Mollisia scopiformis: LY89DRAFT_782971
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Entry
LY89DRAFT_782971 CDS
T04865
Name
(RefSeq) beta and beta-prime subunits of DNA dependent RNA-polymerase
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
psco
Mollisia scopiformis
Pathway
psco03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LY89DRAFT_782971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psco03021
]
LY89DRAFT_782971
Enzymes [BR:
psco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LY89DRAFT_782971
Transcription machinery [BR:
psco03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
LY89DRAFT_782971
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Sec8_N
Motif
Other DBs
NCBI-GeneID:
28832358
NCBI-ProteinID:
XP_018070045
JGI:
782971
UniProt:
A0A194X684
LinkDB
All DBs
Position
Unknown
AA seq
1469 aa
AA seq
DB search
MQQFSTGGTEVKAQVVDKVPKRFKELKFGIQSIQDVSAQAVIEVSDRMLYDIEKMRRPTP
NGALDARLGISSKTGICETCGEGLHNCNGHFGHIRLALPAFHIGYLKLIMNILQNICKDC
ARVLLTETERRSYLKELRRPGIDNLKRTQICKKINEQCRKAKTCPYCDAVNGQIRKVAPL
KLVHDQYQAFNKSTAAKKVAPRSLVTFHNTFEEAKKNNAEIDKHLKKAMDDLNPLRVLNL
FKQITPSDCELLGINPAEGRPEMFIWQFVPAPPICIRPSVAQENASTEDDLTTKLAEIVH
VSSLIKAALQKGQPVATIVEQWDYLQLQIAMYVNSDVPGLQQPGSGKAIRGFCQRLKGKQ
GRFRGNLSGKRVDFSGRTVISPDPNLGIDEVAVPILVAKNLTYPERVQRHNIEKLRKCVL
NGPNVHPGAQQIMKKDSDHKISLKFAKRENEAKHLRIGDVVERHLEDGDIVLFNRQPSLH
KLSIMSHYVKVRPWRTFRLNECVCNPYNADFDGDEMNLHVPQTEEARTEAINLMGVKNNL
STPKNGEPIISATQDFITAAYLLSSKENFFDRKTFTNLCMYMVDGNTHLDLPPPAIFKPE
KLWTGKQVFSVLMRPNSKSPVKVNLDAKCRDYKPSPGMTPDMDPNDGWLVVRNSEVMCGR
MDKTTVGSGKKDSIFYIILRDFGPDEAVIAMNRLAKLSARYLTNQGFSIGISDVYPSAQL
NEKKQVLVTDAYKDCEVLIKKFKEGKLEKATGCNMEETLENAISGILSKVRQHAGEYCIE
TLSKWNAPLVMAKSGSKGSTLNVAQMIAVVGQQIIGGQRVPDGFQDRSLPHFPKNARQPP
SKGFVKNSFFTGLTPTEFLFHAISGREGLVDTAVKTAETGYMSRRLMKSLEDLSTQYDNT
VRNSSGIVVQFQFGADKLDPLNMEGSAVPVNFERTWIHAENLTWNNEDESLLPWEVTAEC
IELLKPEIARYGRKGLLGDTLEYDDTSNYGIDEHESARGFLQTITKFVAGLASRMAKARQ
RAGLNEFEDDPEISGDLRENSDEEPERKEQVERVAKVSKATLQMFIALCLNKYAKAHVEP
GHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQGVPRIKEIINASKVISTPVITCPL
MNKTNIPAARMVKGRIEKTYIHDVIRFIEDMWSAKSATICLSVDMDALNDMHLGITVEGI
AETICMNKKLKIKWGDVNVDQDCIFVNVTHESGGNMGARGAAAKNRLTLDEGGSDLLLRV
NHLKRALPSLAISGYPDATRAIIQTSEQGENTVHVEGYGLRACMTTEGVVGTECTTNSVM
ECRDVLGIEAARTTIAKEIAAVMGEMGIDPRHMQLLADVMTYKGEVLGITRFGLSKMRDS
VLQLASFEKTPDHLFDAAAGMKTDLIEGVSECIIMGQTMNVGTGAFKVVRKLGLKPEDTN
