Mollisia scopiformis: LY89DRAFT_751486
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Entry
LY89DRAFT_751486 CDS
T04865
Name
(RefSeq) Coatomer, alpha subunit
KO
K05236
coatomer subunit alpha
Organism
psco
Mollisia scopiformis
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psco04131
]
LY89DRAFT_751486
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psco04147
]
LY89DRAFT_751486
Membrane trafficking [BR:
psco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
LY89DRAFT_751486
Exosome [BR:
psco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
LY89DRAFT_751486
Exosomal proteins of bladder cancer cells
LY89DRAFT_751486
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
TPR_COPA_B
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_Nup120_160
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
TPR_IFT80_172
CCL2-like
Motif
Other DBs
NCBI-GeneID:
28830949
NCBI-ProteinID:
XP_018069222
JGI:
751486
UniProt:
A0A194X4Y3
LinkDB
All DBs
Position
Unknown
AA seq
1222 aa
AA seq
DB search
MASSSSPNMLTKFESKSSRAKGIAFHPKRPWILVSLHSSTIQLWDYRMGTLIDRFEEHDG
PVRGIDFHKTQPLFVSGGDDYKIKVWSYQTRRCLFTLNGHLDYVRTVFFHHELPWIISSS
DDQTIRIWNWQNRSLICTMTGHNHYTMCAQFHPKDDLVVSASLDQSVRVWDISGLRKKHS
APTSMTFEDQMSRGNQNQADMFGNTDAVVKFVLEGHDRGVNWVAFHPTLPLIVSAGDDRL
VKLWRMSETKAWEVDTCRGHFQNASGCLFHPHQDLILSVGEDKTIRVWDLNKRTSVQSFK
RENDRFWVIAAHPEINLFAAGHDNGVMVFKLERERPASAFHQNNLFFITKEKHVRSYDFQ
KNIESPTLLTLKKLGSPWVPPRSLSYNPAERAILVTSPADGGSYELINLPRDGSGSMDPT
DTKRGQGNSAVFVQRNRFAVFNASNQQIDIKDLANSTTKTIKPPTGTTDIYFGGPGNLLL
ITPTAVHLYDIQQKKSVAELAVSGVKYVVWKNDNSYVALLSKHNVTVATKTLEQVSTLHE
TIRIKSATWDDAGVLLYSTLNHIKYTLLNGDNGIVRTLDQTVYLVHVKARTVYCLDRSAK
PKILNIDPTEYRFKLALVKRNYAEMLSIIKNSSLVGQSIISYLQKKGYPEIALQFVQDPQ
TRFELAIECGNLEVAVEMAKQLDRPKLWSRLTTEALAHGNHQIVEMAYQKLRQFDKLSFL
YLATGDEAKLNRMAKIAEHRGDFTARFQNALYLGDVTDRIAMFKEIDLYPLAYMTAKSHG
LEEECESILEATGLTEEQISLPAIGSPLSPPKPAVSTFKANWPTKATSQSFFEKALLGQV
EGLSLEDEPAAASNGFGFDEAGEDDAAKREGNLIDEEEDDDAAGWDMGEDIPEVESDFVN
VDSAEAGAGSSEAELWARNSPIAADHVAAGSFETAMQLLNRQLGAVNFAPLKPRFLEVYQ
ATKTYLPASTGLPPLINYVRRTVDQTDPRKVLPIIPRDIESLASEDLQKGYTAMRTNKLE
DGATIFKGILHALLVNAVSAPAEVEEAKKLITTACEYTIAMAIELSRRKLGSDAEVAKSP
AQLKRSLELAAYFTIPKLEVPHRQIALTSAMKLAYQNKNLNSALSFANRMIANGGATKML
DNARKIKAQCERNPNDAHEIEFDQFAEFDICAASQTPIYSGTSFETCAFDGSKYHSKYKG
TVCTVCGVCEVGKTGSGLRLTA
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctcctcctctcccaacatgctcacaaagtttgagtcaaaatcttcgagggca
aagggcattgctttccaccccaagagaccgtggatcttagtttcgctacactcctccacc
attcaattatgggattatcgaatgggaactctgattgatcgattcgaggaacacgacgga
ccagttcggggcatcgacttccataagacacaacccctctttgtttctggtggagatgat
tacaagatcaaggtctggtcgtatcaaactcgcagatgtctattcaccttgaacggccat
cttgattatgtccgcactgtcttctttcaccacgagctcccttggatcatttccagctcg
gatgaccaaacaattagaatatggaattggcaaaacagatctctgatatgcaccatgaca
ggccataatcactataccatgtgcgctcaattccatccgaaggacgatttagttgtttct
gcctcattggatcaatctgtccgtgtgtgggatatttctggtttacgaaagaagcattcg
gcgcctacatcaatgaccttcgaggatcagatgtcgcggggaaatcaaaaccaagcagac
atgttcggaaatactgatgctgtggtcaaattcgttttggaggggcacgaccgaggtgta
aattgggtggcttttcatcctacattacctcttattgtgtccgctggcgatgacagactc
