Mollisia scopiformis: LY89DRAFT_778319
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Entry
LY89DRAFT_778319 CDS
T04865
Name
(RefSeq) PROCN-domain-containing protein
KO
K12856
pre-mRNA-processing factor 8
Organism
psco
Mollisia scopiformis
Pathway
psco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LY89DRAFT_778319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psco03041
]
LY89DRAFT_778319
Spliceosome [BR:
psco03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
LY89DRAFT_778319
Complex C
U5 SnRNP specific factors
LY89DRAFT_778319
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
RRM_4
PROCT
JAB
Motif
Other DBs
NCBI-GeneID:
28831925
NCBI-ProteinID:
XP_018076328
JGI:
778319
UniProt:
A0A194XP60
LinkDB
All DBs
Position
Unknown
AA seq
2360 aa
AA seq
DB search
MSSIPPPPPPGWSSGPPSMGAPPGAPPPPGYRPPADPQVAKFAQKKKEWLRSQRNRFGEK
RKGGFVETQKADMPPEHLRKIVKDIGDVSQKKFSSDKRSYLGALKYMPHAVMKLLENMPM
PWESAREVKVLYHVNGCLTLVNETPRVIEPVFHAQWATMWMCMRREKSDRRHFKRMRFPP
FDDEEPPLSWSENIEDVEPLEPIQMELDENEDGAVFEWLYENRPLLDTPHVNGPSYKEWN
LTLPQMATLYRLSHQLLSDLVDKNYFHMFELNSFLTAKALNVAIPGGPRFEPLYKDVDPN
DEDFGEFNAIDRIIFRAPIRTEYRVAFPFLYNSLPRSVKLSWYSHPQIVYVRAEDPSLPA
FYFDPVINPISSRSVAPKNITVSHEDEIFGPGNNEEPEENAFELPEDVEPFLADEELYTD
ETASAIALWWAPFPFDRRSGRMVRAQDVPLVKQWYLEHCPQGQPVKVRVSYQKLLKTYVL
NELHKKKPKAQNKQSLMKSLKQTKFFQQTTIDWVEAGLQVCRQGFNMLNLLIHRKNLTYL
HLDYNFNLKPVKTLTTKERKKSRFGNAFHLMREILKLTKLIVDAQVQYRLGNIDAFQLAD
GILYAFNHVGQLTGMYRYKYKLMHQIRSCKDLKHLIYYRFNSGPVGKGPGCGFWAPAWRV
WLFFMRGIIPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASVMADLMDM
MPEGIKQNKVNTVLQHLSEAWRCWKSNIPWKVPGLPAPIENIILRYVKSKADWWISVAHY
NRERIRRGATVDKTVAKKNLGRLTRLWLKAEQERQHNYMKDGPYVSSEEAVAIYTTTVHW
LESRKFSPIPFPSVSYKHDTKILILALERLREAYSVKGRLNQSQREELALIEQAYDSPGT
TLERIKRFLLTQRAFKEVGIDMNDNYSTINPVYDIEPIEKISDAYLDQYLWYQADQRHLF
PAWIKPSDSEVPPLLTYKWAQGINNLDKVWESADGECNVMIETQLSKVYEKIDLTLLNRL
LRLIMDHNLADYISSKNNVQLTYKDMNHVNSYGMIRGLQFSAFVFQYYGLVLDLLLLGLQ
RASEIAGPPQSPNDFLQFRDRDTETRHPIRLYTRYIDRIWVFFRFTADESRDLIQRFLTE
QPDPNFENVIGYRNKKCWPRDSRMRLMRHDVNLGRAVFWDLKNRLPRSVTTIEWDDTFAS
VYSRDNPNLLFSMCGFEVRILPKIRNQNDEFPVKDSVWSLVDNTSKERTAHAFLQVTEED
IAKFNNRIRQILMSSGSTTFTKIANKWNTSLIALFTYYREAAVSTVNLLDTIVKCETKIQ
TRVKIGLNSKMPSRFPPAVFYTPKELGGLGMISGSHILIPTSDKRWSKQTDSGVTHYRAG
MTHDEETLIPNIFRYIIPWEAEFIDSQRVWTEYSQKRQEANQQNRRLTLEDLEDSWDRGL
PRINTLFQKDRSTLSFDKGFRARTEFKTYQLMKSNPFWWTSQRHDGKLWNLNAYRTDVIQ
ALGGVETILEHTLFKATAFPSWEGLFWEKASGFEESMKFKKLTNAQRSGLNQIPNRRFTL
WWSPTINRANVYVGFQVQLDLTGIFLHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQV
FDQELEQLGIETVQKETIHPRKSYKMNSSCADILLFASHKWNVTRPSILFDTKDVIEPTT
TNKFWVDVQLRYGDYDSHDIERYVRAKYLDYTTDSMSIYPSATGLMIGIDLAYNLYSAYG
QYFPGLKTLIQQAMAKIMKANPALYVLRERIRKGLQLYASESNQEFLNSQNYSELFSNQI
QLFIDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQL
AKWKTAEEVAALIRSLPVEEQPKQLIVTRKGLLDPLEVHLLDFPNISIRASELQLPFQAA
MKVEKLGDMILRATEPQMVLFNLYDEWLKSISSYTAFSRLVLILRALHVNQDKTKLLLRP
DKTVITQEHHIWPSLSDEDWIKVETQLRDLILNDYGKKNNVNTSSLTMSEVRDIILGMEI
SAPSMQRQQAAEIEKQQQEQQQLTAVTTKTQNVHGEDIIVTTTSQFEQQTFASKTEWRTR
AIATSNLRTRANNIYISSDDIKEDDHFTYIMPKNILKRFITIADLRVQVAGYLYGSSPPD
NDQVKEIQCIVMVPQIGSTRDVQLPQQLPQHEYLEHMEPLGIIHTVSGNEPPYMTAMDVT
QHARLMNVHKEWDRKTISMTVSFTPGSVSLASWALTPQGYTWGCENKDMGSDQPQGFSTS
MGEKCQLLLSDKIRGYFLVPENNSWNYSFMGSSFAGLEKKNVHVKVDTPLPFYSDQHRPL
HFQSFMELEDIFVDHEDPYA
NT seq
7083 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcaatacctcctccccctccacctggatggagctccgggcctccttcgatgggc
gcgcctcctggagctcctccaccacctggatataggcctccagcggaccctcaggtggcc
aaattcgcacagaagaagaaggaatggttacgatcacaacgaaatcgattcggcgagaag
aggaagggcggcttcgttgaaacgcagaaggctgatatgccaccggagcatcttcgaaag
atcgtgaaagatatcggagatgtttctcagaaaaagttcagcagcgacaagcgcagttat
cttggagccctgaaatacatgcctcacgccgttatgaagctattggagaatatgccgatg
ccctgggagtcagcgagggaggtcaaggttctatatcacgttaatggctgtctgacgtta
gtcaacgaaacaccgagagtcattgagccggtcttccacgcacaatgggctacgatgtgg
atgtgtatgaggagagagaagagcgaccgaagacatttcaagagaatgcgattcccaccc
ttcgatgacgaagagccacctctttcctggtccgagaacattgaagatgttgagcctttg
gaaccgattcagatggaacttgacgaaaacgaagatggagctgttttcgagtggctctac
gagaatcggcctcttcttgatactccacatgtgaatggtccaagttacaaggaatggaac
ctcacacttcctcagatggcaactttatatcgactgagtcaccagcttctgagtgatctt
gttgataagaactactttcacatgtttgagctgaacagcttcttgacagcgaaggcgttg
aatgttgctatccctggaggaccaagattcgaaccactgtacaaagacgttgatcccaac
gacgaagactttggcgaattcaatgccatcgatcgtatcattttccgcgcacccatccgt
acagaataccgggtagcgtttcctttcttgtacaattctttgccacgcagcgtgaagctg
tcttggtattcacatcctcaaattgtgtatgttcgcgctgaggatccgagtttaccagct
ttctatttcgaccctgtcattaatcccatttcatcgagatctgttgcaccgaagaacata
actgtcagccacgaggacgagattttcggcccaggaaacaacgaagagccagaggagaat
gctttcgaactccctgaagatgtcgaaccgtttctggccgacgaagagttgtacacagac
gagactgcttctgcaattgcgctatggtgggctcctttcccatttgaccgacgttcggga
cgcatggtccgagcacaagacgtgcccctcgtaaaacagtggtatcttgagcattgccca
caaggccagccagtgaaggtacgagtatcgtatcaaaagctactgaagacttatgtcttg
aatgagctccacaaaaagaagccaaaggcgcaaaacaagcaaagtctgatgaagtcgctg
aaacaaaccaaattctttcagcagaccacgatcgattgggttgaagctggtcttcaagtt
tgtcgccagggtttcaacatgctcaacctcttgatccatcgaaagaacttgacctacctc
catctcgattacaacttcaacctcaagccagtcaagacacttaccaccaaagagcgaaag
aagtctcgctttggaaatgccttccatctcatgcgtgagattttgaagttaacgaagttg
attgtcgacgcccaggttcagtaccgacttggtaacatcgatgcattccagctcgcagat
ggtatcttgtatgcctttaatcatgttggccagctgactgggatgtatcgatacaagtac
aagctcatgcatcagattcgatcgtgtaaggatctgaagcatttaatctattatcggttc
