KEGG   Mollisia scopiformis: LY89DRAFT_751486
Entry
LY89DRAFT_751486  CDS       T04865                                 
Name
(RefSeq) Coatomer, alpha subunit
  KO
K05236  coatomer subunit alpha
Organism
psco  Mollisia scopiformis
Brite
KEGG Orthology (KO) [BR:psco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:psco04131]
    LY89DRAFT_751486
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psco04147]
    LY89DRAFT_751486
Membrane trafficking [BR:psco04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    LY89DRAFT_751486
Exosome [BR:psco04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   LY89DRAFT_751486
  Exosomal proteins of bladder cancer cells
   LY89DRAFT_751486
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 TPR_COPA_B WD40_CDC20-Fz WDR55 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_SCAP WD40_MABP1-WDR62_2nd WD40_RFWD3 ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_IFT140_1st TPR_IFT80_172 CCL2-like
Other DBs
NCBI-GeneID: 28830949
NCBI-ProteinID: XP_018069222
JGI: 751486
UniProt: A0A194X4Y3
LinkDB
Position
Unknown
AA seq 1222 aa
MASSSSPNMLTKFESKSSRAKGIAFHPKRPWILVSLHSSTIQLWDYRMGTLIDRFEEHDG
PVRGIDFHKTQPLFVSGGDDYKIKVWSYQTRRCLFTLNGHLDYVRTVFFHHELPWIISSS
DDQTIRIWNWQNRSLICTMTGHNHYTMCAQFHPKDDLVVSASLDQSVRVWDISGLRKKHS
APTSMTFEDQMSRGNQNQADMFGNTDAVVKFVLEGHDRGVNWVAFHPTLPLIVSAGDDRL
VKLWRMSETKAWEVDTCRGHFQNASGCLFHPHQDLILSVGEDKTIRVWDLNKRTSVQSFK
RENDRFWVIAAHPEINLFAAGHDNGVMVFKLERERPASAFHQNNLFFITKEKHVRSYDFQ
KNIESPTLLTLKKLGSPWVPPRSLSYNPAERAILVTSPADGGSYELINLPRDGSGSMDPT
DTKRGQGNSAVFVQRNRFAVFNASNQQIDIKDLANSTTKTIKPPTGTTDIYFGGPGNLLL
ITPTAVHLYDIQQKKSVAELAVSGVKYVVWKNDNSYVALLSKHNVTVATKTLEQVSTLHE
TIRIKSATWDDAGVLLYSTLNHIKYTLLNGDNGIVRTLDQTVYLVHVKARTVYCLDRSAK
PKILNIDPTEYRFKLALVKRNYAEMLSIIKNSSLVGQSIISYLQKKGYPEIALQFVQDPQ
TRFELAIECGNLEVAVEMAKQLDRPKLWSRLTTEALAHGNHQIVEMAYQKLRQFDKLSFL
YLATGDEAKLNRMAKIAEHRGDFTARFQNALYLGDVTDRIAMFKEIDLYPLAYMTAKSHG
LEEECESILEATGLTEEQISLPAIGSPLSPPKPAVSTFKANWPTKATSQSFFEKALLGQV
EGLSLEDEPAAASNGFGFDEAGEDDAAKREGNLIDEEEDDDAAGWDMGEDIPEVESDFVN
VDSAEAGAGSSEAELWARNSPIAADHVAAGSFETAMQLLNRQLGAVNFAPLKPRFLEVYQ
ATKTYLPASTGLPPLINYVRRTVDQTDPRKVLPIIPRDIESLASEDLQKGYTAMRTNKLE
DGATIFKGILHALLVNAVSAPAEVEEAKKLITTACEYTIAMAIELSRRKLGSDAEVAKSP
AQLKRSLELAAYFTIPKLEVPHRQIALTSAMKLAYQNKNLNSALSFANRMIANGGATKML
DNARKIKAQCERNPNDAHEIEFDQFAEFDICAASQTPIYSGTSFETCAFDGSKYHSKYKG
TVCTVCGVCEVGKTGSGLRLTA
NT seq 3669 nt   +upstreamnt  +downstreamnt
atggcgtcctcctcctctcccaacatgctcacaaagtttgagtcaaaatcttcgagggca
aagggcattgctttccaccccaagagaccgtggatcttagtttcgctacactcctccacc
attcaattatgggattatcgaatgggaactctgattgatcgattcgaggaacacgacgga
ccagttcggggcatcgacttccataagacacaacccctctttgtttctggtggagatgat
tacaagatcaaggtctggtcgtatcaaactcgcagatgtctattcaccttgaacggccat
cttgattatgtccgcactgtcttctttcaccacgagctcccttggatcatttccagctcg
gatgaccaaacaattagaatatggaattggcaaaacagatctctgatatgcaccatgaca
ggccataatcactataccatgtgcgctcaattccatccgaaggacgatttagttgtttct
gcctcattggatcaatctgtccgtgtgtgggatatttctggtttacgaaagaagcattcg
gcgcctacatcaatgaccttcgaggatcagatgtcgcggggaaatcaaaaccaagcagac
atgttcggaaatactgatgctgtggtcaaattcgttttggaggggcacgaccgaggtgta
aattgggtggcttttcatcctacattacctcttattgtgtccgctggcgatgacagactc
