Mollisia scopiformis: LY89DRAFT_729996
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Entry
LY89DRAFT_729996 CDS
T04865
Name
(RefSeq) uncharacterized protein
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
psco
Mollisia scopiformis
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psco03021
]
LY89DRAFT_729996
Transcription machinery [BR:
psco03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
LY89DRAFT_729996
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
TPR_Trm732_C
Vac14_Fab1_bd
TOR1L1_N
HEAT_GCN1
HEAT_2
TPR_CAND1
Motif
Other DBs
NCBI-GeneID:
28829153
NCBI-ProteinID:
XP_018075559
JGI:
729996
UniProt:
A0A194XM89
LinkDB
All DBs
Position
Unknown
AA seq
1887 aa
AA seq
DB search
MASRLLETGSTQLIRNTAAQQLADVQKAHPEELFNLLTRVVPYLRHKTWDTRIAAAKALG
GIVDNAERYDPNGEDGSTKNKPKKEENGFHIKKEEPADETPLAEGQLSLDSLDVVSILRY
GKELLRGGGKDIDYALATMNPAQRLAHQKKTLSGRLGLLGEYFEEDIDIDYPPPKHNGAP
TPQIPTSNGHNGNGTKTPSTPADELGLSARQLNQLKRKRKREAQHAGSKNKLIDLSIRRS
STMESIGGDTTMSDIVDDNPNGVSDLLSVGRAEDVDEDAKVVSEFKGPILPIKSELETEE
EAEGGEWPYERLCEFLMVDLFDPQWETRHGAAMGLREIIRVHGAGAGRARDKTRTENDLL
NRRWLDDLACRLCCVFMLDRFGDYVSDTVVAPIRETVGQTLGALLIHLPATTVYAVHRIL
YRMVMQNDLKLEKPGWAICHGGMIGLRYLVAVRNDLLLKDSDLIDGVIRAVMKGLGDWDD
DVRSVSAATLIPIAKEFVNLRPEALDGLINIVWECLSNLGDDLSASTGQIMDLLAKLCSF
PEVLEAMKKNAARDSEQSFALLVPRLYPFLRHTITSVRSAVLRALLTFVNIEGDGTRDWL
NGKILRLIYQNILVERNQDTLNLSLQVWASLVKYLAKDPADLAEQFSMHIEPLMQLTLHP
IGVSRHPLPMNATLFQKPSGSTYSMPAGFVPITTIRQITPPQPSEPPAKKQRRKSTKNIE
PVPTTSSHDVDGHMMQGDVDLVGIDILIRSRIYAAKAMGLIMSLVPFNTLEPYDANIIPG
LTSAFSSTQLTASLIIDEYAKNCTSKDQPARFVDHLIKIIESDRPVHYRDLVSFTQLVRA
QCSQLLNTFRDVGKVSQGRLPVLAVVVQGEPEAGPDAFSIFTADKVVNDDFERLKKAMPA
AQRLIATQALTEAREQTVETITTAKSIKETRDIRIKAAAASALVAMKVSPKKPTHIIKGM
MDSVKKEENVELQQRSASSIARLVELFAEGGRAGPAQKVVSNLAKFSCIDTSETPEFGPN
AVFTANILSLRKEEDRRDHPDAAKFAKEAKEARIVRRGAKEALEQLSAIFGPQLLDKVPT
LKTIMEDALTYAFSGPLPADTKDPEQEAGQSAIDAMSVLRALTPTLSKELHPFVIHLLPL
VIKALHSELSVFRYMAAKCLATVCSVITIEGMTMLVENVLPSISNPIDLNFRQGAIESVY
HLIHVMGDSILPYVIFLIVPVLGRMSDSDNDVRLIATTTFATLVKLVPLEAGIPDPPGLS
EELLKGRDRERQFIGQLLDPHKIEPFHIPVAIKAELRSYQQEGVNWLNFLNKYHLHGILC
DDMGLGKTLQTLCIVASDHHNRAEDYAKTKNPDARRLPSLIVCPPTLSGHWQQEINTYAP
FLTCTAYVGPPADRARLQDQLTKTDIVITSYDICRNDADVLTTLNWNYLVLDEGHLIKNP
RAKVTMAVKRLLSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAAS
RFSKSSSKEQEAGALAIEALHKQVLPFLLRRLKEEVLDDLPPKILQNYYCDLSDLQKKLF
EDFTKKEGKTIAEKASLGDKEAKQHIFQALQYMRKLCNSPALVMKEGHKQYEETQRLLAK
QGTSLRDPIHAPKLTALRDLLVDCGIGTEPSAENELTTETSYVSPHRALIFCQMKEMLDM
VQNDVLKKMLPSVQYLRMDGSVDASKRQDIVNKFNSDPSYDVLLLTTSVGGLGLNLTGAD
TVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKIMSLQRFKIDVASTVV
NQQNAGLGTMETDQILDLFNLGETAEGIDKPTLNGGNGEEREEDMVDATGEVREKGKKGW
LDDLGELWDDKQYEEEFDLDGFLKTMK
NT seq
5664 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaggctcctcgagacaggtagcacacaattgatccgaaatacagctgcacaa
caacttgcggatgttcagaaggcacaccccgaagagcttttcaatcttctgactcgagtc