aattcgggccctgtcggcaaaggccccggatgtggtttctgggctcctgcttggagagtc
tggctcttcttcatgcgagggatcattcccttgcttgagcgatggcttggaaacttgctt
tcccgacaatttgaaggtagacacagtaaaggtgtcgccaaaactgtaacgaagcagcgt
gtggagtcacatttcgaccttgagctccgcgcctcagtcatggctgacttgatggacatg
atgcccgagggaattaagcaaaacaaagtcaatactgtcttacagcatctctccgaagca
tggcgatgctggaagagtaacattccttggaaggtccctggtttgccagcccctatcgag
aatatcatcttgcgttatgtgaagagcaaagcagattggtggatttctgtggcccattac
aacagagaacgtattcgcagaggtgctaccgttgataagacagtcgcgaagaagaaccta
gggcgcctcactcgactatggctcaaggctgagcaagaacgccaacacaattacatgaag
gacgggccttatgtatcgtctgaagaggctgtcgcaatttacaccactaccgttcattgg
ctcgaatcacgaaaattctcccccattcctttccccagcgtctcttacaagcacgacacc
aagattcttattctggccctagagcgattgcgagaagcttattccgtcaaaggccgcctg
aaccaaagccaacgtgaagagcttgctttgattgagcaagcttacgatagtcccggaacc
acactggagagaattaaaagattccttcttactcaacgagcattcaaggaagttggtatc
gacatgaatgataactacagtaccatcaaccctgtctacgacattgagccaattgaaaaa
ataagcgacgcctatcttgatcagtacctttggtatcaagcagaccagcgccatttgttc
cctgcgtggatcaaaccttctgattctgaagtcccgccattgcttacttacaagtgggct
cagggtatcaacaaccttgacaaggtctgggagagtgctgatggagaatgcaacgtcatg
attgagacccagctttccaaggtgtacgagaagatcgatctaactcttcttaatcgcttg
ttgagacttatcatggaccacaatcttgctgattatatctcatcgaagaacaatgttcag
ctcacctacaaagatatgaatcacgtaaacagctatggaatgatccgtggtctccaattc
tcagcattcgtatttcaatattacggacttgtccttgacctactcttgctaggtctccag
cgcgcgagcgagattgcaggtccacctcaaagcccgaacgatttcctccagtttcgcgat
cgggatacggagaccaggcatccaattagattgtatacaagatacatcgatcgaatctgg
gtgttctttcgcttcacagctgacgagtcaagagaccttattcagcgctttctcactgag
cagccagatcccaatttcgagaacgtgatcggttacagaaacaagaagtgttggcccaga
gactcgcggatgcgactcatgagacacgatgtcaaccttgggcgagctgtattctgggac
ttgaagaacagattacctagatctgtgactacaatcgaatgggatgataccttcgcaagt
gtttacagcagagataatcccaatctcctgttctccatgtgtggctttgaggtccgaatt
cttcccaagattcgtaaccagaacgacgaattcccggtcaaagacagcgtttggtctcta
gtcgacaatacaagtaaggagaggaccgcgcatgctttcctgcaggtcacagaggaagac
attgctaaatttaataaccgcatccgtcaaatcctcatgtcttctggatcaaccactttc
actaaaatcgccaacaagtggaataccagcttgattgctcttttcacttactatcgtgag
gcagcagtctcgactgtcaatttgcttgacaccattgtgaagtgcgagacgaagattcag
accagagtaaagattggtttgaattcgaagatgccttccaggttcccaccagcagtcttc
tatacgccaaaggaattgggtggcttgggtatgatctcaggttctcacatcctcattcca
acgagcgacaagcggtggtcaaagcaaacagatagtggcgttacccattaccgggctggt
atgacccacgatgaggagactctgattcccaacatcttcagatacattatcccgtgggag
gctgaattcatcgactcgcaacgggtatggaccgagtattctcagaagcgacaggaagcc
aatcaacagaatcgacgactcacactcgaggacttagaagacagctgggaccgtggtttg
ccccgtatcaacactctgttccagaaggacagaagcactttgagttttgacaagggattc
cgagcccgaactgagttcaagacgtatcaacttatgaagagtaatccattttggtggact
agtcaacgtcacgatggaaagctatggaacttaaatgcttatcggacagatgtgatccaa
gcacttggtggtgtcgaaacaatcttagagcacactctgttcaaagccactgcgttccca