gttaagttatggagaatgagcgagacaaaggcgtgggaagttgatacttgccgagggcat
ttccaaaatgcttcaggctgtttgttccatccccatcaggatctgatcctctccgtaggc
gaggacaagactatccgagtttgggatctcaacaagcgtacatcggtccaatcgttcaag
cgagagaacgatcgattttgggtcattgcagctcatccggagatcaatctgtttgctgcc
ggccatgacaacggcgtaatggtgttcaagcttgagcgagaacgtcctgcgtcagctttc
caccagaataacctcttctttattaccaaggagaagcatgttcgctcttatgatttccag
aagaatatcgagagccctacgctgttgacgcttaagaagctgggaagtccttgggttcca
ccccggtctctatcttacaaccctgctgagagagctatccttgtaacttcgccagctgat
ggtggctcctacgaactgatcaacctgcctcgagatggttctgggtccatggatcctacc
gacacgaagcgtggacaaggaaattctgccgtcttcgttcagcgaaatcgctttgctgtc
ttcaatgcctctaatcagcagattgacattaaggaccttgcaaactcgacgacaaagacc
atcaaaccacctactggtacaactgacatctattttggtggacccggcaaccttctccta
attacgcccaccgctgttcacttgtacgacatccagcagaagaagtccgtagcagaactt
gctgtcagtggagtgaagtatgttgtttggaagaatgataattcatatgttgctcttttg
agcaagcacaatgtcactgttgcgacaaagactctcgagcaagtcagcactcttcacgag
actatccggatcaagagcgcaacctgggatgatgctggtgttctactatactcgacgttg
aaccacatcaagtacacgctccttaatggcgataacgggatcgtacgaactcttgatcag
actgtctaccttgtgcatgtcaaggcgcgcactgtgtactgcttggatagaagtgcaaag
cccaagatcttgaacattgatcccacagagtataggttcaagctcgcacttgtgaagcga
aattatgcggagatgttatcaatcatcaagaattccagtcttgtgggtcaaagcatcatt
tcatacctgcaaaagaagggataccctgagatcgctcttcaattcgtccaagacccccaa
actcggtttgaactcgcaattgagtgtggcaatcttgaggttgctgttgagatggccaag
caattggacaggccaaagctctggtcgcggcttacaacagaagctctcgcccatggaaac
caccaaattgttgagatggcataccagaagttaagacagttcgacaaattgtcgttcctt
tacctcgccactggcgatgaagccaaactcaatagaatggcaaagattgctgagcatcgt
ggcgacttcactgctcgctttcagaatgctttatacctgggtgatgtcactgaccggatt
gcaatgttcaaggagatagacctctatcctcttgcttatatgactgccaagtcgcatgga
ttggaggaggagtgcgaatcgattctggaggctactggactcacagaagagcagatttcg
cttcctgctattggctcaccgctctcaccaccgaaacctgctgtgtcgactttcaaggcg
aactggccaaccaaggctacctcacagtcattcttcgagaaggctctgcttggtcaagtt
gaaggattgtccttggaggatgaacctgccgcagcctcaaatggcttcggctttgacgaa
gctggtgaggatgatgctgcaaagcgagaaggcaacctcatcgatgaagaagaggatgac
gatgctgccggctgggacatgggcgaagacattccagaagttgaaagtgacttcgtcaac
gtcgacagcgcagaagcaggtgcaggcagcagtgaagcagagctctgggctagaaactcg
cccattgctgcagatcacgtggctgccggttctttcgaaactgctatgcagcttttgaac
cgacaacttggagcagtgaactttgcgcctctgaagccccgtttccttgaagtttaccag
gctacgaaaacctacctccctgcctctaccgggcttccaccactaatcaactacgttcga
agaacagttgaccagactgatccccgcaaggtcctacccattattcccagagacatcgag
tcacttgccagcgaggatttgcagaaggggtataccgccatgcgaaccaacaaacttgag
gacggcgccactatcttcaaaggaattcttcatgcgctcctcgtcaatgctgtctctgcc
cctgctgaggtcgaggaagccaagaagctcatcactactgcatgcgagtacaccattgcc
atggccattgagttgtccaggagaaagcttggttccgatgcagaagtcgccaaatctcca
gctcagctcaagcgaagcttagagctcgctgcctacttcaccattcctaagttggaggtg
ccacataggcaaatagctctgacgagtgcgatgaaattggcctaccagaacaagaacctt
aactctgctctgagctttgccaatagaatgatagccaatggcggggccaccaagatgctg
gacaacgcacgaaagatcaaggcacaatgtgaacgtaaccccaacgatgcccacgagatt
gaatttgatcaattcgcggagttcgatatctgtgctgcttcacaaacgcctatctactca
ggtacatccttcgaaacctgcgcctttgacggtagcaagtatcactccaaatacaagggc
acagtatgcactgtctgtggtgtctgtgaagtcggaaagactggaagtggattgaggttg
acagcgtga

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