Pseudochrobactrum algeriensis: KHQ08_02325
Help
Entry
KHQ08_02325 CDS
T07380
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pscq
Pseudochrobactrum algeriensis
Brite
KEGG Orthology (KO) [BR:
pscq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pscq03016
]
KHQ08_02325 (thpR)
Enzymes [BR:
pscq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
KHQ08_02325 (thpR)
Transfer RNA biogenesis [BR:
pscq03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
KHQ08_02325 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QVQ36953
LinkDB
All DBs
Position
complement(76608..77228)
Genome browser
AA seq
206 aa
AA seq
DB search
MPRLFTALEISRDAALSLSLLRGGLIGPKGSVRWIDPENYHITLRFIGDVEGHVADEIVH
ALDRIDRPGFTLQLTGVDVFGTKKPHSIYAGVTPSPELLALQAEMERICQRLRLPPDPRK
FTPHVTLARLKGLPDMQIARYLSERGNFTTLPFNVTRFVLMSSKESTGGGPYVTEEVWPL
RKPSFNAGFEDGASPLHYQFRAGAAE
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgccttttcactgccctcgaaatctcccgggatgctgccctgtcactctcactt
ttgcgtggcgggcttatcggacccaaaggttctgtccgctggattgatccggaaaattat
cacatcacattacggttcatcggcgatgtcgaaggtcatgtggccgatgagatcgttcac
gcgcttgaccggattgaccggcccggctttacgctgcaactgaccggcgtcgatgtgttc
ggcaccaaaaaaccgcatagtatttatgccggtgttacgccatcccctgaactgttggcc
ttgcaggcagagatggaacggatatgccagagattgcggctgccgcctgacccgcgcaaa
tttaccccgcatgtcacattggcacggctcaaaggcctgccggatatgcagattgcccgc
tatctctcggagcggggcaatttcaccacgctgccgttcaacgtcacccgttttgtgctg
atgtcgtcgaaggaatccaccggcggcgggccttatgtcacggaagaagtgtggccgctg
cgcaagccttcatttaatgcgggctttgaagacggagcatcgcctctgcattatcagttt
cgtgccggtgcggcagagtaa
DBGET
integrated database retrieval system