TKSTAFEDAWRWDQAERRKAARRAKTNGR
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaattttcgactggcgggacagaggtcaaggcgcaagtcgtcgacaaagtgccc
aagcgattcaaggagctgaaatttggcattcaatccattcaagatgtctccgcacaagct
gtcatcgaggtatcagataggatgctctacgatatcgagaagatgcgtcgtcctacgccg
aacggagccctagatgcaagattgggaatatcgagcaagactggaatatgcgagacatgt
ggcgaaggactccacaattgtaatggacatttcggacacatcagacttgctctgccggca
tttcacattgggtacttgaagttgatcatgaacattctgcagaacatctgcaaagattgt
gctcgagtgcttcttaccgaaaccgaacgccgaagctatcttaaggagctgaggagaccc
ggcatcgacaatctaaagcgtacccaaatctgtaagaagatcaacgagcaatgtcgcaag
gcaaagacatgtccctactgcgatgcggtcaacggtcagatccgaaaagtggcgcccctc
aagctcgttcacgaccagtaccaagctttcaataagtcgacagcggccaagaaggttgct
cctcgaagcctagtgacttttcacaacacctttgaggaggcgaagaagaataatgctgag
atcgacaagcatcttaagaaagcgatggacgatctcaatccacttcgagtgctgaatctt
tttaagcagatcaccccaagtgattgcgagttgcttggtatcaaccctgccgagggacgg
cctgaaatgtttatctggcaattcgttcctgcgcctccgatatgtattcgtccttccgtt
gcgcaagagaatgccagtacagaagacgatcttactacaaaattggctgagatcgttcac
gtcagctctcttattaaagcagctttgcagaaaggacagcctgtggcgacgattgtggag
caatgggattatctccagctgcaaatcgccatgtatgtgaatagcgatgtgccaggcttg
caacaaccagggtctgggaaggcaattcgaggcttttgtcagcgattgaagggtaaacag
ggtcgcttccgaggaaacttgtctggaaaacgtgttgacttctctggccgtactgtcatc
tcccccgatccgaatcttggaatcgacgaagttgccgtaccaattcttgtcgccaagaac
ctcacatatccggaacgtgttcagcgacataacatcgaaaagctgcggaaatgtgtactg
aatggacccaatgtgcatccaggagctcagcagattatgaagaaggactccgatcacaag
atctctctgaagttcgccaaaagagaaaatgaagccaagcatcttagaattggtgacgtg
gtggaaagacatctagaagatggtgatatcgtccttttcaatcgtcagccctctcttcac
aagctcagtattatgagccattatgtgaaggtcagaccgtggagaacattccgcctcaac
gagtgtgtatgcaatccttacaatgctgattttgatggagacgaaatgaacctgcacgtc
cctcagactgaggaagctaggacagaagctatcaacttgatgggtgtcaagaacaacctc
tcgaccccaaagaatggcgagccaatcatttcagcaacgcaagattttatcacagctgca
tatcttctgagcagcaaagagaatttctttgatagaaagacgttcacaaatctctgcatg
tatatggttgacggtaacacccatctcgacctcccaccgccggctattttcaagccagag
aaactttggactggcaagcaagtcttcagtgtccttatgcggccaaattcaaaatcacca
gtcaaagtcaatctcgatgccaagtgcagagactacaaaccaagtcctggcatgactcct
gacatggaccccaatgatggttggcttgtggtacgaaattcagaagtgatgtgtggaaga
atggacaaaaccactgtgggctctggcaagaaagattccatattctacatcattcttcga
gattttggacctgatgaagcagtcattgctatgaacagactcgccaagctatcagctcgt
tacctcacgaatcaaggattctccattggcatcagcgatgtgtacccgtcggcccagttg
