Mollisia scopiformis: LY89DRAFT_788408
Help
Entry
LY89DRAFT_788408 CDS
T04865
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K10756
replication factor C subunit 3/5
Organism
psco
Mollisia scopiformis
Pathway
psco03030
DNA replication
psco03410
Base excision repair
psco03420
Nucleotide excision repair
psco03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LY89DRAFT_788408
03410 Base excision repair
LY89DRAFT_788408
03420 Nucleotide excision repair
LY89DRAFT_788408
03430 Mismatch repair
LY89DRAFT_788408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psco03032
]
LY89DRAFT_788408
03036 Chromosome and associated proteins [BR:
psco03036
]
LY89DRAFT_788408
03400 DNA repair and recombination proteins [BR:
psco03400
]
LY89DRAFT_788408
DNA replication proteins [BR:
psco03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
LY89DRAFT_788408
DNA Replication Termination Factors
ELG1-RFC complex
LY89DRAFT_788408
Chromosome and associated proteins [BR:
psco03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
LY89DRAFT_788408
DNA repair and recombination proteins [BR:
psco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
LY89DRAFT_788408
Check point factors
HRAD17(Rad24)-RFC complex
LY89DRAFT_788408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_assoc_2
AAA_30
RCF1-5-like_lid
AAA_22
AAA_16
AAA_24
AAA_19
AAA_11
AAA_5
RuvB_N
DUF815
AAA_3
ResIII
SLFN-g3_helicase
DEAD
AAA_14
PhoH
RNA_helicase
AAA_28
AAA_18
Mg_chelatase
AAA_7
bpMoxR
ATPase_2
AAA_25
nSTAND3
DNAX_ATPase_lid
TK
SRP54
TIP49_C
IstB_IS21
TniB
ABC_tran
PIF1
Motif
Other DBs
NCBI-GeneID:
28832890
NCBI-ProteinID:
XP_018063337
JGI:
788408
UniProt:
A0A132B999
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MSDYEDDMDVDAPVGRDTITFSSDNTNSKGKRSAANLPVEAEDTLPWVEKYRPDTLEDVS
GHQDILATINKFVDTNRLPHLLLYGPPGTGKTSTILALARRIYGAKNVRQMVLELNASDD
RGIDVVREQIKTFASTKQIFTMNPTSNSSTSIAAYKLIILDEADAMTSTAQMALRRIMEK
YTANTRFCIIANYTHKLSPALLSRCTRFRFSPLKEVDIRVLVDKVIDEENVQITSDATDA
LVKLSKGDMRRALNVLQACHASSTPLHLKGTPKIAEKDIKRDLITETTIYECIASPHPED
ITKIADTLMHTTDVTSCLQTINSLKSTQGLALADIITALSEQLTAMRVPAPVMITWLDGL
AEVEYRLSGGGGEAIQTGAVVGVVRNGAELFETLK
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactacgaagatgatatggacgtggacgcgcctgtcgggcgcgacacgataacc
ttcagttctgataataccaattcgaagggcaagagaagcgcggcaaacttgcccgttgaa
gcagaggatacactgccatgggtcgagaaataccgtccagataccctcgaagacgtctcg
ggtcatcaagatatcctcgcaacgataaataagttcgttgatacaaatagactacctcat
ctcctcctttacgggcctccaggtacaggcaaaacttctacgattcttgcattggcacga
cgaatatacggcgcgaagaatgtacggcagatggtactcgaactcaatgcatcggacgac
agaggcatcgatgtggtgcgagagcagatcaaaaccttcgcgagcacgaagcaaatcttt
acgatgaatcctacctctaattcctccacgtcaatcgcagcatataaactcatcattctc
gatgaagcagatgcgatgacatccacggcacaaatggcactgcgacgaattatggagaaa
tatactgccaataccagattttgcattattgcgaattatacacacaagcttagtccagct
ttgctcagtcgttgtacgaggtttagattcagtccattgaaggaggtcgatataagggtc
ctggtggataaggttattgatgaggagaatgtgcagatcacatctgatgccaccgatgca
ctggtaaagttgagcaagggagatatgcgaagagcgctcaatgttcttcaagcctgtcat
gcaagcagcacacctctacatctaaagggtaccccaaaaattgcggagaaagatataaaa
cgagacctaatcactgaaaccacaatctacgaatgtatcgcctcaccacatcccgaagat
atcaccaagattgccgatactcttatgcacacgacagatgtcacatcatgtcttcaaacg
atcaactccctgaaatctacacaaggtctggcattagcagatatcatcacagcactcagc
gagcaattgaccgcgatgcgagtccctgccccagtcatgataacttggctcgatggattg
gcagaagtagaatatagattgagtggcggaggtggagaggcgattcaaacgggagctgtg
gttggtgttgtgagaaatggtgcagaactgtttgagacgttgaaatga
DBGET
integrated database retrieval system
