Mollisia scopiformis: LY89DRAFT_733025
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Entry
LY89DRAFT_733025 CDS
T04865
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
psco
Mollisia scopiformis
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psco03041
]
LY89DRAFT_733025
Enzymes [BR:
psco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
LY89DRAFT_733025
Spliceosome [BR:
psco03041
]
Complex C
Other components
Complex C specific factors
LY89DRAFT_733025
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
cobW
T2SSE
Cas3-like_C_2
AAA_23
AAA_19
AAA_30
Motif
Other DBs
NCBI-GeneID:
28829479
NCBI-ProteinID:
XP_018072705
JGI:
733025
UniProt:
A0A194XDT9
LinkDB
All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
MADFDLSANFIPSLHKPASLLPIAKHRQNLLYLIETYPVTIVVGQTGSGKTTQIPQYLEQ
AGWCSDGKIIAVTQPRRVAATIVAIRVAEEVGCEVGKEVGYSIRFEDVTSSATRIKFLTD
GLLLREALVDPLLSRYSVIMVDEAHERSLSTDVLLGVLKKILKRRPNDLRIIISSATLQA
EDFLRFFMNDEDLQPKSSKPKEVSLDELISESSSGPQDDAFGGKTGRIISLEGRMYPVDV
LYLETPAEDYVEKAVQTVFDIHTKEPDGDILVFLTGREEIDTAVQAISERAATLHPRAQT
VMPLPLYAGLSTEQQMYVFEEAPENTRKVIFSTNIAEASITIDGILYVIDCGFVKLRAYN
PLTGIETLTATPISKASATQRAGRAGRTKPGKCYRLYTEPSYHSLPTTTVPEIQRSNLAP
VILQLKALGIDNIARFPFLTSPPSALLIRALELLFSLGALDTYAKLTTPLGTRMAELAVE
PMMAKCLLSAPSFACLPEILTIAAMTSLGGNIFIHHHDGEKKKMETARRKFAAEEGDHIT
LLNVYQAFITRGRKEPKFCHENSLNFKALSRAVSIRAQLKRYLERFGIVVAETLSSSSNP
NHQPLPLTVGGRDKGEQIRRCLTTGFFAHAAKMQPDGTFRNVAGGTVLYAHPTSLMFNRK
ADWVVFHEVVETGNKTFIRDVTRIEKGWLVEYAPEFYKIR
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttcgacctctctgccaacttcattccttccctccacaaacccgcttcctta
ctgcccattgccaaacacaggcaaaatctcctctacctcatcgagacgtatcccgttacc
atcgtagttggtcaaaccggatcgggaaaaacaactcagataccacaataccttgaacag
gcaggatggtgctcagacggaaaaatcattgctgtcactcagcctcgtcgagtagcagca
actattgtggctattcgagtcgccgaagaagtgggttgcgaagtcggtaaagaagtcgga
tattcaatccgattcgaagacgttacttcttccgcaacccgcatcaaattcctcaccgat
ggactactactcagagaagctctagtagatcccctcttatcacgttactccgtgattatg
gtcgatgaagcccatgagagatcactgagtacggatgtcctcttgggtgtcctgaaaaag
atcctcaagcggagaccaaatgatcttcgaatcattatcagcagtgctactttgcaagct
gaagacttccttcgattcttcatgaacgatgaggatcttcagccaaagtcgtccaagccg
aaggaggtcagcttagatgagctcatctcggagagtagttctggacctcaagatgacgct
tttggaggcaagactggacggatcatcagtctcgaaggaagaatgtatcccgtcgacgtc
ctctatctagagactccagcagaagattacgttgaaaaagctgtacaaacagtattcgat
atccataccaaagagcccgatggagacattctcgtctttctcacaggccgagaagagatt
gatacagcagtccaagccatctcagagcgagcagccaccctacatccacgtgcccaaaca
gtaatgcctcttcctctctacgccggcctctcaacagaacagcaaatgtacgtatttgaa
gaagcacccgagaacaccaggaaagtcatcttctcaaccaacatcgccgaagcctccatc
accatcgacggaatcctctacgttatcgactgtggtttcgtcaaactccgcgcctacaac
cccttgacgggaatcgaaaccctaaccgcaacacccatctccaaagcctccgccacccaa
cgcgcaggacgagccggccgaaccaaacccggcaaatgctaccgcctctacacggaacca
agctaccactccctccccacgaccaccgtcccagagatccaacgctcgaacctcgccccc
gtgatcctgcaactcaaagccctgggcatcgacaacatagcccgcttccccttcctcacc
tccccgccctccgccctgctcatccgcgccctcgaactcctcttctccctcggcgccctc
gacacctacgccaagctgaccacccccctcgggacccgcatggccgagctagccgtcgaa
cccatgatggccaaatgtctcctctccgccccctccttcgcctgcctccccgagatcctc
accatcgccgccatgacctcgctcggcggcaacatattcatccaccaccacgacggcgag
aagaagaagatggaaaccgcgcgccggaaattcgccgcggaagaaggggaccatatcacg
ctcctaaacgtctatcaagcattcatcaccagaggccgaaaagagcccaagttctgccac
gagaattccctcaatttcaaagcgttgagtagagcggttagtatccgcgcccaactcaaa
cgctacctcgaacgcttcggcatcgtcgtcgcggaaacgctgtcctcttcttcaaaccct
aaccatcagcctctcccccttaccgtaggagggagagataagggggaacagatccgacgc
tgcttaacgacgggattcttcgcccatgcggcgaagatgcagcctgatgggacgttccgg
aatgtagcgggcggaacggtactatatgcgcatccgacgagcttgatgtttaatcgcaag
gcggattgggtggtttttcatgaggtggtggagacggggaataagacttttattagggat
gtgacgaggattgagaaggggtggttggtggagtatgcgccggagttttataagattagg
tag
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