gttccctacctaagacacaagacatgggacactcggattgctgcagcgaaggcattagga
ggaattgtagataatgcagaaagatatgatccaaatggcgaagacggatcaacaaagaac
aagcccaaaaaagaggaaaatggctttcacatcaagaaggaagaaccagctgatgagaca
cctctcgctgaaggtcaactgagtttggattccctcgacgttgtctctattcttagatat
ggaaaagagctattaaggggtggtggcaaagacattgattatgctcttgccacaatgaat
ccagcacaacgccttgcacatcaaaagaagaccctttctggtcgacttggtctcttaggc
gaatacttcgaggaagatattgacatcgactatcctccaccgaaacataatggagcacca
acacctcaaatcccaacatcgaacggtcacaatggtaatggcaccaagacaccgagcact
cctgccgacgaacttggtctgagtgcaagacaactaaaccagttgaagcggaaacgaaaa
cgagaagcccaacacgcaggaagcaagaataagttgattgatttgtccattcgacgatca
agtacgatggagtcgattggcggtgacactaccatgtcagacatcgttgatgataatccg
aatggggtgtctgacttactatcagtggggcgagccgaagacgttgacgaggatgcgaag
gtggtctccgaattcaaaggtccgatcttgcccatcaaatctgaattagagacagaagaa
gaagctgaaggaggcgaatggccctacgagcgtctctgcgagtttctcatggttgacctc
ttcgaccctcagtgggaaaccagacacggtgctgcgatgggattgagagaaattattcga
gtacatggtgctggagcaggtcgagcacgagataaaactcggactgagaacgacttactc
aacagacgatggcttgacgacctcgcttgccgactttgttgtgtatttatgctggacaga
tttggcgactacgtttctgatactgtcgttgctccaattcgagagacagtaggacagact
ttgggagctttactcatccaccttcctgccacaaccgtttatgctgtacatcgaatcctt
tatcgaatggtcatgcaaaatgatctcaagctcgagaagcctggatgggcgatctgccat
ggaggcatgatcggcttgcgatatctcgtcgccgtccgcaacgatcttctgctcaaagac
agcgacctgattgatggtgtcattcgcgctgttatgaaaggtcttggagattgggacgac
gatgttcgctcggtcagtgctgcaacacttattccaatcgcaaaggagtttgtcaacttg
cgcccagaagcgttggacggtctcatcaatatcgtatgggagtgcttgtccaatctggga
gatgatctcagcgcgagtactggtcaaatcatggatctccttgccaagctttgtagtttc
ccggaggttctggaggctatgaagaagaatgcagccagagattccgaacaatccttcgca
cttcttgtgccacggctataccccttcttgagacataccatcacatcagtacgatctgct
gttctccgtgctctattgacgttcgtcaacattgagggcgatggcactcgagactggctt
aatggcaaaatcctgcggctcatctaccaaaatattctcgtcgagcgtaatcaagataca
ctcaacctctccttacaagtgtgggcttctttggtgaagtatctagccaaggatcctgca
gacctcgctgagcaattttctatgcacatcgagcctctaatgcagctcacactccatcca
attggtgtgtcacgccatcccttaccaatgaacgctacactcttccagaagccctccggt
agcacatactctatgcctgcaggattcgtacctatcacgaccatccgacaaatcactcca
cctcaaccatcagaacctccagccaagaagcaacgacgaaaatctacaaagaatattgaa
cctgttcctacgacatcttctcacgatgtggatggccacatgatgcaaggagatgttgat
ttggtgggtatagatatcctcatcagatcgagaatttatgctgcaaaagccatgggtctc
attatgtcacttgttccctttaatacattggaaccatatgatgcgaacataatcccgggc
ttgacatctgctttctcatctacccagcttacagcctcgttgatcatcgatgagtatgct
aagaactgcacctcaaaggaccaaccagcacgatttgttgatcatctaattaagatcatt
gagtcagatcgtccagtgcattaccgggaccttgttagctttacgcaattggttcgcgct
cagtgttctcagctactcaacaccttccgagacgttggtaaagtgtctcaaggtcggcta
cctgttcttgcagtcgtggtccaaggagagcctgaagctggacctgatgccttctcaatc
tttactgcagataaggttgtcaatgatgactttgagagactcaagaaggcaatgccagct
gctcagagattgatcgccacacaggctttgacagaagctcgtgaacaaactgtcgagacc
atcaccacggccaagtcgatcaaggaaacacgtgatattcggatcaaggctgccgcagca
agcgccttagttgccatgaaggtatcaccgaagaaacccactcatatcatcaagggtatg
atggacagcgtgaagaaagaggagaacgtcgaacttcagcaaagatctgcttcttccatt
