Pseudochrobactrum algeriensis: KHQ08_03040
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Entry
KHQ08_03040 CDS
T07380
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pscq
Pseudochrobactrum algeriensis
Pathway
pscq00061
Fatty acid biosynthesis
pscq00071
Fatty acid degradation
pscq01100
Metabolic pathways
pscq01212
Fatty acid metabolism
pscq02024
Quorum sensing
pscq04146
Peroxisome
Module
pscq_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pscq00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
KHQ08_03040
00071 Fatty acid degradation
KHQ08_03040
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KHQ08_03040
09145 Cellular community - prokaryotes
02024 Quorum sensing
KHQ08_03040
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pscq01004
]
KHQ08_03040
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pscq04147
]
KHQ08_03040
Enzymes [BR:
pscq01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
KHQ08_03040
Lipid biosynthesis proteins [BR:
pscq01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
KHQ08_03040
Exosome [BR:
pscq04147
]
Exosomal proteins
Exosomal proteins of breast milk
KHQ08_03040
Exosomal proteins of breast cancer cells
KHQ08_03040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QVQ37072
LinkDB
All DBs
Position
complement(258882..261080)
Genome browser
AA seq
732 aa
AA seq
DB search
MTRSSDGNAKAGATKSAAKKTGTTAAKTAATKPVKESAPKSTAAKAKTVAATKAEPAKTA
VKTSAAPKKSPAKKTATPEATNIAAPTVAEAKKPAKTTTAKPATNTTAGKPAGKTKTAAV
KPAAKAAETKTAPKAGSAKPAAKAAAKVAKAEPEVKIADKAPEPAVVPVAKPVKTASPYD
AKPWLSNYPQGVAHALDPSAYQSITDLILTSCKKYGDRPAFTCMDKSLSYKELDEKSAAL
AAWLQSRGLVKGDRVAVMMPNVLQYPVAITAILRAGLVVVNVNPLYTPRELEHQLNDAGA
KAIIILENFAHTLEKVLPNSSVKHVVVASMGDMHGLKGAIINFVVRRVKKMVPAWNIPAH
NSFKSVLASGAKLTFKPVVIAPDDLAFLQYTGGTTGISKGAMLMHSNILANVEQMRLWLD
VAFQHKGRPEHINYICALPLYHIFALTVNAMMGIQQGARNLLIPNPRDIPAFVKELQKAP
FHIFPGLNTLFNALMENADFRRLDFKPLILTLGGGMAVQRPVAERWEKMTGCLITEGYGL
SETSPVATANVLNATEFSGTIGLPVPGSDVAIRDDDGNDVPLGEVGEVCVRGPQVMKGYW
NRPEETAKAIFPDGFFRTGDMGFMNEGGFTKIVDRKKDMILVSGFNVYPNEIEEVAAEHP
GVVEAAAIGIANEHSGEVVKLFVVRRDPELTEETLKAFCAERLTNYKRPRIIEFRDSLPK
SNVGKILRRELR
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgacacgttcgagtgatgggaatgccaaggccggtgcaacaaaaagcgccgcaaagaaa
accggaaccacggcggccaaaacagccgcaacaaagccggtcaaagaatccgctccgaaa
agcacagcagcgaaagctaagacagtggcagccaccaaggccgaaccggcaaagactgca
gtaaaaacatctgcggcaccgaaaaaatctccggccaaaaaaactgccacaccggaggca
acaaacattgcggctccgacagttgcagaagccaaaaagcctgccaaaacaacaacagca
aagcctgcaaccaataccacggcaggaaagcctgccggcaaaacaaaaactgctgcggta
aaaccggcagcaaaagcagcggaaaccaaaaccgccccgaaagctggtagcgctaagcct
gccgctaaagccgctgccaaggttgcaaaagccgaaccggaagtgaaaattgctgacaag
gcaccggaaccggccgtagtaccagttgccaagccggtaaaaacagccagcccttatgat
gccaaaccatggctcagcaattatccgcaaggggtagcgcatgcgcttgacccgtccgct
tatcaatcgatcaccgatctgatcctcacatcctgcaagaaatatggcgaccgccctgct
ttcacctgcatggacaaatctctgtcctataaagagctggatgaaaaatcggcggctctg
gcagcatggctgcaatcacgcggactggtcaaaggcgaccgcgtggccgtgatgatgccg
aatgtattgcaatatccggttgcgattaccgctattttgcgcgcagggctggtggttgtg
aatgtcaatccgctctataccccacgcgagttggaacatcagctcaatgatgccggtgcc
aaagcgattattattctcgaaaactttgcccatactctggagaaagtcctgccaaattca
tcggtcaagcatgtggttgtcgcctctatgggcgatatgcacgggcttaaaggtgcgatt
atcaatttcgtcgtgcgccgtgttaagaaaatggtgcctgcatggaatattccggcacat
aacagctttaaatctgtcctcgccagcggtgcaaaactgacattcaaaccggtggtgatt
gcaccggatgatctggcttttctgcaatatacaggcggcacgaccggcatttccaaaggt
gccatgctcatgcacagcaatattcttgccaatgtggagcaaatgcgcctgtggctggat
gtggctttccagcataaaggccggccggagcatatcaattatatctgcgcattgccgctc
tatcatatttttgccctgaccgtgaatgcgatgatgggtattcagcagggtgcccgcaat
ctgcttatcccaaatccgcgggatattccggcttttgtgaaagagctgcaaaaagcaccg
tttcatattttcccggggctcaacactttgttcaatgccctgatggaaaatgcagacttc
cgcaggctggatttcaagccgcttatcctcactcttggcggcggcatggcggttcagcgt
cctgttgccgagcgctgggagaagatgacgggctgcctgattactgaaggttacggcctt
tcggaaacctcgccggttgccacggccaatgtgctcaatgcaacggaattttcaggtact
atcggcctgccggtaccgggttctgatgtggcgatccgtgacgatgacggcaatgatgtg
ccgcttggtgaagtgggcgaagtctgtgtgcgtggtccgcaggtcatgaaaggctattgg
aaccggcctgaggaaacagccaaggctattttccctgacggttttttccgcaccggtgat
atgggcttcatgaatgaaggcggtttcaccaaaattgtggaccgcaagaaggatatgatc
cttgtctccggcttcaatgtctatccgaatgagattgaagaagttgcagcggaacatccg
ggcgttgttgaggctgccgctatcggtattgccaatgaacattccggcgaagtggtaaag
ctgtttgtggtgcgccgcgatccggaactaaccgaagagacactgaaagctttctgcgcc
gagcggctgaccaattataagcgtccgcgtataattgaattccgcgacagtctgccgaaa
agcaatgtcggtaaaattctgcgccgcgaattgcgctag
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