gttaagttatggagaatgagcgagacaaaggcgtgggaagttgatacttgccgagggcat
ttccaaaatgcttcaggctgtttgttccatccccatcaggatctgatcctctccgtaggc
gaggacaagactatccgagtttgggatctcaacaagcgtacatcggtccaatcgttcaag
cgagagaacgatcgattttgggtcattgcagctcatccggagatcaatctgtttgctgcc
ggccatgacaacggcgtaatggtgttcaagcttgagcgagaacgtcctgcgtcagctttc
caccagaataacctcttctttattaccaaggagaagcatgttcgctcttatgatttccag
aagaatatcgagagccctacgctgttgacgcttaagaagctgggaagtccttgggttcca
ccccggtctctatcttacaaccctgctgagagagctatccttgtaacttcgccagctgat
ggtggctcctacgaactgatcaacctgcctcgagatggttctgggtccatggatcctacc
gacacgaagcgtggacaaggaaattctgccgtcttcgttcagcgaaatcgctttgctgtc
ttcaatgcctctaatcagcagattgacattaaggaccttgcaaactcgacgacaaagacc
atcaaaccacctactggtacaactgacatctattttggtggacccggcaaccttctccta
attacgcccaccgctgttcacttgtacgacatccagcagaagaagtccgtagcagaactt
gctgtcagtggagtgaagtatgttgtttggaagaatgataattcatatgttgctcttttg
agcaagcacaatgtcactgttgcgacaaagactctcgagcaagtcagcactcttcacgag
actatccggatcaagagcgcaacctgggatgatgctggtgttctactatactcgacgttg
aaccacatcaagtacacgctccttaatggcgataacgggatcgtacgaactcttgatcag
actgtctaccttgtgcatgtcaaggcgcgcactgtgtactgcttggatagaagtgcaaag
cccaagatcttgaacattgatcccacagagtataggttcaagctcgcacttgtgaagcga
aattatgcggagatgttatcaatcatcaagaattccagtcttgtgggtcaaagcatcatt
tcatacctgcaaaagaagggataccctgagatcgctcttcaattcgtccaagacccccaa
actcggtttgaactcgcaattgagtgtggcaatcttgaggttgctgttgagatggccaag
caattggacaggccaaagctctggtcgcggcttacaacagaagctctcgcccatggaaac
caccaaattgttgagatggcataccagaagttaagacagttcgacaaattgtcgttcctt
tacctcgccactggcgatgaagccaaactcaatagaatggcaaagattgctgagcatcgt
ggcgacttcactgctcgctttcagaatgctttatacctgggtgatgtcactgaccggatt
gcaatgttcaaggagatagacctctatcctcttgcttatatgactgccaagtcgcatgga
ttggaggaggagtgcgaatcgattctggaggctactggactcacagaagagcagatttcg
cttcctgctattggctcaccgctctcaccaccgaaacctgctgtgtcgactttcaaggcg
aactggccaaccaaggctacctcacagtcattcttcgagaaggctctgcttggtcaagtt
gaaggattgtccttggaggatgaacctgccgcagcctcaaatggcttcggctttgacgaa
gctggtgaggatgatgctgcaaagcgagaaggcaacctcatcgatgaagaagaggatgac
gatgctgccggctgggacatgggcgaagacattccagaagttgaaagtgacttcgtcaac
gtcgacagcgcagaagcaggtgcaggcagcagtgaagcagagctctgggctagaaactcg
cccattgctgcagatcacgtggctgccggttctttcgaaactgctatgcagcttttgaac
cgacaacttggagcagtgaactttgcgcctctgaagccccgtttccttgaagtttaccag
gctacgaaaacctacctccctgcctctaccgggcttccaccactaatcaactacgttcga
agaacagttgaccagactgatccccgcaaggtcctacccattattcccagagacatcgag
tcacttgccagcgaggatttgcagaaggggtataccgccatgcgaaccaacaaacttgag
gacggcgccactatcttcaaaggaattcttcatgcgctcctcgtcaatgctgtctctgcc
cctgctgaggtcgaggaagccaagaagctcatcactactgcatgcgagtacaccattgcc
atggccattgagttgtccaggagaaagcttggttccgatgcagaagtcgccaaatctcca
gctcagctcaagcgaagcttagagctcgctgcctacttcaccattcctaagttggaggtg
ccacataggcaaatagctctgacgagtgcgatgaaattggcctaccagaacaagaacctt
aactctgctctgagctttgccaatagaatgatagccaatggcggggccaccaagatgctg
gacaacgcacgaaagatcaaggcacaatgtgaacgtaaccccaacgatgcccacgagatt
gaatttgatcaattcgcggagttcgatatctgtgctgcttcacaaacgcctatctactca
ggtacatccttcgaaacctgcgcctttgacggtagcaagtatcactccaaatacaagggc
acagtatgcactgtctgtggtgtctgtgaagtcggaaagactggaagtggattgaggttg
acagcgtga
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integrated database retrieval system