aacgaaaaaaagcaggttttagtcacggatgcatacaaagactgtgaagtattgattaaa
aaattcaaagagggcaaattagagaaggccaccggatgcaacatggaagaaactctggag
aacgccatatccggtattctcagcaaggttcgacaacacgctggtgaatactgtatcgag
accttaagcaaatggaacgctcctttggtcatggctaagtcggggtccaaaggttccacg
ctcaacgttgcccagatgatagcagtcgtcggacagcaaatcattggaggccaacgtgtt
cctgacggcttccaagaccgcagtttgccgcatttccccaagaatgctcgtcaaccgcct
tccaagggtttcgttaagaatagtttcttcacaggattgacgcctactgagttcctattt
cacgccatctccggtcgtgagggtctggtcgacacagcagtcaaaactgccgaaactggt
tacatgagtagaaggttgatgaagtctcttgaagatttgtccacccagtatgataatact
gttcgcaattcttccggcatcgtcgtccaattccagtttggtgctgataagttggatccg
ctaaacatggaaggttctgcagtgcctgttaactttgagcgaacatggattcatgctgag
aatctaacttggaacaatgaggacgagtccctactgccatgggaagtcacagctgaatgt
atcgaacttctcaagcccgaaatagccagatacggtcgaaaaggcctattgggggacacg
ctagaatacgatgatacttcgaactacggcatcgacgagcatgagtcagctcgaggattt
cttcagacaattaccaaattcgttgcaggtctggcgtcacgtatggccaaagccagacag
agagcaggtctcaacgaattcgaagatgatccggagatttcgggcgatctccgtgaaaat
tccgatgaagaaccagaaaggaaggaacaagttgagcgtgtggctaaagtttcgaaggca
accctgcaaatgttcattgcactctgcttgaataaatacgccaaagcacacgttgagcct
ggacatgccgtgggtgccgtcggagcccagtccattggtgaaccagggacccagatgacc
ctgaagactttccattttgctggtgtcgccggtatgagtatcacccaaggtgtgccacga
atcaaggaaatcatcaacgcctccaaggtcatcagtacgcctgtaatcacatgcccatta
atgaacaaaacaaacattccggccgctcgtatggtcaaaggccgtatcgagaagacgtac
attcacgatgtcatacgatttattgaagacatgtggtcagccaaaagtgctactatatgc
ctctcggtcgatatggacgctctcaacgacatgcaccttggcatcactgtcgaaggtatt
gcggaaaccatttgtatgaacaagaagttgaagatcaagtggggtgatgttaacgttgac
caagactgtatctttgtcaatgttactcatgagagtggtgggaatatgggagcccgtggt
gcagctgccaagaacaggctaacacttgacgagggtggatctgatcttctgcttcgagtc
aaccacttgaagcgtgccttgccgtctctcgcaatatctggctacccagatgccactcga
gctatcattcagacttcggagcaaggtgagaatactgttcacgttgaaggctatggactt
cgagcatgcatgaccacagaaggcgtagttggcacagagtgcacgaccaacagcgtcatg
gaatgtcgcgacgtcctcggcatcgaagcagcacgaaccactattgcaaaggaaatcgcc
gccgtcatgggagaaatgggtatcgaccctcgacatatgcaactgcttgctgatgtcatg
acatataagggtgaagttctcggtatcactcgtttcggtctctccaagatgcgagacagc
gttctgcaactcgcctctttcgaaaagactccagatcatcttttcgatgccgctgctggc
atgaaaactgatcttattgaaggtgtcagtgaatgtatcatcatggggcagaccatgaac
gttggtactggtgcattcaaggtagttcgaaaacttggtctcaagccagaagacaccaac
acgaagtcaaccgctttcgaggatgcatggcgatgggatcaggccgagagaagaaaggca
gctaggcgggctaagactaacggtcgctag
DBGET
integrated database retrieval system
