Mollisia scopiformis: LY89DRAFT_708206
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Entry
LY89DRAFT_708206 CDS
T04865
Name
(RefSeq) U3 small nucleolar RNA associated protein
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
psco
Mollisia scopiformis
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psco03009
]
LY89DRAFT_708206
04121 Ubiquitin system [BR:
psco04121
]
LY89DRAFT_708206
Ribosome biogenesis [BR:
psco03009
]
Eukaryotic type
90S particles
Other 90S particles
LY89DRAFT_708206
Ubiquitin system [BR:
psco04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
LY89DRAFT_708206
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Sof1
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WD40_RFWD3
EIF3I
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
eIF2A
Beta-prop_ELP1_1st
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
28827397
NCBI-ProteinID:
XP_018069682
JGI:
708206
UniProt:
A0A194X691
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MKIKALSRPSSLAQAPGSDVQRTPRNLDPALHPFERAREYTRALNATKMERMFAAPFIGD
LGKGHVDGVYTMAKDPTNLQRFASGSGDGVVKVWDLTSRDETWNTSAHENIVKGMCWTQD
SKVLTCASDRSIKLWFPYDTPSGSAPTATWLGSNAFTSLSSHRSKASFAASSGVISIYDL
SRHTAPPEVLHWPTSTDTITTVSFNQIETSILASCATDRSIVLYDLRTSMPLAKTILNFT
SNAISWNPQEAFNFAVANEDHNIYVFDMRKMDRAQNVLKDHVAAVMDVEFSPTGEELVSA
SYDRTIRLFSKMKGHSRDVYHTKRMQRVFSTKWSPDSKYILSGSDDGNIRLWRANASKRE
GVKSARQRQALEYNEALTERYAHMPEIRRIQRHRHIPKVIKKAGEIKSEELKAIKRRQEN
ERKHSKKQFQKRRPEREKMVLASEK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaaagccctttctcgcccttcgtccttggcgcaggcccctgggtctgatgtg
caacggacgccacgaaacctggatccggcgttacatccatttgaacgtgctcgcgaatac
accagggctctgaatgcgaccaagatggagcgaatgtttgctgcgcccttcattggtgac
ttgggaaaaggccatgtcgatggggtatatacaatggcaaaggatccgaccaatcttcag
agatttgcgagtggtagcggtgacggagtagtcaaagtctgggatttgacaagccgagac
gagacctggaatacaagtgcgcacgagaatatcgtcaagggaatgtgctggactcaagat
tcgaaggttctcacatgcgcttcagaccgatcaatcaaactctggttcccctacgacaca
ccttctggatctgcaccgaccgccacctggcttggaagcaatgccttcacgagtttatca
tctcacagatcgaaggcgtcctttgctgcttcatcgggagtcatctcaatatatgatctc
tcgagacatactgctccgccggaagttctgcattggccgacttcaacagataccatcaca
acagtatcattcaatcaaatagagacttcaatcttggcatcatgtgcaacagatcgatcc
atagttctctatgacctccgaacatctatgccccttgcaaaaaccatccttaactttacg
tcaaatgcgatttcttggaatccccaggaagcttttaactttgctgttgcaaatgaagat
cacaacatctacgtatttgatatgagaaagatggacagagcacagaatgttctcaaagat
catgtggcagctgtaatggatgtggaatttagcccaactggagaagagttggtgtcagca
tcttacgacaggactatccggttattttccaagatgaaaggtcattcccgagatgtctat
cacacaaagcggatgcaaagagtcttcagcacgaaatggtctcctgactccaagtacatt
ttgtcaggatctgacgatggcaacattcgcttatggcgagcaaatgcttccaagcgagaa
ggtgttaagtcggcaagacaacgccaggctttggagtacaatgaagctttgacggagaga
tatgcacatatgcctgagatcagacgcattcaacggcacagacatatacccaaggttatt
aagaaggctggcgagatcaagagtgaggagctcaaagctatcaagcgcagacaagagaat
gagcgaaagcatagtaagaagcaattccaaaagaggcggccggagagagagaagatggtc
ctggcatcagaaaagtga
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