Mollisia scopiformis: LY89DRAFT_715267
Help
Entry
LY89DRAFT_715267 CDS
T04865
Name
(RefSeq) SPOC domain-like protein
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
psco
Mollisia scopiformis
Pathway
psco03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LY89DRAFT_715267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psco03400
]
LY89DRAFT_715267
DNA repair and recombination proteins [BR:
psco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
LY89DRAFT_715267
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_PK_bind
Ku
Ku_N
Daxx
VWA
MVP_shoulder
Motif
Other DBs
NCBI-GeneID:
28827918
NCBI-ProteinID:
XP_018075322
JGI:
715267
UniProt:
A0A194XMH0
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MSKEATVFVLDLGSTMGDCHNGRVESDLDYAMRYVYDKMADTMSSTRTTLNTGVIGFRTN
VTNNPLDDGDEGYNNISVLQPLGTLTMPLFNDLKAKITPSQTEAGDAISAIVVAVHMIEK
YTMLKSGKPGSYVRKIILVTDGQGRMDDELLDDIATKINQMGIHLTVMGVDFDDADFGFK
EEDKSIIKQENEKLTRGFVEKCNNDSIVATAAEVIESLSTPKVKEVKSIPVYQGRLCLGD
PEKYPETAMYIDVKRSFFTKAARPVSAKSVVIPLGAASTQSSHTLPGDVEMTDAPPTGDA
SDVRTGRSYKVKDPTSDLGEKFVDYEDLQKGYGYGRTAVPISASDENVTKLETFQSFSII
GFIPTDKYEQYFTMGESGITIAQQVNDKARVALSSLVHALFELESYAVARLVSKDGKDPQ
ILLLAPYIENHLEALIDVPLPFAEDIRMYRFPPLDRVITASGATLETHRYLPSSDLDDAM
SEYVDSMDLSTFDKDDEGNPTEYMKIEDTYSPIVHRILQAIRQRAIYGGPVEPPAEILTK
WSEPPAELAMKSTGRLEKLISVADVRKVPPKVKGTRGRREVIAPLSGLDIESLLVKNKPN
KISKENAIPDFRQMLAAADKDETISDAVKGMSEVIKDLLQVTGDANDQRCQENIKVVREE
MIDYEFPEFYNNFIRDLKKRVFKKEFGNKREFWQTIRLAKLGLIDSTIISTSDVSPEEAT
EFLSIPTELPTRRRES
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaggcgaccgtttttgtcctcgatcttggatcgacaatgggtgattgtcat
aatggtcgggttgagagcgaccttgactacgccatgagatatgtctacgacaagatggca
gacactatgtcctcaacaagaactacattgaatacaggtgtgattggcttccgaactaac
gtgacaaacaaccctctcgatgatggagacgaaggatataacaatatatccgtgcttcaa
ccacttggaactctcaccatgccactattcaacgacttgaaagctaagataactccaagt
caaacagaagccggtgatgctatatcggcaatcgttgttgctgtgcacatgattgagaag
tatactatgctcaagagtggcaagccaggaagttatgttcgaaaaatcattcttgtgaca
gatggccagggaaggatggatgatgaactcctcgatgacatagctaccaagatcaatcag
atgggtatccatttgaccgttatgggcgttgattttgacgacgcagattttggcttcaaa
gaggaagacaaatctattatcaagcaagagaatgaaaagctcacaagggggttcgtagaa
aagtgcaacaacgattctatcgtcgcgactgctgcagaagtcatcgagtctctttccaca
ccaaaagtcaaggaggtcaagtcaattcctgtatatcagggtcgcctctgtcttggagat
cccgagaagtatcccgaaacagccatgtacatcgacgtcaaaaggagttttttcacgaag
gctgcaagaccggtctctgccaaaagtgttgttatcccgcttggtgctgcaagtacccaa
tcatcccatacccttccgggcgatgtggaaatgacggatgccccaccaactggcgatgct
tctgatgtcaggaccggaagatcgtataaagtcaaagaccccacgtctgacctgggcgag
aaattcgttgactatgaggatcttcagaaggggtatggatatggccggacggcagtccct
atcagcgcatccgacgaaaatgtcacgaagctggagacgttccaaagcttctcgatcatc
gggttcattcccacagacaaatacgagcaatattttacaatgggcgagagtggcataaca
atcgcccaacaggtcaatgacaaagctcgcgtggctctctcttctctcgttcacgctctg
ttcgaattggagtcttatgctgtggcgaggcttgtaagcaaagacggaaaagaccctcaa
atcctacttctagcaccttacatcgagaaccatttagaggcattgattgatgtgccattg
ccttttgccgaggacattcgcatgtataggtttccaccattagacagagtcatcaccgca
tctggtgctactcttgagacacataggtatctgccttcgagtgatcttgatgacgctatg
agtgaatacgttgacagcatggatctgtctacctttgacaaggatgatgaaggcaacccc
accgaatacatgaagatcgaagacacatactcacccatagttcatcgcattcttcaagca
atccggcagagagctatttatggtgggcctgtcgaacctcctgccgagattcttacgaag
tggtctgaacctcctgcagagcttgcaatgaagagcactggcagactcgagaagcttatt
tccgttgccgacgtcaggaaagtgccacccaaggtcaaggggacgagaggtcgacgagag
gtcatcgcgccactatctggccttgatatcgaatcgttgctagtcaagaataagccaaat
aagatctctaaggagaatgctattcccgacttccggcaaatgcttgcggcagccgacaag
gatgaaacgatatccgacgctgttaagggcatgtctgaggtaattaaagatcttcttcaa
gtcactggagacgccaatgatcagcgatgtcaagaaaacatcaaggtcgtgcgtgaagaa
atgatcgattacgagtttccggagttctacaacaatttcattagagacttgaagaagcga
gttttcaagaaggaatttggcaacaagagagagttctggcaaacaatcagacttgctaag
ctcggcctgattgatagcactatcatttcaacgtcagatgtatcgccagaggaagctaca
gagtttctttctatacccaccgaattgcccactaggaggcgggagagttga
DBGET
integrated database retrieval system
