Mollisia scopiformis: LY89DRAFT_787014
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Entry
LY89DRAFT_787014 CDS
T04865
Name
(RefSeq) uncharacterized protein
KO
K18725
nucleoporin POM152
Organism
psco
Mollisia scopiformis
Pathway
psco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
LY89DRAFT_787014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psco03019
]
LY89DRAFT_787014
Messenger RNA biogenesis [BR:
psco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
LY89DRAFT_787014
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig-like_POM152
Ig_Pom152
Ig-like_Pom152_9
Ig-like_Pom152_1
TMD_POM152
Motif
Other DBs
NCBI-GeneID:
28832761
NCBI-ProteinID:
XP_018064954
JGI:
787014
UniProt:
A0A194WSC6
LinkDB
All DBs
Position
Unknown
AA seq
1247 aa
AA seq
DB search
MSSTPQMRSSWPSTPGSNQPTPDSTRVRSPLPEIPNAAPAAAATNAPLIPVNLIDAPSQR
MYTLAVYGLLLVWRLYDWWKLVEDDTNSFALFFKWTLIDILFLFGIPLLRIPWLEWSEST
SLVACSLHTVVNGMLMFRIPLPLEGTLLFFAKTIFDREMSISENSVRPSTILHNSSLIMG
KQIINILPEGSVTMNPEGQPFCVDSSHPVAHIPLYFNQTKPKHVELLRIDFDTNANETIV
LSQKEVNNAKKTQDDNLYTINYTAKKPGLYRLLKVVDKTKLEVQRRMSDTLVVTCPRAVV
KSSSSDKCLGDLSDLTMEIEGTPPLKVVYSRTANSDQSVHHFQSIQPENFASPLLGSTNA
GTLVLAGSQDVSWARTHRITVPLNESMMPSGRWLYSIDEIHDATGNIANFTIGGDDGEHV
YPKGAHLEQAFVVHERPFARLKGCDSRNPLMVANGQAIQFPVQYSSPGRAPDDTSHTLMW
KFSPLESLTKNGDHGEETVFQEFSARAAHNTPVIRQPGLYTLTGVKSKFCDGEIKEPASC
LLLNPPEPELTLSSENINDKCAGNSIGLLVDLDLIGTPPFTVRYDVITKAGKHPEDVKVS
GLRHQLALKPTDAGHFKYQFTSIDDAVYKGHQLSGSGLVLEQDVKPPASARLRVPSGSID
ACIEEPVEMNVELSGEKPFTLEYELVHDGKRKKNKISSIGTDVYKISTDPLIKGGEYSLA
LTSVQDKTGCKIFLTSEAKFTVRRQRPKASFGLLEGKHKTVEVEGGNVELPLRLTGRSPW
TLKYRNLNDKSGKILEKRARSTNDILAVSERGIYEILEVLDEQCPGTVDTTASTFEVDWF
LRPQIKVADTAALIPDGKKYRKREVCEGDIDAVEVSLIGSSPYNVRYRVSHKPEHGTSSI
SNKEFEAALGVATISMDTSKPGTYEYKFSELSDALYDHDSKKFTPLVLEQKVNRKPSAHF
IKPGQSYKYCKEELAGDEVIPIKLEGVPPFSLEVDIKHQSNIRPETVKIANIESNHYDFR
IPHRVLSLGIHQVSVRKVRDSHGCQQKTEYGGPHVQVQVYDVPTIYPLDSRVDYCVGERI
SYTLSGTAPFEIFYNFEGVQRKAKSTSTTFRRIAEKPGNFTITGVSDKASECKARTNISK
LVHEMPSVKISKGRQVEVDIHEGGEAEILFEFWGTPPFEFTYTRSTNARRGQKSQVLETR
HEVSYEHSKTIQSSQEGTYEVVAIKDKYCSFSTQKAESGNKQRLLQF
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaacccctcaaatgcggtcgtcgtggccatcgactccgggcagcaatcagcca
actccagactcgacgagggtgagatcgcctctaccagagataccaaatgccgctccagca
gctgctgcaacaaatgcgcctctcatacctgtcaatctcatcgatgccccgagccagcgg
atgtacactttagcagtctatggattgcttctggtgtggcgtctatacgattggtggaaa
cttgtggaagatgacaccaattcatttgccctgttctttaagtggacgctcatagatatc
ctattcttgtttggaatccctctactacgaataccatggctcgaatggtcggaatcaaca
tcacttgtggcatgctctttgcatacagtagtgaatggcatgctgatgtttcggataccg
cttccattggaagggacattattgttttttgccaaaactattttcgatcgagagatgtcg
atttccgagaatagtgttcggccatcaacgattttacataattcgtccctcattatggga
aagcaaatcatcaatatcttgcctgaaggatctgttactatgaacccagagggccagcca
ttctgcgtcgacagcagtcatcctgtggctcacatacctctatacttcaaccagaccaag
ccgaaacatgtcgaacttctccgtatagactttgatacgaatgccaatgagacaattgta
ctgtcacagaaggaggtcaacaatgccaaaaagacccaggacgacaatttgtacactatt
aattacaccgctaagaagcccgggctttataggttgcttaaggttgtcgataagacaaag
