Mollisia scopiformis: LY89DRAFT_700622
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Entry
LY89DRAFT_700622 CDS
T04865
Name
(RefSeq) DEAD-domain-containing protein
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
psco
Mollisia scopiformis
Pathway
psco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LY89DRAFT_700622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psco03019
]
LY89DRAFT_700622
03036 Chromosome and associated proteins [BR:
psco03036
]
LY89DRAFT_700622
Enzymes [BR:
psco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LY89DRAFT_700622
Messenger RNA biogenesis [BR:
psco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
LY89DRAFT_700622
mRNA degradation factors
5'-3' decay
Decapping complex
LY89DRAFT_700622
Chromosome and associated proteins [BR:
psco03036
]
Eukaryotic type
Gene silencing
piRNA pathway
LY89DRAFT_700622
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
28826863
NCBI-ProteinID:
XP_018065037
JGI:
700622
UniProt:
A0A194WST4
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MADDLAQQLNATKLSDGASPSTEAWKKDLKIPAKDRRVQTEDVTATKGLEFEDFKLKRDL
LMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFIIPALQQINPKNNKIQA
LILVPTRELAMQTSQVCKTLGKNLGVNVMVTTGGTLLRDDIVRLQDPVHIIVGTPGRILD
LAGKGVADLSECPTFIMDEADKLLSPEFTPVIEQLLSHHPKDRQVMLFSATFPITVKAFS
DKNMHDPYEINLMDELTLRGITQYYAFVEESQKVHCLNTLFSKLQINQSIIFCNSTNRVE
LLAKKITELGYSCFYSHARMIQNNRNRVFHDFRNGACRNLVCSDLLTRGIDIQAVNVVIN
FDFPKNAETYLHRIGRSGRFGHLGLAINLINWDDRFNLYNIERDLGTEIQPIPATIDKNL
YVYDTPENIPRPVTNFQTNRQTSARESPAREQGQQAGNSRGGGSGNYDNRRQNGTNPNQN
QRQPQSQRQGQGFSRGGRYEQGGNRRGGGNQGQRQNGYEGQRGGRGQPTPAQ
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgatttagctcaacaattaaatgctacgaagctgagcgatggagcttcacca
tcaacggaggcatggaagaaagacctgaagattccagccaaggatagaagagtacagact
gaggatgttactgccacgaaaggactcgagttcgaggacttcaaattaaagcgagacctg
ttgatgggtatcttcgaagctggtttcgagaagccttcgcccattcaagaggaggcaata
ccagtggctctcactggcagagatatcctagcccgagcaaagaacggaactggcaagacc
gccgccttcatcatacctgcccttcaacaaatcaacccgaaaaacaacaagatccaagcc
ctcatccttgttccaactcgagaattagccatgcagacatctcaagtttgcaagacactt
gggaagaaccttggtgtcaatgtcatggtcactactggaggtactcttctacgagacgat
atcgtgcgtttacaagaccctgtccacatcattgtcggcacacctggcagaatcctcgat
ctggctggcaaaggtgtcgccgatctcagcgaatgtcccactttcatcatggacgaagct
gacaaacttctctcccctgaattcactcctgttattgaacaactactttctcaccatcca
aaggaccgtcaggttatgctcttcagtgcaactttccccatcactgtcaaggctttctcg
gacaagaacatgcacgacccttacgaaattaacttgatggatgaacttactctccgtggt
atcactcaatattacgcattcgttgaagagagtcaaaaggtgcattgtctcaacaccctc
ttctcgaagctgcagatcaaccaatcgatcatcttctgcaactctaccaaccgtgtcgaa
cttctcgctaaaaagatcactgagcttggatactcctgcttctatagtcacgcccgtatg
attcagaacaaccgcaatcgtgtctttcatgacttccgcaatggggcttgtcgtaacctc
gtctgcagcgatttgttgacccgtggcatcgacattcaagctgtcaatgttgtcatcaac
ttcgacttccctaagaatgccgagacatatctccatcgtatcggtcgttcagggcgtttt
ggacatttgggcttggccatcaacctgatcaactgggatgatagattcaacctttacaat
atcgagcgcgatttgggcactgaaatccagccaattcctgcgactattgacaagaacctc
tacgtttacgataccccggaaaatattcccaggcctgttactaatttccaaactaatcgc
cagacctcagctcgcgagtctcctgctcgcgaacaaggacaacaagctggtaattcacga
ggtggcggttccggcaactacgacaacagacgccaaaatggcaccaacccaaatcagaac
cagagacaacctcaaagccagcgtcaaggccaaggtttctcacgaggaggcagatatgaa
caaggcggtaatcgacgaggcggcggcaaccaaggccaacgtcaaaacggctatgagggg
cagagaggcggtcgtgggcaacccacaccggctcaatag
DBGET
integrated database retrieval system