Mollisia scopiformis: LY89DRAFT_783548
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Entry
LY89DRAFT_783548 CDS
T04865
Name
(RefSeq) nucleoporin-like protein
KO
K14311
nuclear pore complex protein Nup188
Organism
psco
Mollisia scopiformis
Pathway
psco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
LY89DRAFT_783548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psco03019
]
LY89DRAFT_783548
Messenger RNA biogenesis [BR:
psco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
LY89DRAFT_783548
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_C
Nup188_N-subdom_III
Nup188_SH3-like
Nup188_N
PelG
Motif
Other DBs
NCBI-GeneID:
28832419
NCBI-ProteinID:
XP_018069745
JGI:
783548
UniProt:
A0A194X5E0
LinkDB
All DBs
Position
Unknown
AA seq
1856 aa
AA seq
DB search
MAPLRDASYFPSLDKCLTGEELLISWKSAFAAITSEFELDDEHQDAIQEFLQDSEVLHLL
ANPFEAFLEPSPQTKSTFETKTSAINVTPSSNAKYDIKQIKEDTLWLSRVARLDEVSALR
VVVGECQSRAAAQLLGPFSEEELVGIREAAGNSRYSSPIPLSLLSGAVEPTTIQKNFDKE
GSRRSRILRTYLSERRHFFKCTERLLHAAYRRVDAGRQENKGKQPEKGAPWLAKAGDTLY
SKIAKGSEPKLIIKAIATIESNVKSIENGSGWSDECEGGDELEMDWLQTKIIETIHIMEL
IWTLMIYVVDCPSSDIILAWFHLQQACKFFSTFEMEHPNIQGILFAFQSTSMLVSLIMIS
LTPCIEFLQDSHNHEGVSPDAPTDEMYIFNTTTIMEIHSIVLEAADNGFPTAGPATLAWA
YVVSAMQERVQADNTPEPSRFDRATSVDTELTMAPDCYRDTLDQIVATVDSDIVEFLGIR
AVNTCRVFETLTSLSLQLGTTTAALFPYTTGSQMRTLILDLLKYALGLGYLPELMQAVIS
TLTGGRDYWTISSSKPLLQVDDPMVHFLSDTDLVNATVMNAQQRYPYESLPFLQMVRALA
ASPATFGTEPSQSVLALLEAMPVFTYTLPPHFADYETAQEEDNNNTIRLTQPVQLFEPRS
KSSRLQSMQIKSWAVTRLDQDFCIPAGAYGRIISEAGPRVAFWFHEYPALKYFGKLLETF
LAAGDVIDATAGGPADRDSVCEIINIIATLLLSTFQSAEANNNWKEDARRVLEQSSAGLS
RNRDITSVIFDIFEQELQNISSSSGSETSLEILVNCISFIHAMLPVFPGRVWPLLARSGL
LGVTRGSGQLSVIVEGVELVSGRYGFLTSCCRLYEALVDDFATNAILRRGGGRSSARFQE
GDDVGTGIPDHTLSKVLFVFTRYLVDVFESSCTWRYQDQDDRQRVSLVIGAALNQVLQYA
YGIESWADDDKSDQKTFKPKSVLTAGAVKKQKVTRIMDPLLPSASHIVETFLSSSSGALR
FQPLLRSYFDGLATPDSTVFVHSTNLRISHITTLLSFSTTLLRVSKLLNRPSSQLEKHLF
KASPLIARLYAANDFYRNPVVALFEALIVTAASGNSEPPSILGHLGGLTARNFLHMLTDL
DQPLSRGHNIITIWHFLSMVVSSRQQWFANYLLTGKTPRDAMKSGTTGKEVASLEKPLLT
TALEKLSKIDEIPQAQSLVMLEFVSRAQSFWPWTVCNTPMYAAFIKNISEFAGRLRPIQS
SSKTEEYYEPCYQTRIASHIAEILAMHLFHSRQIGAASPLKDLKENLSFFSRFAVGVPNF
NASLHASLKKNLEARFPGCTLQDLKRTTLEPPQIGKNFFYDLTLANKLLQHDSAWTGRQD
GGLQMEVERANLNLSLVDAQIALFHSWKFLAIELSVNMKGDADLERMCAEVVNSCLLANC
AYEHPEEVFARLSLIRTDFALVLAQRLIQAETSIEEVKNLLSVVWKTITKLRGSFERAVP
DGDILYYRSLLKVLFLAVRVHAEAKSEVKENDLRASLRINQSAPIIPIILDIIKHVVSMG
LRELASAVHDSPADSSPEDLSLLTGILQSCLRIPGIELYHTQIVNIVSSNSTPRVALTLF
SWSDKIAIDGDPIYGELSMLFLVELSSIPLMAEQLAIDGILGHIASASITSYLRRGGVGP
FADSAGLQRCYSIWVRGILPLLLNIIDAVQASVTTEVALFLEQFPTLLAQSEQALDAPET
SRIVPKGQTKYITLTICSELHSMALLTFVLNGFREVLKGTTEVPDVKWDAAGVLENAEFW
LTSRALLRERILPMGEREVAMVKKKNAEGRAVSALENKVVIELMGIRDVLSSGNDS
NT seq
5571 nt
NT seq
+upstream
nt +downstream
nt
atggctcccttacgcgatgccagttatttcccctccctggacaaatgtttgacaggcgag
gaattattgatctcatggaaatcggcctttgctgcaatcacaagtgaatttgagctggac
