Pseudochrobactrum algeriensis: KHQ08_02480
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Entry
KHQ08_02480 CDS
T07380
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pscq
Pseudochrobactrum algeriensis
Pathway
pscq03030
DNA replication
pscq03410
Base excision repair
pscq03420
Nucleotide excision repair
pscq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pscq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KHQ08_02480 (polA)
03410 Base excision repair
KHQ08_02480 (polA)
03420 Nucleotide excision repair
KHQ08_02480 (polA)
03440 Homologous recombination
KHQ08_02480 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pscq03032
]
KHQ08_02480 (polA)
03400 DNA repair and recombination proteins [BR:
pscq03400
]
KHQ08_02480 (polA)
Enzymes [BR:
pscq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KHQ08_02480 (polA)
DNA replication proteins [BR:
pscq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KHQ08_02480 (polA)
DNA repair and recombination proteins [BR:
pscq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KHQ08_02480 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KHQ08_02480 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH_2
DNA_polI_exo1
HHH
Transposase_20
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
QVQ36980
LinkDB
All DBs
Position
121528..124470
Genome browser
AA seq
980 aa
AA seq
DB search
MKKGDHLFLVDGSGYIFRAYHALPPLTRKSDGLPVGAVSGFCNMLWKLLKDARNTDVGVV
PTHFAVIFDYSSQTFRKEIYPEYKANRTAPPEDLIPQFGLIRQATHAFNLPCIEKEGYEA
DDIIATYARLAEEAGATVTIVSSDKDLMQLVTEQVSMYDGMKDKQISIPEVIEKWGVPPE
KMIDLQSLTGDSTDNVPGIPGIGPKTAAQLLEEFGDLDTLLARASEIKQNKRRENIIAFA
DQTRISRQLVTLKNDVPLEVDLDGLMLEPQDGPKLIGFLKAMELTTLTRRVAEATDTVAA
EIEPITVETEWGAEARGPDLDRGTDIAEASAPEKAVATVSAESNGQLMRPQTLVEARKAQ
GASAKIDHSAYVGVTDIAVLKDWIDQAIDQGFVAFDTETTSLDPMQAELVGFSLALAAGK
ACYVPLTHKSGQGDLLGGGLIEGQIPLDTALAELKRLLENPSVLIIAQNMKYDWLVMHRL
GIDIARFDDTMLLSYALDAGTGTHGMDALAERWLGHTTIPYKEVAGTGKSAVTFDMVPID
RAIAYGAEDADVTLRLWQVLKPRLAADGMASVYERLERPLVEVLARMEERGVSVDRQILS
RLSGDLAQSAAAIEDEIYTLAGEKMNIASPKQLGDILFGKLGLPGGSKTKTGQWSTSAQV
LEDLAAEGHELPRKIVDWRQLTKLKSTYTDALPGYIHPQTKRVHTSYSMAVTTTGRLSSS
EPNLQNIPVRTAEGRKIRTAFVAPQGKKLISADYSQIELRVLAHVADIAQLKKAFDDGID
IHAMTASEMFGVPVEGMPSEVRRRAKAINFGIIYGISAFGLANQLSIPREEASSYIRTYF
ERFPGIKDYMETTKAAAREQGYVETIFGRRIHYPEIKASNPQVRAFNERAAINAPIQGSA
ADIIRRAMIRMEPALADAKLDAQMLLQVHDELIFEVDDAQVDATIEVVREVMVNAAMPAV
SMTVPLQVDARAAQNWDEAH
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggtgatcatctcttcctcgtcgacggctccggctatattttccgcgcatat
cacgccttgccgccactcacccgcaaatcagacggtttgccggttggtgcggtgtccggt
ttctgcaacatgctgtggaagctcctgaaagatgcgcgcaatacggatgtcggcgtggtg
ccgacccattttgcggttatcttcgattattcgtcacagactttccgtaaggaaatctat
ccggaatataaagccaaccgtactgccccgccggaagatctgatcccgcaattcggcctg
