Pseudochrobactrum algeriensis: KHQ08_07290
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Entry
KHQ08_07290 CDS
T07380
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
pscq
Pseudochrobactrum algeriensis
Pathway
pscq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pscq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
KHQ08_07290 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pscq01007
]
KHQ08_07290 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pscq03016
]
KHQ08_07290 (aspS)
03029 Mitochondrial biogenesis [BR:
pscq03029
]
KHQ08_07290 (aspS)
Enzymes [BR:
pscq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
KHQ08_07290 (aspS)
Amino acid related enzymes [BR:
pscq01007
]
Aminoacyl-tRNA synthetase
Class II (A)
KHQ08_07290 (aspS)
Transfer RNA biogenesis [BR:
pscq03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
KHQ08_07290 (aspS)
Prokaryotic type
Other AARSs
KHQ08_07290 (aspS)
Mitochondrial biogenesis [BR:
pscq03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
KHQ08_07290 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
QVQ37813
LinkDB
All DBs
Position
1185888..1187675
Genome browser
AA seq
595 aa
AA seq
DB search
MHRYRSHTCEALRKSDVGQTVRLSGWVHRVRDHGGILFIDIRDHYGLTQIVADPESPAFK
VAETVRGEWVIRVDGEVTARADEAVNPNLPTGEIEVVAKEIEVLAAAKELPLPVFGEPDY
PEDIRLKYRFLDLRRDTLHKNIMKRTKIISSMRRHMNEIGFNEFTTPILTASSPEGARDF
LVPSRIHEGQFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE
MSFVTQEEVWETMEPVMRGIFEEFAEGKPVTQQFRRIAYDDAIRTYGSDKPDLRNPIEMQ
AVTGHFAGSGFKVFANMIANDPKVEVWAIPAKTGGSRAFCDRMNSWAQGEGQPGLGYIFW
RKEGDKLEGAGPIAKNIGEERVEAIRTQMGLEDGDACFFVAGLPSKFYKFAGDARNRAGD
ELNLTDRDRFELAWIIDFPFYEWDEDNKKLDFAHNPFSMPQGGLEALETQDPLSLKAYQY
DLVCNGFEIASGSIRNQLPEVMVKAFELVGLSQQDVEDRFGGLYRAFQYGAPPHGGMAAG
IDRVVMLLVGAKNLRDISLFPMNQQAVDLLMGAPAEVTPAQLRDLHIRVNPIKKD
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgttaccgcagccatacctgcgaagccctccgcaagtcggatgtcggccagaca
gttcgtctttccggctgggttcatcgtgtccgcgatcacggcggtattctctttatcgat
attcgtgaccactatggtttgacccagatcgttgctgatccggaaagcccggcatttaaa
gttgctgaaaccgttcgcggtgaatgggtgatccgcgttgacggtgaagtaaccgcccgt
gctgatgaggctgtaaacccgaatttgcctaccggtgaaattgaagtggttgccaaagag
attgaagttctggctgctgccaaggaactgcctctgccggtattcggtgagccggactat
ccggaagatatccgtctgaaataccgcttcctcgatctgcgccgcgacacgctgcataaa
aacatcatgaagcgcaccaagattatttcttcgatgcgccgtcatatgaacgagatcggc
ttcaacgaattcactacaccgatcctgaccgcttcttcgcctgaaggcgcgcgcgacttc
ctcgtgccgagccgtattcacgaaggtcagttctatgcgctgccacaggcacctcagcag
tataagcagctgttgatggtggctggtttcgaccgctacttccagattgcaccttgcttc
cgcgatgaagatccgcgtgcagatcgtctgccgggcgaattctaccagctcgatctcgaa
atgagctttgtcactcaggaagaagtctgggagacaatggaaccggttatgcgcggcatt
ttcgaagaatttgctgaaggcaagccggtaacccagcagttccgtcgtatcgcttatgat
gatgcgatccgcacctatggttcggataagcctgatctgcgtaacccgattgaaatgcag
gctgtgaccggtcactttgccggttccggtttcaaagtgttcgcaaacatgatcgctaat
gatcctaaggttgaagtatgggctatccctgcgaaaaccggtggttcgcgcgctttctgc
gaccgcatgaattcatgggcgcagggtgaaggtcagccgggtctcggttatatcttctgg
cgtaaagaaggcgacaagctggaaggcgctggcccgattgccaagaatatcggtgaagaa
cgcgttgaagcgatccgtacccagatgggtctggaagatggcgatgcctgcttcttcgtg
gctggtctgccgtcgaaattctacaaatttgccggtgatgcccgtaaccgtgccggtgat
gagctgaaccttaccgatcgtgatcgttttgaactggcctggatcatcgacttcccgttc
tatgaatgggacgaagataacaagaagctcgacttcgcgcataacccgttctccatgccg
cagggtggtctggaagcactggaaacgcaggatccgttgtcgctcaaagcctatcagtac
gatctggtttgtaacggttttgaaatcgcatccggttcgatccgtaaccagctgccggaa
gttatggtcaaagcctttgaactggttggtttgagccagcaggatgtggaagatcgtttc
ggcggcctctaccgtgcattccagtatggtgcgcctccgcatggcggtatggctgccggt
attgaccgcgtggttatgctgctcgttggtgcgaaaaacctgcgcgatatctcgctgttc
ccgatgaaccagcaggctgttgatctgctgatgggcgcaccggcagaagttacgccggct
cagctgcgtgatctgcatatccgcgtgaacccgatcaaaaaagactga
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