatggtaccgatgaccctcctcttgcttcatcagaattacaggaaagattccgcaac
attctcaagcgatactttgaggatttgaaaagccatcttgtccgagaccaaaaggctatt
agcaagcaagcacgcaaggatgctgaggcttatgtcaaatccggtcaggtatttgaggac
cgccaggcaaactacgagaaggcggttaaggctcaagaacgtttggtatcaaattctcag
gtccttgcagatgccattggtgcagagatgccggagttgaaagactccgaagatagctca
gctactggcagcggaggcattggccttgtaaagactggtgagtatctacgaggagagggt
gatggagcaggaatctgggaagacgaggatgagaggcgattttacgagaacctggtcgat
ttgaaaggcaaggttccgggaatgctgctcgaagacgggaaaaaaaagaaagcagatact
gatgatcaggttggcaagaaggtcgatcctgctgatactgcggccgcagaaaatgcttta
gccaacaaagaggacgaccagtcaactgctattgcaaataaaaccattggagcacaggtt
gatgcgcttctcgctcgtctaccagatcttaccaacaaggacttgattgatcaggccgcc
attgacttctgcttcgtcaactccaaggcttcccgaaaccggctcattaaagctgtccaa
gagattccaaaaggtcgtagcgacttattgccctcatactctcgtcttgtggctacacta
gggaaatacatgccagatatcacgaaaggtttggttgatcacctcgatcaagagtttcgc
agtcttcagcgaagaaaggagaaggaattcctgggtcaagctcgtcttggcaatatccgc
taccttgccgaattaacaaaatttggagtcgtccctgagcatgtaatcttccattgcttg
aaggtcagtttggatgatttttcaaggatgaatattgagatcatctgcaatttgcttgag
aattgcggtcgatacttgctacgtaacccagaaacgtcgcctcgtatggcttcattctta
gagactttgaaacgcaagaagtccgtccagcatattggtcaacaagaacgcatgcttatt
gagaacgccgtctactacgtggaccctcctgtcagagctgctatccagcagaaggagcga
actcccattgacttgttcattcgcaagctcgtctacctagatatgaataaccgcaactac
accaagatcctgaagcaaatccgaagacttcattgggaagagaccgaggttgtcgccata
cttgaaaagatcttctcaaaacctggaaaagtcaagtatggtaacatccaccttcttgct
attctggcttgcgctctgtaccgttaccaccaggacttcgttacagcagtcatcgataat
gtcttggaatacattgtggtcggactggaacaaaatgacttcaaattcaaccagcgacga
cttgcagaggtcaagtatctcggcgagctttacaactaccgcatggttgatcacccagtt
atttttgagactttgtatcgtatcatgacgtttggtcacggtggcccacctgttccaggt
cgcctaaatcctttcgatatgcctgatgatttcttccgcattcgcctagtagcaactctt
ctcgaaacttgtggcattttcttcaacagaggagcatcgggccaaaagttagactacttt
ctatccttctttcagtactacatctacacgaaagatccacttcctatggatattgaattc
atcgtgcaggatgtttttgctttgactcgaccccaatggaagctagcgtctaacatcgaa
gaagccgggaaagctttccaacttgccatggctaaagatgcgaagacgtctggtatcgat
agagctgccgaacctgaggagcaagacagtgatggatcttcagatgatggcatgggtgat
aacgagattgatgcaggtcttcaagaagctgacgaagagtctgaggaagacgaagaagta
gatgtcgacctcaatggggatgctgctgtttccacaccggtttctgactccgaagaggag
gctatcgttgtcactcgtgaagaagaagaaattgatcccgaagacgaagcagacttcgag
cgtgagtatgcaaagatgatggctgaatctctagaatctcgcaagcacgaacgaaaagct
acattcgatgtgcctctgcccatgttgcgtaaaaacccaaacacagtcggcgagtctttt
gccgaagaacatgccagcggaaatgcgacccctccagggacaatggcattttcgctactt
acaaagcgtggcaatcgtcaacagactcgaaccgtcgcactcccctctgattcaacattc
gcggtcgccatgaaaactcaacaagccgctgaacgagaggagcaacaacgaatcaaaaac
ctggttctgaattacgatcttcgtgacggcgaagatcaagatggtgattcagcacatgac
cccttattcccaaaccccaatattcacaatcgcaatgcaggactagaaaaggccgccgct
ttgacgtattccagacctgataagtctggcaataatcgcagtggtcagcgggctaggaag
ttgcaactcagtgatgtcgattggtatgcttctaaaccaactttctcccatgttgagcaa
tccgaaacttcattatctcctttggatgggcaaggccgtcttgcttcttctgctccgaac
tctaggtcttctgaggagaactctgcttctcagcgcattatcgaggcctctaatagagcc
aggggtcgtagtcgcggcagactcacaaggaaggaaatgcttgaggctcacgcttctctg
ggtgatggctcgaagcctcctcggaagaagtag
DBGET
integrated database retrieval system