tcctgggaaggtttgttttgggagaaggcttcaggcttcgaagagtctatgaagtttaag
aaattgaccaacgcccagaggtctggtttgaaccagatccctaaccgtcgcttcactcta
tggtggtcaccaacgattaacagagctaacgtatacgttggtttccaagtgcaactggac
ctgacgggtattttcctccacggaaagattccgacccttaaaatttctttgatccagatc
ttcagagcccatttgtggcaaaagatccacgagtccgtggtgatggatttgtgtcaagta
tttgaccaggaacttgagcaacttggtattgagactgtgcaaaaggaaaccatccatccc
agaaagtcgtacaagatgaacagttcttgtgcagacattctgctatttgcaagtcacaaa
tggaacgtcaccaggccatccatcctattcgacacgaaggacgtgattgagcccacgacc
accaataaattctgggttgatgtccagctccgttatggagattatgattcccacgatatt
gaacgatacgtgcgtgcgaagtacctcgactacacaacagatagcatgagcatttatcct
tctgctactggtctcatgatcggtatcgatcttgcgtacaatctttactcggcttatggt
caatacttcccaggtctgaagacgctcattcaacaggctatggcgaagatcatgaaagca
aaccctgccttgtatgtgctcagagaacgtatcagaaagggtctccagctctatgcttct
gaaagcaaccaagagttcttgaattctcaaaattactcagagctattcagcaaccagatc
cagctgttcatcgacgacaccaatgtctatcgagtcacaattcacaaaactttcgaaggc
aatttgactacgaaacccatcaacggcgcaatcttcattttcaatccacgtactggtcaa
ctgttcctcaagatcattcacacgagtgtttgggctggtcagaaacgtcttggtcaattg
gctaaatggaagactgccgaagaagtcgctgctctgattcgatccctacctgttgaagaa
cagccgaaacagttgattgtcactcgaaagggtcttctcgatcctcttgaagtgcatctt
ctagacttccccaacatttcaattagggcctctgagctccaattaccattccaagctgcc
atgaaggtcgaaaagcttggtgacatgattcttcgagctaccgagccacagatggttcta
ttcaacttgtacgatgaatggttgaagtccatttcttcatacacggcgttttctcgactg
gtcttgatcttacgtgctcttcatgtgaaccaagacaagacgaaattgctactgagacca
gacaagaccgtcatcacccaagaacatcacatttggccaagtctgtcagatgaggattgg
atcaaggttgagacgcaattacgagatctcatcctaaatgactacggcaagaagaacaat
gtcaacacttcaagcttgaccatgagtgaagttcgagacattattctcggaatggaaatt
agcgccccgtcaatgcagcgtcaacaagcagcggagatcgagaagcaacaacaagaacag
caacagctcacggctgtgaccaccaagacacaaaacgtgcacggagaagacatcattgtg
actactacttcccaattcgagcagcagacctttgcatccaagactgagtggagaacccgg
gccattgcaacctccaatcttcggaccagagccaacaacatctacatctcatctgacgat
atcaaggaagatgatcacttcacttacatcatgccaaagaacattctgaaacgcttcatc
acgatcgccgatttgcgtgtccaagtagctggttatctgtacggttcctctccgccggac
aacgatcaagtgaaggagatccagtgcatagtgatggtcccacagattggtagcacacgc
gacgtccagcttccccagcagctaccacagcatgagtacctggagcatatggaacccctg
gggatcattcacaccgtctccggtaacgagccgccgtacatgaccgccatggacgtcacc
cagcatgctcgtctgatgaatgtacataaggaatgggatcggaagacgatcagcatgacc
gtgtccttcacgcccggttcggtgtcattggcttcttgggcgctgaccccgcaaggttat
acctggggttgtgagaataaggacatgggttccgatcaaccgcaaggattcagcacgtcc
atgggcgagaagtgtcaattacttttgagcgacaagatccgaggttatttcctggttcca
gagaacaactcgtggaactactcattcatgggatcaagcttcgcaggattggagaagaag
aatgtgcatgtcaaggtcgatacgccccttccgttctattcagaccagcatcgacccctc
cactttcagagcttcatggaattggaggatatctttgttgatcatgaggatccgtatgcc
tag
DBGET
integrated database retrieval system