Pseudochrobactrum algeriensis: KHQ08_06580
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Entry
KHQ08_06580 CDS
T07380
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pscq
Pseudochrobactrum algeriensis
Brite
KEGG Orthology (KO) [BR:
pscq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pscq03400
]
KHQ08_06580 (radA)
DNA repair and recombination proteins [BR:
pscq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KHQ08_06580 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
AAA_16
DUF7125
AAA_30
DnaB_C
AAA_22
SLFN-g3_helicase
AAA
Lon_C
AAA_24
nSTAND_NTPase5
AAA_19
nSTAND3
AAA_5
AAA_14
HepII_C
NTPase_1
Elong_Iki1
NACHT
MeaB
Fer4_NifH
RecA_N
CbiA
ATPase_2
Zeta_toxin
NAT10_TcmA_helicase
GvpD_P-loop
NPHP3_N
CobU
T2SSE
MCM
IstB_IS21
HypA
DAP3
Motif
Other DBs
NCBI-ProteinID:
QVQ37689
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All DBs
Position
complement(1068203..1069606)
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AA seq
467 aa
AA seq
DB search
MAKNRIQFICQNCGATHSRWAGKCDGCGEWNTLVEEGTSGGIGSGPGKMAMRKGRAVALT
TLSGEIEDAPRIQSGIGELDRVTGGGFVRGSALLVGGDPGIGKSTLLTQAAAALARRGNR
IIYVSGEEAVAQIRLRAQRLHAADTSVELAAETNVEDILATIDTKPRPDLVIIDSIQTLW
TDAADSAPGSVTQVRAGAQAMIRYAKSTGAAVVLVGHVTKEGQIAGPRVVEHMVDGVLYF
EGEGGHHYRILRTVKNRFGPTDEIGVFEMSDKGLREVSNPSELFLGERNEKAPGAAVFAG
MEGTRPVLVEIQALVAPSTLGTPRRAVVGWDNSRLSMTLAVLEAHCGVRFGQHDVYLNVA
GGYRISEPAADMAVAAALVSSLAGIPLPANSVYFGEVSLSGAVRAVAHAAQRIKEAEKLG
FKQAVLPVGGGELSRPHNFTLTETGSLPDLVARIAASGPGKNAQNRD
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaaaaccggattcagttcatctgccagaattgcggtgccacgcattcgcgctgg
gcaggcaaatgcgacggctgcggcgagtggaacacacttgtcgaagaaggcacatccggc
ggcatcggctcgggtccgggcaaaatggcgatgcgcaaaggccgtgccgttgcgctcacc
accctctccggtgagattgaagatgcaccgcgtatccagtccggtatcggtgagctagat
cgtgtgacaggtggcggctttgtccgcggttccgcactgctggtcggcggtgacccgggc
attggcaaatcaaccttacttacacaagccgctgcggctttagctcgtcgcggcaaccgc
atcatctatgtatccggtgaagaagcggtggcacagattcgtttgcgcgctcagagattg
catgccgcagacacatctgtggaactggcagcagaaaccaatgtcgaggatattctcgcg
accattgataccaaaccacgccctgatctggtgattattgattccatccagaccctgtgg
acagatgcggctgacagcgcaccgggttcggtgacgcaggtacgtgccggtgcgcaggcg
atgatccgctacgccaagtcaaccggcgcagccgtggtgctggtcggccatgtgaccaaa
gaaggccagatcgcaggcccgcgtgtggttgagcatatggttgacggcgttttgtatttt
gaaggcgaaggcggccatcactaccgcatcctgcgcacagtcaaaaaccgctttggtccg
actgatgaaatcggcgtttttgaaatgtccgataaaggtttgcgggaagtctccaacccg
tccgaactgtttcttggcgagcgcaatgaaaaggctccgggagctgcggtatttgccggt
atggaaggtacccgccctgttctcgtggaaattcaggcgcttgttgcaccatccacactc
ggcactccgcgtcgcgccgttgtcggctgggataacagccgtctatccatgacccttgcc
gtgctggaagcccattgcggtgtgcgcttcggccagcatgatgtttatctcaatgtggct
ggtggttatcgtatttccgagcctgctgcggatatggctgtagcggcagcgcttgtctcg
tcgcttgccggtattccgctgcctgcaaacagcgtttattttggtgaagtcagtctttcc
ggtgcagtacgtgccgtagctcatgctgcgcaacgcattaaagaggcggagaaactcggc
tttaaacaggctgttctgcctgtgggcgggggtgagttgtcacgcccacacaatttcacg
ctgacagaaaccggctccctgcccgatctggtggcacgaattgctgcttccggccccgga
aagaatgcgcagaaccgagattag
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