Pseudochrobactrum algeriensis: KHQ08_04090
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Entry
KHQ08_04090 CDS
T07380
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pscq
Pseudochrobactrum algeriensis
Pathway
pscq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pscq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KHQ08_04090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pscq02000
]
KHQ08_04090
Transporters [BR:
pscq02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
KHQ08_04090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
DUF3606
BF9343_1606-like_C
Motif
Other DBs
NCBI-ProteinID:
QVQ38300
LinkDB
All DBs
Position
complement(490816..491832)
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AA seq
338 aa
AA seq
DB search
MKKLIAASTMALLTTASYAADKTLTISVYAFAQDDFKEILYKPFEEKCGCKLVVETGNSV
ERLAKMEANKASPVVDMAVVSMADALQASRAGLIDKIDTSKLSNFDKLYDIAKDPNKDGM
SVGYTFYATSIVYRTDKMKIESWADLLKPEYAPHIAFPNVTTNQGPTALYMLEKSLGHNE
ADLKNAIAAVGEKSDDIVTFYVKSSQLVQLMQQEEIWAAPIGRFSWAPFTKLDLPLGWAT
PKEGQTGGMNVMVVAKDSKNRDLALEFMDFWLSTEIQTKIAEKLVDSPANKEVKVSDEIA
GNLTIGEETAKSLQLIPSDVVLDNRDTWLKEWNAKIGQ
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
ctgaagaaactcatcgccgcatccaccatggcgcttctgaccacagcgtcttatgccgct
gacaagaccctgaccatctcggtttacgcttttgcgcaggatgatttcaaagaaatcctc
tacaagccgtttgaagaaaaatgcggctgtaaactggttgttgaaaccggcaacagcgta
gaacgtctggctaaaatggaagccaacaaagccagtcctgttgtggatatggccgttgtt
tccatggccgatgcgctgcaggcttcccgcgccggtctgatcgacaagatcgacacatcg
aagctttccaacttcgacaagctctacgacattgccaaagacccgaacaaagacggcatg
agcgttggttacacattctatgcgacctcgatcgtttaccgcaccgataagatgaaaatc
gagtcctgggcagacctgttgaagcctgaatatgcaccgcatattgctttcccgaatgtg
accaccaatcagggtccgacagcgctttacatgctggaaaaatccctcggccataatgaa
gctgatctgaaaaacgccattgctgccgttggtgaaaaatccgatgacatcgtgactttc
tacgtcaaatcctcgcagctcgtgcagctgatgcagcaggaagaaatctgggcagcacca
atcggtcgtttctcctgggcacctttcacaaagcttgacctgccactcggctgggcaaca
ccgaaagaaggccagaccggcggcatgaatgtgatggtcgttgccaaggattccaagaac
cgtgatctggctctggaattcatggatttctggctctccactgaaattcagaccaagatt
gctgaaaagctggtcgacagccctgccaataaagaagtcaaggtttccgacgaaattgcc
ggcaacctcaccattggcgaagaaaccgccaaaagccttcagctcattccgtccgatgtc
gttctcgacaatcgcgacacatggctgaaagaatggaacgccaaaatcggccagtaa
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