Mollisia scopiformis: LY89DRAFT_779358
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Entry
LY89DRAFT_779358 CDS
T04865
Name
(RefSeq) pre-mRNA-processing ATP-dependent RNA helicase-like protein PRP5
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
psco
Mollisia scopiformis
Pathway
psco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LY89DRAFT_779358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psco03041
]
LY89DRAFT_779358
Enzymes [BR:
psco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LY89DRAFT_779358
Spliceosome [BR:
psco03041
]
Complex A
U2 snRNP components
U2 related factors
LY89DRAFT_779358
Complex B
LY89DRAFT_779358
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
Motif
Other DBs
NCBI-GeneID:
28832010
NCBI-ProteinID:
XP_018074970
JGI:
779358
UniProt:
A0A194XK79
LinkDB
All DBs
Position
Unknown
AA seq
1190 aa
AA seq
DB search
MARHRDSRSPSPAGSQHSSKRVKREDDGRRDRDWRDDPRGSRRRSRSRSVDRRHRERDAP
RRRDRSVDRREDDYYRSGRRDRSRDRRDRFDRERERSPDRRRRRSRDREYRDRRDDSYDR
APRRREDSTDSWSRSRGDGDTRKSSNKSDVAKPSETAKQSASAAQIEADKKAERLAKLEA
WKKKMAEDKERKEKELAAGGTRKLLEEIDQKANGSPSLGSPASPAAVASPQPYAGKFDPK
AIAKKAVANSSSANTLGTDLPLEELTKASATLPSSVKGLQADKKPTAFNSSSKVSALPKA
RGNLSAFGLGGKPAADPDKSTSKRTLDFGEDEGSRKKLEKLPTLPLAKTVDEDAALANGV
EEEDDGDVDMEDAGTEEEAAAAARAAAEKREERLQEEKKIAEDLVEAPQETNGDTKMKEQ
ATPQVEPTAMEEDDDIDPLDAFMDEMGDPFAAPKAKTFNKSKGKNLQQEPEPLFGDDDVD
LKALDADPDDILAMASKARKKKELPTINYAKLDLEPFRKNFYSEPAELADMSEAELADLR
LELDGIKVAGKSVPKPVQKWSQCGLNVQSLEVIRKLGYERPTAIQMQAIPSIMSGRDVIG
VAKTGSGKTIAFLLPMFRHIRDQRPLEGSDGPISLIMTPTRELATQIHKECKPFLKAMNL
RAVCAYGGAPIKDQIADLKRGAEIIVCTPGRMIDLLAANSGRVTNLRRVTYVVLDEADRM
FDMGFEPQVMKIFANIRPNRQTILFSATMPRIMDALAKKTLQDPVEITVGGRSIVAPEIT
QIVEVREEKDKFHRLLELLGELYDKDEDARTLIFVDRQEKADDLLKDLMRKGYPCMSIHG
GKDQIDRDSTIDDFKAGVVPIMIATSVAARGLDVKQLKLVVNFDAPNHLEDYVHRAGRTG
RAGNTGTAVTFVTEDQEQYSVGIAKALEQSGQPVPDRLNDMRKSFRDKVKTGKMKDSSGF
GGKGLERLDAEREAARMRERKTHKTDGDDEEEKEDKTGDDDIVLKAASTVQSATAAPSAP
LFGVPKGIDLDGKITVHRTETAAPGGSGSKNPLEKVTSAIDAINARLNKTGQLRSGVPID
NKGPDAGAFHATLEINDFPQKARWAVTNRTNVAKILEATGTSITTKGSFYPAGKDVQPGG
DPKLYILVEGDTEVVVTNAMRELMRLLKEGTMAAADAEGRAPASGRYNVV
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggctcggcacagggactctcgctcaccatcgccagcaggaagccagcactcgtcgaag
agggtaaagagagaggatgatggtagacgcgatcgggattggagagatgatccgcgtgga
tcacggaggcggagccgctctcgcagtgtggatcgccgccaccgcgaacgagatgcaccc
agacgcagagatagatcagtagaccggagggaggatgattactaccgctctggacgacga
gatcgatcgcgagaccgaagagacagatttgaccgagaacgcgaacgctctccagatagg
agacggcgcagaagtcgagaccgggaataccgtgataggcgagacgattcttatgacagg
gcaccaaggcgccgggaggactctactgactcgtggtcccgtagcagaggtgatggcgat
actcgaaaatcatcgaataaatctgatgttgcgaaacccagtgagacggcgaaacaaagt
gcttcggctgcacaaattgaggctgacaagaaggcggaacgtcttgctaagttggaagca
tggaagaagaaaatggctgaagataaggagcgtaaggagaaagaacttgctgcaggtgga
actcgcaagcttcttgaagaaatagatcaaaaagccaacggatccccatccttggggtct
ccagcatcaccagccgccgttgcctctccacagccatatgctggcaaattcgacccaaaa
gcaatagcaaagaaggcagttgccaattcatcatctgcgaatactctggggacggatttg
