Mollisia scopiformis: LY89DRAFT_694310
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Entry
LY89DRAFT_694310 CDS
T04865
Name
(RefSeq) splicing factor, CC1-like protein
KO
K13091
RNA-binding protein 23/39
Organism
psco
Mollisia scopiformis
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psco03041
]
LY89DRAFT_694310
Spliceosome [BR:
psco03041
]
Common components
Common spliceosomal components
General mRNP proteins
LY89DRAFT_694310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
RRM_3
Motif
Other DBs
NCBI-GeneID:
28826422
NCBI-ProteinID:
XP_018076188
JGI:
694310
UniProt:
A0A194XNT2
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
MSALDVEALLDSTANGTPVENGSSKPKDLDDRHRNERNDRRDRDRNRDSSRDRDRDRKRR
GDRSRDRNRREVNGDKELIGTPTSDHGSAHGSTKSRRRSRSREDRHSRRHRDSPDETGRR
DGDFYRGSGRTRSRSRSPNRYYRPRGDRRDREEIDAGKPREDRRNRNDRRASRSPKREST
PPLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFK
NEESVPAAIQLTGQKLLGIPIIAQLTEAEKNRQVRNTETAGSNPNQIPFHRLYVGNIHFS
ITESDLQNVFEPFGELEFVQLQKEEQGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRPI
RVGLGNDKFTPESTASLLQRFQGQSHQQQFQGSAFSGAGGRGPQAVGGSNFDRAGGRDND
KGAGGASALDDTDVGGVNFNNYSRDALMRKLARTDEPAPATKGRDERREILKPKTETKPL
PVNVNMASRCVVLKNMFDPAEEEGENWEKELEDDVRAEAEEKYGHVVHIALDPNSQGDIY
LKFDRVQGGENAIKGLNGRYFGGRMISATPVVDAVYSSLFSRTKAI
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcccttgacgttgaggcgcttttggactcaactgcaaatggtactccagtcgaa
aatggatcctcgaaacccaaagacctagatgaccgccataggaatgaacgaaatgatcgt
cgcgatcgagaccgaaaccgagattccagtagagaccgtgatagggatcgcaagcgtcgg
ggcgaccgaagcagagacaggaatcgcagagaagtcaacggtgataaagagttgattggg
acacctacaagcgatcatggtagcgctcatggcagtaccaagagtaggcgcagaagtaga
agccgagaagaccgacactcacgtcgccacagagatagccctgacgagaccggccgcaga
gatggagacttctacagaggaagtgggcgcactcgctcacgttctaggagcccgaataga
tactatcgtcctcgaggtgaccgccgagatcgggaggagatagatgccggcaaaccaaga
gaagaccgtcggaacagaaatgatcgacgagcaagtaggagcccaaagagagagtctaca
cctcctttgactgaggacgagcgtgatcgtcgcacagtcttcgtccaacaacttgcagct
cgtctcaggactaaagaactgatagcctttttcgagaaagttggtcctgttaaagaggct
cagattgtgaaggacagagttagtggtagatccaaaggtgttggctacgttgagttcaag
aatgaagaatcggtccctgctgctattcaactcactggtcagaaactcctaggaatcccc
atcatcgcccagctcacggaagccgaaaagaatcgtcaagtacgcaacaccgaaaccgcc
ggcagtaaccccaaccagatccctttccatcgactctatgtgggtaatatccatttcagt
atcactgaaagcgatttacagaatgtttttgaaccttttggagaacttgagtttgtgcag
cttcagaaggaggaacagggccgcagccgaggctatggctttgtccaatttcgtgatcct
aatcaagctcgtgaagctttagaaaagatgaatgggtttgaccttgctggtcgaccaatt
cgtgttggtcttggcaacgataagttcactcctgagtctaccgccagtcttctgcaaaga
ttccaaggccagagccaccaacaacaattccagggttctgctttctccggtgctggtggg
cgtggtccccaagcagtcggcggtagtaattttgaccgcgcaggtggccgcgacaacgac
aaaggtgccggtggtgccagtgctctagatgacaccgatgttggtggggtaaacttcaac
aattatagtcgagatgcattgatgaggaagcttgccagaacagacgaacctgcccccgcc
actaaaggccgcgacgagaggcgcgagatcttgaagcccaagactgagaccaagccgttg
ccagtcaatgtcaatatggccagcagatgcgtcgtcctcaagaatatgttcgatcctgcc
gaagaagaaggtgaaaactgggaaaaggaattggaagatgacgttcgagcggaggccgaa
gagaaatatggccatgttgttcacattgctctagatcccaactcccaaggcgacatctac
cttaaattcgaccgagtgcaaggaggcgaaaatgccatcaagggcctcaacggcagatat
tttggaggacgtatgattagcgctacgcctgttgtggatgcagtctacagcagtttgttc
tcacgcacaaaggctatctaa
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