atccgtcaggccactcatgctttcaacctgccttgcatcgaaaaagaaggctatgaagcg
gatgatattatcgccacctatgcccgacttgccgaagaggccggtgcgactgtcaccatc
gtctcatcagacaaagacctgatgcagctcgtgaccgaacaggtctcgatgtatgacggc
atgaaggacaagcagatttcaatccctgaagtgattgaaaaatggggtgtgccgccggag
aagatgatcgacctgcaatcgctgaccggcgattcaaccgataatgtgcctggcattccg
ggtatcgggccaaaaactgccgcacaattgctggaagaattcggtgatctggatacgctg
cttgcccgtgcctccgagattaaacagaataaacgccgcgagaatattatcgcttttgcg
gatcagacccgcatttcgcgtcagttggtgacattgaagaatgatgtgccgctggaggtc
gatcttgatggtctgatgctggaacctcaggacggaccgaagctgatcggcttcctgaag
gcgatggaactgaccacgctgacccgccgtgtggctgaggccacagatacggttgcggcg
gaaattgagccgattactgtggagacagaatggggtgcggaagcacgcggtcccgatctt
gatcgcggcacggatattgctgaagcttcggcaccggaaaaagcggttgcgactgtaagt
gcagaaagcaacggccagctgatgcggccgcagacgctggtggaagcgcgcaaagcgcaa
ggcgcatcagccaaaattgatcattctgcttatgttggcgttaccgatattgcggtgctg
aaagactggatcgatcaggcgattgatcagggttttgtggcttttgacaccgagacaacc
tcgcttgatccgatgcaggcggaactggtcggtttctcgctggctttggcggcaggcaaa
gcctgttatgtaccgctgacgcataaatccggtcagggtgatctgctcggtggcggactg
attgaagggcagattccgctggatacagcgcttgcagagctgaagcgtctgctggaaaat
ccgtctgtgctgattattgcccagaatatgaaatatgactggctggtcatgcatcgtctt
ggcattgatattgcgcgttttgatgacacgatgttgctgtcctatgcgctggatgcaggc
accggcacccatggcatggatgcacttgctgaacgctggcttggtcacacaacaattcct
tataaggaagtagcgggtaccggaaaatcggccgtgacatttgacatggtgccgattgat
cgcgccatcgcctatggtgcggaagatgccgatgtcacattgcgcctgtggcaggtgctg
aaaccgcgtttggctgcggatggcatggcatcggtctatgagcggctggagcgcccgctg
gtcgaagtgctggcgcggatggaggagcgtggggtcagcgttgatcgccaaattctctcc
cgcctttccggcgatctggcgcagtcggctgcggccattgaggatgagatttacacgctt
gccggtgagaagatgaatatcgcttcgccaaagcaactcggcgatattctgttcggaaaa
ctcgggcttccgggtggttccaaaactaaaaccggacaatggtcaacctcggcgcaggtg
ctggaagatctggcggcggaaggccatgagctgccgcgcaagattgtggactggcgccag
ctcaccaagctcaaatccacctatacggatgcactgcccggttatattcatccgcagacc
aagcgggtgcatacctcctattccatggcggtaacgaccacaggacgtttgtcttcgtca
gaaccgaacctgcaaaatattccggtgcgcactgctgaaggccgcaaaatccgcacagcc
tttgtggcgccgcagggtaaaaagctgatctctgctgattatagtcagattgaactgcgt
gtgcttgcacatgtggccgatattgcgcagctgaaaaaagcctttgatgacggtatcgat
attcacgcgatgacggcatctgaaatgttcggcgtacccgtagagggcatgccttctgaa
gtgcgccgccgcgccaaggcgattaatttcggcattatttacggtatttcggcctttggt
cttgccaatcagctgtcgatcccgcgtgaagaggcaagttcctatatccgtacctatttt
gagcgtttccccggtatcaaggattatatggaaacaaccaaggctgctgcgcgtgaacaa
ggctatgtcgagactattttcggccgccgcattcattatccggagatcaaagccagcaat
ccgcaggtgcgggcgtttaatgagcgagctgcgattaacgcgcctattcagggttcggcg
gcagatattatccgccgtgcgatgatccgcatggaaccggcactggcagatgcaaagctc
gatgcgcaaatgctgttgcaggtgcatgacgaactgatcttcgaggttgatgacgcacag
gttgacgcgaccattgaagtggtgcgtgaggtgatggtcaatgcggcaatgccggctgtt
tcgatgactgtgccgttacaggttgatgccagagccgcgcaaaactgggatgaagcgcat
tga
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