gccagacttgttgagctctttgctgagggagggcgcgctggaccagctcagaaggttgtc
tccaacttggctaagttcagttgcattgatacatctgagacacccgagtttggaccaaac
gcagtcttcacggccaacattctgtcgcttcggaaggaagaggaccgaagagatcatcct
gatgctgcgaagtttgccaaggaagctaaagaggccagaatcgtccgacgtggtgctaag
gaggctttggagcagttatcagccatatttggtccccagctgttggacaaagtacccaca
ctcaaaactatcatggaagatgctctgacctacgcattctctgggcctctgccagcagat
accaaggatccagaacaagaagctggacaatctgccattgatgccatgtcagtgcttcgt
gccttgacgccaacattgagcaaggagttgcatccttttgtcattcacctgctgcctttg
gtcatcaaagccttgcattcagaactgtctgtcttcagatacatggctgcaaaatgtctt
gctactgtatgcagtgtgattaccattgaaggtatgaccatgctcgttgagaatgtactt
ccatcgatcagcaatcctatcgacctcaacttccgccaaggagcgatcgagtctgtctat
catctcattcatgtcatgggtgacagcatcttaccatatgttattttcctcatcgtacct
gtacttggtaggatgagcgattctgacaacgatgtgcgactgattgccaccacgaccttc
gcgacactggtcaagcttgtgccattagaagcaggtattccagatcccccaggattgtca
gaagaattgttgaagggacgtgatcgtgaacgacaattcatcggtcagctgcttgatccc
cacaagatcgagccattccatattcctgtcgctatcaaagcagaactccgatcgtaccaa
caggaaggtgtcaactggctcaacttcctcaacaagtaccatcttcatggtattctttgc
gacgatatgggtctcggcaagactttgcagacactctgcatcgttgctagtgatcaccat
aatcgagcagaagactatgcaaagacgaagaatccagatgctcgcagattgccatcgctc
attgtctgccctccaacgctctctggtcattggcaacaagagatcaacacttatgcacca
ttcctcacttgtacagcctatgttggccctccggctgatcgtgctcgactgcaagatcag
ttgaccaagacggacatcgtcatcacgtcctatgatatctgccgaaatgatgctgatgtt
ctcaccacattgaattggaactatcttgttcttgatgagggacatctgatcaagaatcct
agagccaaggtcactatggcagtaaagcgtctgctcagtaatcatcgtctcatcctgtct
ggtactccgattcagaacaacgtcttggaactctggtccctgttcgatttcctcatgcct
ggtttccttggtaccgagaaggtcttcctcgatcgctttgccaagcctatcgctgccagt
cgattcagcaagtcatcctccaaagaacaagaagctggtgcattggccatcgaggccctt
cacaagcaggtccttcccttccttctccgacgtctcaaggaagaagtccttgatgatcta
cctccaaagatcctacagaattactactgtgatcttagcgatcttcaaaagaagctattc
gaggacttcactaagaaagaaggcaagacgattgctgagaaagcttcacttggagacaag
gaagccaaacagcatatcttccaggccttgcaatatatgcgcaagctctgcaactcacct
gctctcgtcatgaaggaaggtcacaagcaatacgaagagacccagcgactgcttgcaaag
caaggcaccagtcttcgcgaccctatccacgcaccaaagctcactgctctccgagatctc
ctcgtcgactgtggaatcggtaccgaaccctcagccgagaatgaactcacgaccgaaaca
tcctacgtctctccccaccgagccctcatcttctgccaaatgaaggaaatgctcgacatg
gtccaaaacgacgtcttaaagaagatgttaccctctgtccaatacctccgcatggatggt
tcagtcgatgcatcgaagcgtcaagatatcgtcaataaattcaattcggacccttcatac
gatgtcttactcctaactacgagtgtcggtggtctcgggttgaatttgactggtgccgat
accgtcatcttcgtggaacacgactggaatccccagaaagacttacaggctatggatcgc
gctcatcgaattggtcagaagaaagtcgttaacgtctaccggttgattactaggggtacc
ttggaggagaaaatcatgtccctccaacgcttcaaaatcgacgtagcatccacagtagtc
aaccaacaaaacgcaggcctgggaaccatggaaacagaccaaatcctcgacctcttcaac
ctaggcgaaacagcagaaggcatcgacaaaccaaccttaaacggcgggaacggcgaggag
agagaggaggatatggtggatgccaccggagaggtgcgggagaaggggaagaaggggtgg
ttggatgatctgggggagctttgggatgataagcagtatgaggaggagtttgatttggat
gggtttttgaagactatgaagtag
DBGET
integrated database retrieval system