KEGG   Mollisia scopiformis: LY89DRAFT_750435
Entry
LY89DRAFT_750435  CDS       T04865                                 
Name
(RefSeq) uncharacterized protein
  KO
K03141  transcription initiation factor TFIIH subunit 1
Organism
psco  Mollisia scopiformis
Pathway
psco03022  Basal transcription factors
psco03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    LY89DRAFT_750435
  09124 Replication and repair
   03420 Nucleotide excision repair
    LY89DRAFT_750435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psco03021]
    LY89DRAFT_750435
   03400 DNA repair and recombination proteins [BR:psco03400]
    LY89DRAFT_750435
Transcription machinery [BR:psco03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     LY89DRAFT_750435
DNA repair and recombination proteins [BR:psco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     LY89DRAFT_750435
SSDB
Motif
Pfam: BSD PH_TFIIH Rx_N
Other DBs
NCBI-GeneID: 28830926
NCBI-ProteinID: XP_018069518
JGI: 750435
UniProt: A0A194X4Q5
LinkDB
Position
Unknown
AA seq 636 aa
MAPSVKGLAAYKKKDGTLTISKDQKSILWQPVAPEKGLVINVADISNLQQTPESAAKVML
KIFEKSSAAPEPITHLFHFNSPLNPRGEANAVKDLLTNLIAAVKANDAAVSKPNGATPTS
AAMAIASAVTSKPNSGAPRWYDDAQLKLDIELQQSLMKKDPALNRTYMESRRTKPDAISD
SQFNSQFWSTRTGILRAHAVESNQKRGAYNVLSAVKPRQDGGELKLNISAEQIQLIFSQH
PLVKRVYDENVPKLNESEFWSRFFLSRLFKKLKGERIMETDSTDPCFDKYLDATNDDGLS
QRLLAAHIPNIIDLEGNEENQGGSKSGNRKDFTMRPGSTAKVPIIRTLNSLSEKIMAHVA
PSDVDPADPIGMDEETFNSLALRDLQGDPEEHRIMLNIKEQSRFFSNAKSAVSAEAALYA
KQVPSEVLFGLQTDLDPTMMESDGAGGLDLRAAIGVLEDSDSEDEEEKVGHVGSKASIAD
AQKHILEGIAARRLELDGSNTQSSLSGLSQKLFDRLTLTQATTTEFLHHFWLVFLSGDPD
RAGELAKMVETLERALDRINAVAADAEKEREETIKRQKQHIKDVYTTTGKKLQWSSSSVG
GGEKVVREMMEPTIKTLAKASREYRKALVAEGVDVS
NT seq 1911 nt   +upstreamnt  +downstreamnt
atggcgccgtcggtgaaagggctcgcggcctacaagaagaaagatggcaccttgaccatt
tctaaggaccaaaaatccatcctatggcagcctgtggcgccggaaaagggtctcgttata
aatgttgcagacatcagcaatctccaacagactcccgagtctgcagcaaaggtgatgctg
aagattttcgaaaagtcttcggccgcaccggagccaattactcaccttttccatttcaac
tcccctttaaacccacgtggagaagcaaatgccgtcaaagatctcttgactaacttgatt
gctgctgtcaaagcaaatgatgcagctgtctctaagccgaatggcgctacaccgacgtca
gcagccatggctatcgccagtgctgtgacatccaaaccaaactccggggcaccacgatgg
tatgacgatgctcagctcaagttagacatagagctccagcagtcactcatgaagaaagat
cctgctttgaataggacgtacatggagtcgaggcgtactaaaccagatgccatttcagac
tcgcaatttaattctcaattctggtctacacgaacgggcattctacgtgcacatgctgtt
gagtccaaccagaagcggggcgcctacaatgtgctctcggcggtgaaaccacgacaggac
ggtggcgaacttaagttgaacatcagcgcggaacagatccagttgatattcagtcagcac
ccgctcgtcaaacgtgtatatgatgagaatgttcctaaactcaacgaatctgagttctgg
tccagattcttcttaagtcgacttttcaagaaactcaagggagaacgcattatggagaca
gacagtacagacccttgctttgataagtatctcgatgctaccaacgatgacggtctgagt
cagagacttcttgcagcacatatcccgaacatcattgacctcgaggggaacgaggagaac
caaggaggctcgaagagcggcaatcgcaaggacttcaccatgcgaccaggatccacagcc
aaagtgcccataatccgcactctcaacagcctgagtgaaaagataatggctcatgttgcg
ccatccgatgtcgaccccgcagatccaatcggaatggatgaagaaaccttcaactcactt
gccttgcgagacctccagggcgacccggaagagcataggattatgctcaatatcaaggag
caaagtaggttcttctcgaatgcgaagtctgccgtttccgcggaggcagcgttatatgcc
aagcaagtaccttcagaagtcttgtttggtctgcagacagatcttgacccaacgatgatg
gaaagcgatggtgccggtggtctagatttgcgcgccgctatcggtgtcttggaagatagt
gacagcgaggatgaggaggagaaagttggccatgtggggagcaaggctagcattgcagat
gctcagaagcatatattagagggcattgctgctcgacgcttggaacttgatggctcaaat
actcagtcgtctctgtcaggattgtcgcaaaaactattcgacagattgactctaactcag
gcaactactaccgagttccttcatcacttttggctcgtcttcctgtctggtgatccagat
cgagcgggtgagcttgcgaaaatggttgagacgctggaaagggctctcgacagaatcaat
gctgtggctgctgatgcagagaaggaaagagaagaaaccataaaaaggcagaagcagcac
atcaaagatgtgtatacaacgacaggaaagaaactccagtggagttctagttctgttggt
ggtggggagaaagttgtaagagaaatgatggagcctacgatcaagacgctggcgaaagca
tcaagggaatacagaaaagcattggttgccgaaggcgtggatgtttcttga

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