gacgaacaccaagatgcgatccaagagttcctacaagattccgaagtcctacatctgctc
gcaaacccttttgaagcctttttggagccatcaccgcaaacaaagagcacattcgagacg
aaaacttctgccatcaatgtcactccctcttccaacgcgaaatacgacatcaagcagatc
aaggaggatacactgtggctgagcagagttgctagactggacgaagtgtcggcgcttagg
gttgtagtgggggagtgccagtctcgcgcagccgctcaactattgggtcctttttctgag
gaggagcttgtcggcattcgagaagcagctggcaatagcagatattctagcccgattcca
ctttcactcctctctggagccgttgagccgaccacgattcagaagaacttcgacaaggaa
ggcagtcgacgatcacgtatacttcgaacgtacctctcagaaagaagacacttcttcaag
tgcaccgaacgactccttcacgctgcttaccgcagagtggatgctggtagacaagaaaat
aagggcaaacaaccagaaaaaggagcgccttggttggcaaaggctggggatactctttac
agcaaaatcgcaaaaggcagtgagcccaaactcattataaaggccatcgcgaccatcgaa
agcaatgtcaaaagcatcgaaaatggcagcggctggtctgatgaatgtgaaggcggagat
gaacttgagatggactggttacagaccaagatcatcgagacaattcacataatggaactc
atctggacccttatgatatacgtcgtggattgtccttcgtccgatataattctggcttgg
ttccaccttcagcaggcttgcaaattcttcagcactttcgaaatggaacacccgaatatt
cagggaatcttgttcgcattccaatctacatcaatgcttgtatcattgattatgatcagt
ttaactccctgcattgagttcttacaagattcgcataatcatgaaggagtttcacctgat
gctccgaccgatgagatgtacatcttcaatactacaactatcatggagattcacagcatc
gtgcttgaagctgcagataatggcttcccaactgcaggtcctgctacacttgcttgggct
tatgtagtgagtgctatgcaagaacgtgtacaggctgacaacacaccggagccctctcgt
tttgatcgcgcgacctcggtcgatacagagcttaccatggcccctgattgctacagagac
acccttgaccagattgttgccactgtcgacagtgacattgtcgaattccttggcattcga
gctgtcaatacctgtcgcgtcttcgagacactcaccagtttatccctccaactgggaacc
acaacggctgcgctgttcccatatacgacggggtctcaaatgcgtacgcttattttggat
cttctcaagtatgctctggggcttggataccttcctgaacttatgcaagctgtcatttca
acgcttacaggcggccgagactactggacgatttcatcctcaaagcccctccttcaagtc
gacgaccccatggtgcactttttaagtgatacagatcttgttaacgcaactgttatgaat
gctcaacaacggtacccatatgaatcactgccattcctgcaaatggttcgagcgctggct
gcatcgcctgctacatttggaaccgagccttcacaatctgttctcgcacttctcgaggct
atgccagtctttacttacacgctaccaccccatttcgcagattatgagaccgcgcaagaa
gaggataacaacaacaccatcagattgactcagcctgtccaactctttgagcctcggtcc
aaatcttctcgccttcagagtatgcagattaaatcgtgggctgtcaccagacttgaccaa
gatttctgcattccagctggtgcttatggtcgtatcatatctgaagccggcccgagggtc
gctttctggtttcacgaatacccagccttgaagtactttggcaagcttctcgagacattc
ttggcagcaggcgatgtgattgatgcaactgcgggtgggcctgcagaccgcgattctgtc
tgcgagattatcaacatcattgcaactctccttcttagcacgttccaatccgctgaggcc
aataacaactggaaagaagatgcacgacgcgtcttggagcagtccagtgccggtctcagc
cgcaaccgggacatcacatctgtgatattcgatatatttgagcaagaacttcagaatata
tcatcctcatccgggtctgagacatctctggagatacttgtcaattgcatctccttcatc
catgccatgttacccgtgttccctggacgagtctggcctctcctcgcacgaagtggtctt
ttaggtgttactagaggaagtggacagctatctgtaatcgtggaaggtgtggaacttgta
tcaggccggtatggatttctgacttcatgctgtcgactgtacgaggcacttgtcgacgat
ttcgcaaccaatgcaattctcagacggggtggcggtcgatcatctgcaagatttcaagaa
ggggatgatgtaggcactggcatccctgaccacaccctctcgaaagtgcttttcgtattc
acaagatatctcgtggacgttttcgagagctcttgtacctggagataccaagaccaggat
gatcgtcaaagagtcagccttgtcattggtgctgcgctgaatcaagttctgcaatatgca