cctctggaagaattgactaaagcgtccgctaccttaccttcctcggtgaaaggattacaa
gctgacaaaaagccaacagctttcaacagctcgtccaaagtatctgcgttgcccaaagcc
agaggaaacctcagtgcattcggattaggtggaaaacctgcagcagaccctgacaaatct
acatctaaaaggacattggattttggcgaggatgaagggtcaaggaagaagttagagaag
ctaccgaccctaccattggcaaaaactgtagatgaggatgctgcgctcgctaacggtgtc
gaggaagaagatgacggcgatgtcgacatggaggatgctggcaccgaagaggaggctgcc
gctgcagctagagcagcagcagagaaacgagaagaacgacttcaagaagagaaaaagata
gccgaggaccttgtcgaagcgccgcaagagaccaatggcgacactaaaatgaaggaacaa
gcaacaccacaagttgaacctacagcaatggaggaggatgacgatattgatcccctggat
gccttcatggatgagatgggtgacccattcgctgctcccaaagccaagactttcaacaag
agtaagggcaagaatcttcagcaagaaccagagcctctatttggtgacgatgatgttgac
ctcaaagctcttgacgccgacccagatgacattcttgccatggcaagcaaggctcgaaag
aagaaggaattgccaacaatcaactacgcaaagttggatctggaaccgttccggaaaaat
ttctactcggagccggctgagctcgcggatatgagtgaagccgaacttgctgatctgcgc
ctcgagctagacggtatcaaagttgcgggcaagagtgttcccaaacctgtgcaaaaatgg
tcacagtgcggtctcaacgttcaatctttagaagtcattcgcaagcttggctatgagaga
ccgactgcgattcaaatgcaggcaatcccatcaataatgtctggcagagacgtcattggt
gtggccaaaactggttctggtaagacaattgcatttctgctccccatgtttcgtcacatt
cgcgaccagcgaccgttggaaggctcagatggtccaatcagcttgattatgactcctacg
cgtgagcttgcaacccaaattcacaaggaatgcaagcctttccttaaggcaatgaatcta
cgagctgtttgtgcctatggtggagctcccatcaaagatcagattgccgacctgaaaagg
ggtgccgagattattgtttgcacccctggccgtatgatagatcttctcgctgcaaattct
ggcagagtcaccaatcttcgtcgagttacatatgttgtactggacgaggcagatcgtatg
ttcgatatgggatttgagccccaagtcatgaagatcttcgccaatattcggccgaataga
caaaccattcttttctcggctacaatgcctcgaatcatggatgcactagccaagaagact
cttcaagatccagtcgagatcactgtcggtggcaggagtatagttgctccggagattact
caaattgtcgaggttcgtgaagagaaggacaagttccatcgtttgcttgaactcttggga
gagttgtacgacaaggatgaggatgctcgtactctgattttcgttgacagacaggaaaaa
gccgacgatttgttgaaggatctcatgcgcaaaggttatccttgcatgtctattcatggt
gggaaagatcaaattgatcgagactccactatcgatgatttcaaagccggtgtcgtgccg
atcatgattgccacttcagtggctgcccgtggtctggacgtcaagcagttgaagttagtt
gtcaatttcgatgcacctaaccacttggaagattatgtccacagagccggacggacaggt
cgggctggaaatacgggtacagcagtcacattcgttaccgaggatcaagagcaatattcc
gttggaattgccaaagcccttgaacagtcaggccagccagtacctgatcgactgaatgat
atgcgaaagtctttccgtgacaaggtcaagactggaaagatgaaggacagctctggcttc
ggcggtaaaggtcttgaacgactcgacgccgagcgagaggcggctagaatgagagaacgg
aaaacacacaaaactgatggagacgacgaagaagagaaggaagacaagaccggtgatgat
gatatcgttctcaaagctgcatctactgtacagtcggcgaccgcagctccttcagctcct
ctatttggcgtacctaagggcattgatcttgacggcaagatcaccgtgcaccgaaccgaa
accgcagcgccaggtgggagtggatctaagaatcctcttgaaaaggtcacatcagccatc
gatgctatcaatgctcgactcaacaagactggtcaattacgatcaggagtgccaattgat
aataaaggtcctgatgcaggcgctttccatgcaactttggagatcaacgacttccctcaa
aaagccagatgggccgtcacaaacagaacgaatgttgcaaagattttggaggctactggt
acatctatcaccaccaaaggaagcttctaccctgctgggaaagacgtgcaacctggtggt
gatccaaaactttatatcctcgtcgaaggcgacacggaagttgtggtcaccaatgccatg
cgggagttgatgagattattgaaggagggtactatggctgcagccgacgctgagggcaga
gctcctgccagcggtagatataatgttgtttag
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