Mollisia scopiformis: LY89DRAFT_787089
Help
Entry
LY89DRAFT_787089 CDS
T04865
Name
(RefSeq) DNA mismatch repair protein msh-2
KO
K08735
DNA mismatch repair protein MSH2
Organism
psco
Mollisia scopiformis
Pathway
psco03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LY89DRAFT_787089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psco03400
]
LY89DRAFT_787089
DNA repair and recombination proteins [BR:
psco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LY89DRAFT_787089
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
ARMET_C
RHG29_45_N
Motif
Other DBs
NCBI-GeneID:
28832766
NCBI-ProteinID:
XP_018065043
JGI:
787089
UniProt:
A0A194WRR8
LinkDB
All DBs
Position
Unknown
AA seq
916 aa
AA seq
DB search
MSSRPELKVDDEGGFISFFKSLPDSDDGAIRVFDRGDWYTAHGDDASFIARTVYKTTSVL
RQLGRNDSTGLPSVTMTITVYKNFLREALFHLNKRIEVWASSGKMNWKIIKQASPGNLQD
IEDELGGQFEAAPIILAVKVSAKASEARNVGVCFADASVRELGVSEFLDNDLYSNFESLL
IQLGVKECLIQVDKSGKDIELKKLKDIIDSCGVAFCERQIGDFATKDIDQDLARLLKDEK
AAGTLPQTDLKLAMGSAAALIKYLGVMHDSSNFGQYQLYQHDLSQFMKLDASALKALNLM
PGPRDGAKTMSLFGLLNHCKTPVGSRLLAQWLKQPLMSKDEIEKRHQLVEAFVEDTELRQ
TMQEENLRAIPDLYRLAKRFQRKMGNLEDVVRAWQVVVKLPDFINTLEGVMDEQYRDPLD
EAYTSKIRECSDSLEKLREMVETTVDLEAAQNHEYIIKPEFDEGLKIIRKKLDKLRHEMD
QEHRAASQDLGQEMDKKLFLENHKVHGWCMRLTRTESGCIRNNKKYQECGTQKNGVYFTT
QKLVSIRRDFDQLSENYNRTQSSLVNEVVSVAASYCPVVEQLAGILAHLDVIVSFAHCSV
HAPTSYVRPKMHPRGEGDTILKEARHPCMEMQDDIQFITNDVSLKRGSSEFLIITGPNMG
GKSTYIRQIGVIALMAQVGCFVPCSEAELTIFDCILARVGASDSQLKGVSTFMAEMLETA
NILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGCFSMFATHFHELTALVDQ
YPQVQNLHVVAHIDDNGKAKREVTLLYKVEEGVCDQSFGIHVAELVRFPEKVVNMAKRKA
DELEDFTSKHEGEAISYKKEDVEEGSALLKEVLLKWKEECEGKDLSKDEMVSKMRELVKG
DEKLLANPFFQSVKAL
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcccgtccggaattaaaggtcgacgacgaaggaggctttattagttttttcaaa
tctctaccagactcagacgatggggctattagagtctttgaccgtggtgattggtataca
gcgcatggtgacgatgcttcatttattgctagaacagtttacaagacaacatctgtccta
cgacaattgggcaggaatgattctaccggccttccctccgtcacgatgaccattaccgta
tacaagaacttcctccgagaagctcttttccacctgaacaaacgaattgaggtctgggcc
agctcgggaaaaatgaactggaagatcataaagcaggcatcaccaggaaatctgcaagat
atcgaagacgagctcggtggccagtttgaagcagctcctattatcttggctgtcaaagtc
tcagcaaaggcttcggaagccagaaatgttggagtgtgctttgcggacgccagcgtcagg
gaacttggcgtctcagaattcttggacaacgacttatactcgaatttcgaatcacttctc
atccagctgggcgtgaaggagtgcttaatccaggtggacaagtcgggaaaagatattgag
ctaaagaaactcaaggacatcattgacagttgtggagttgcgttttgcgagaggcaaata
ggcgacttcgccactaaagacatcgaccaggatcttgccagactcttgaaggatgagaag
gctgcaggaaccttgcctcaaactgatctaaagcttgcaatgggttctgcagctgcactg
atcaagtaccttggagttatgcacgattcttcgaattttggtcaatatcagctgtatcaa
cacgacttatcgcaattcatgaagcttgatgcatccgcactcaaagccttaaacttgatg
ccaggacctagagatggtgcaaagaccatgtctctttttggactcctcaaccactgcaaa
actcctgttggtagccgactgttagcacagtggcttaagcaaccactcatgagcaaggat
gagattgagaagagacaccaattagtggaggcattcgttgaagataccgaattacggcag
acgatgcaagaagaaaatttgagggcgattcccgatctgtatcgtctagcgaagaggttt
caacgaaaaatggggaatcttgaagatgtagtcagagcatggcaggttgtggtcaagcta
cctgacttcattaacacacttgaaggcgtgatggatgagcagtatcgagaccctctggac
gaagcatacacatcaaagattagagagtgttcggatagtcttgagaagctacgagaaatg
gtggagaccactgtcgacttggaagctgcccagaaccatgagtacatcattaagcccgaa
ttcgacgagggattgaaaatcatccgaaagaagcttgataaattgaggcacgaaatggat
caagaacacagagcagctagccaggacctgggtcaagaaatggacaagaaactgtttctc
gaaaaccacaaggtccacggatggtgcatgcgacttaccaggacagagtcaggatgtatt
cggaacaacaagaagtatcaggaatgtggtacgcaaaagaatggtgtctatttcacaaca
cagaagttggtcagcattcgcagagactttgaccagctgtctgagaactacaaccgaaca
cagagtagcttggtcaacgaagtcgtaagcgtggctgcttcgtattgcccggtcgtcgaa
cagctggccggcattttagcgcatctggacgtcattgtcagctttgctcattgctcagtc
catgcacctacctcgtacgttcggcccaagatgcaccctcgtggtgagggtgatacaatc
ttgaaagaagctcgacatccatgtatggagatgcaagacgatatacaatttatcaccaac
gatgtcagcctgaaaagaggatcttctgagttcttgatcattactggtcccaacatgggt
ggtaaatccacttacattcgccagattggtgtcatcgctttgatggcccaagttggctgc
ttcgtcccttgctcagaggcagaactcacgatcttcgactgcattcttgctcgtgttggt
gccagcgattctcaactcaagggtgtgtcaaccttcatggctgaaatgctcgaaacggcc
aacattctcaagtctgcaacctcggaatcactcatcatcattgacgaactcggtcgtggt
actagcacttacgatggattcggtctagcatgggctatttctgagcacatcgtgaaggag
attggctgcttctccatgttcgctacccatttccacgagctgactgctttggtggaccaa
tatccacaggtccaaaatctgcacgtcgtggcacatattgacgataacggcaaagcaaag
agagaagtaacactactttacaaagttgaagaaggcgtttgtgaccagagttttggcatt
cacgtcgcggagttggtacgcttcccagagaaggttgtcaatatggccaagaggaaagca
gatgagctggaagacttcacaagcaagcatgaaggcgaagcaatttcgtacaaaaaggag
gacgttgaagaaggaagtgctttgctcaaagaagtcttgctcaaatggaaggaagagtgt
gaaggcaaggacttgagtaaggacgagatggtcagtaagatgagagagctggtgaagggt
gatgagaagctgttggccaatccgttcttccagagtgtcaaagctttgtaa
DBGET
integrated database retrieval system