tacggcatcgaatcctgggcagacgacgacaaatctgaccagaagactttcaagcctaaa
agtgttcttacggcgggtgctgtcaaaaagcagaaagttacgcgaattatggacccactc
ctaccatcagcatcacatattgtggagacctttttatcaagctcttccggtgcactgaga
tttcagcctcttttgcgatcttactttgatggtctagcaacccctgactcgactgtcttc
gtccattccacgaacttgcgcatatcacatattacaacacttctctcattctcaactaca
ctacttcgagtgagcaagttactgaaccggccatcttctcagctcgaaaagcatcttttc
aaagcctcgccgttaatagctcgtctttatgccgcaaacgacttttatcgaaatcccgtg
gtggctcttttcgaggctctcattgtcacagctgcctctggcaattcagaacctccttct
atattaggccatctaggaggtttgacggctagaaatttccttcacatgctaacagatctc
gatcaaccactatccagaggacataacattatcactatatggcatttcttgtctatggta
gtgagtagtcgtcaacagtggtttgcaaattatctccttactggcaaaacaccaagagat
gcaatgaagagtgggaccactggcaaggaggtggcatcgttggagaaacctctgttgacc
acggcacttgagaagctatcgaagatcgacgagattccacaagcgcaatctttggtgatg
ctggaattcgtttcgcgtgcccaaagcttttggccttggacagtctgcaatacccctatg
tacgctgcattcatcaagaacatatcggaattcgcaggcaggctcaggcccatacaatct
tcgtcaaagacagaggaatattatgaaccttgctaccaaactcgcattgcaagccacata
gcagagattttggccatgcacctgttccattcgagacaaatcggagctgcatcaccactg
aaggacctgaaagagaacttatccttcttctcaagattcgccgttggtgtccctaatttc
aatgcgtcacttcatgcttcattgaaaaaaaatctggaagctcgattcccaggttgcaca
ctccaagacctgaagcgtacgaccctggagcctcctcaaattgggaaaaatttcttttac
gatctaacacttgctaataaattactccaacacgactccgcttggactggacgacaagat
gggggtcttcaaatggaagttgaacgtgcgaacctcaacttgtcacttgttgacgcacaa
atagctttgtttcacagctggaaatttctcgctatagagctaagtgtcaatatgaaaggc
gatgccgatcttgaaagaatgtgtgccgaggtggttaatagttgcctcctagccaattgt
gcatatgaacaccctgaagaggttttcgctcgtctgtctctgatacgtacggattttgct
cttgtgcttgctcaacgcttgattcaagccgaaacgtcgattgaagaggtgaaaaattta
ctgtctgttgtctggaagactatcaccaaactccgcggttctttcgagcgagctgtcccc
gacggcgacatactctactacagatctttactgaaggtcttatttcttgcagttcgggtg
catgccgaagccaaatcagaagtaaaggagaatgatctgcgagcatctttgcgtatcaac
caatccgctcccatcattccaattatcctcgatatcatcaaacatgtcgtatcgatgggt
ctccgtgaattggcttcagctgttcatgactctccagcggattcatcaccagaagatcta
tctctgttgactggcatcttgcaatcatgtctccgcatcccaggtattgagctgtaccac
acacaaatcgtcaacatcgtgtcgagcaattccactccccgtgttgctctgacgctcttt
tcgtggtcagataaaattgcaatcgatggtgaccccatttacggcgagctgagcatgctc
ttcctggtcgagttgtccagcatccctctcatggccgaacaacttgcaatcgatggtatc
ctcggtcacattgcgtctgcaagtattacgtcctatctccgtcgaggcggtgtgggcccc
tttgcagacagtgctggacttcagcgctgctatagcatctgggtacgcggcatcctacct
ctcttactcaatattatcgatgcggtgcaagcttctgtgactacagaagtagcgttattc
ctggaacagttcccaaccttactagctcaatctgagcaagctttggacgcgccagaaacg
agtcgcatcgtgcccaaaggacagacgaaatacatcacacttaccatctgctcagaacta
cactcgatggcgctgttgacattcgtcctgaatggtttcagggaagttctgaaaggtaca
acggaagtcccggacgtcaagtgggatgcagcaggtgtactagagaatgctgaattttgg
ttaacttcacgggcattactccgagagcgaatattaccaatgggcgaaagagaggtggcc
atggtcaaaaagaagaatgcggaaggccgagcagtgagcgcattggagaataaggttgta
attgagttgatgggcatcagggatgtgctgagcagcgggaacgattcgtga
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integrated database retrieval system