ctagaggtccagagaaggatgtcagatacattggttgtcacatgtccgagggctgttgtc
aagtcttcatcttcagacaaatgcttaggtgatctttcggatctcaccatggagatcgag
ggcactccacctctgaaagtggtttacagccgaaccgcgaacagcgaccagagcgttcat
cattttcagagcatccaaccagagaattttgcttcgcctctgttaggatcaaccaacgca
ggtaccttggtcttagcaggcagtcaagacgtctcatgggcgcggacccatcgcattacc
gttcctcttaacgagtcgatgatgcctagcggccgatggctatactctatcgatgagata
cacgatgccactggtaacatagctaatttcaccattgggggcgatgacggagagcatgtc
taccccaaaggtgcacatctggaacaggcgttcgtcgttcatgagcgaccttttgctcgc
ctcaaaggatgtgattctcgcaacccactgatggtcgcaaatgggcaagctatccagttc
cctgttcagtattcgtcacccggccgtgcacctgatgacacttcccacaccttgatgtgg
aaattttctcccttagaaagcttaacaaagaatggagaccatggagaagaaacagtgttc
caggaattctcagcaagggcggctcacaacacgccggtcattcgccagcccgggctttac
acgctgactggggtgaagagcaaattctgtgacggagagatcaaggagccagcgtcctgt
ctactgctaaatccgcctgagccagaactgacattaagttccgagaatatcaacgacaaa
tgcgcagggaattccattggcttacttgttgatctcgacctaatcggtacacctccattc
actgtgagatatgatgttatcaccaaggctggaaagcatccggaggatgtcaaagtatct
ggactgcgtcaccaattggctctcaagccgactgacgcaggccacttcaagtatcaattc
acctccatcgatgacgccgtttataaaggccatcagctaagcgggagtggacttgtcctg
gagcaagacgtgaaaccacctgcctctgcacgcctacgtgttccttctggtagcatcgat
gcatgtatcgaggagccggttgagatgaatgtagaactatctggagaaaagccatttacc
ttggaatatgagcttgttcatgacggtaaacggaagaagaataagatctcgagcattggc
acagatgtctacaaaatcagcaccgacccgttgatcaaaggcggcgagtattcccttgct
ctgacgagtgtccaggacaagaccgggtgcaagatcttcctaaccagcgaggccaaattt
actgtcaggcgacaaagaccgaaggcatctttcggattactggagggaaagcataagaca
gtcgaggttgagggtgggaatgtcgaactaccattacgtctgactggccgttctccttgg
acactgaagtatcgtaatcttaacgataaatcggggaagatattggagaaaagagccaga
tcaacaaatgacatacttgccgtatccgaaagaggtatatacgagatcctggaagtctta
gatgagcaatgcccaggaactgttgatactactgcctctacattcgaggttgactggttc
ctccgaccccaaatcaaggttgcagatacggcggcccttattccagatggcaagaagtat
cgcaagagagaagtgtgcgagggcgacatcgatgcagtagaggtcagcctcattggttct
tcgccctacaacgttagatatcgggtcagtcacaaaccagagcacggaacaagctctatc
agcaacaaagagttcgaagctgcccttggtgtggctaccatttccatggatactagtaaa
cctggaacctacgagtacaagttctcggaactttctgatgctctgtacgaccacgattcc
aagaagttcacccctcttgtactggagcaaaaagtcaaccggaaaccatctgcccacttc
atcaaaccaggccaatcttacaaatactgtaaagaggagctggcaggtgacgaagttatc
ccgatcaagttggaaggagttcctccctttagtctcgaagtagacatcaaacatcagagc
aatattcgaccggagaccgtgaagatagccaatatcgagtctaatcattatgacttccgg
attccacatcgcgtcctctccctgggtatccatcaagtcagcgtgcggaaggtccgcgat
tcccacggatgtcaacagaaaacagaatatggaggacctcatgtccaggttcaggtctat
gatgtccctacgatctatcctttggattctcgagttgattattgtgtgggtgagcgaata
tcctatactctatctggcacagcaccgtttgagatcttctacaacttcgagggtgttcaa
agaaaggcgaagtccacaagcaccactttccggcgcatcgcagagaagcctggcaatttc
accatcactggcgtttccgataaggcgagcgagtgcaaagcgaggacgaatatatccaag
ctagtccacgaaatgccaagcgttaagattagcaaaggcagacaagtagaagtggatatc
cacgaaggaggagaagctgaaattctgttcgaattctggggcacgcctccatttgaattt
acgtacacgagaagtacgaatgctcgaagaggtcagaagtcacaggtcttagagacgaga
catgaggtctcttatgagcacagcaagactattcagtcgtcacaggaaggcacatatgag
gtggtggctattaaggacaagtactgttcgttctctacgcagaaagcagagtctgggaac
aagcagcgtctgcttcaattctag
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