Pseudochrobactrum algeriensis: KHQ08_08325
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Entry
KHQ08_08325 CDS
T07380
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pscq
Pseudochrobactrum algeriensis
Brite
KEGG Orthology (KO) [BR:
pscq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pscq01002
]
KHQ08_08325
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pscq01011
]
KHQ08_08325
Peptidases and inhibitors [BR:
pscq01002
]
Cysteine peptidases
Family C82
KHQ08_08325
Peptidoglycan biosynthesis and degradation proteins [BR:
pscq01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
KHQ08_08325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QVQ38396
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Position
1408486..1410519
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AA seq
677 aa
AA seq
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MRNAFFTTAITAVTGISVLAPVQSANAASNLMDLFREKREAREMQRQQIQQPVQQVPQAT
GAARTAKPAGAAQPAKSVTAPVKAVSVKGPQIYDYKPEKLVKVDFTAVDMQLTAAISEDE
GGLLPSALYAEAVGFISTLPQRADGLINPVAKKTTAQSGTALVTAVLDAMKTTDVKAEQS
VAEAIVSFYATEQALLWSDGLNVSSRAEDVLALFERAEEEGLVPAEYAVKVPDLTFDAAQ
KDQRIREMAAFEINLTARALRYALDAGEGRVIANRLSGFHDLPRNRIKPELVLKTLEDAS
DPVEVLSSFNPQNSYYQKLKAQLASMKPETKNTVRIAADTLIKPGQDNAELPKILALIVQ
KAPAGYLNSYQEMFDRHKDGTLYDPELVAAVKDYQKLMGKVPDGVIGRATIAGLQGETSS
VKRERILYAMERLRWLPRDFGQRYVFVNQPAYRAQYFDQGKEQLAMDVVIGSPRNQTHFF
YDTISTVVFNPSWGVPRSIVMNEMMPRILADSGYLDRNNYEVIAGGKRVASSSVNWSAVA
QGKAHVGVRQKPGPSNALGELKILFPNSHDIYLHDTPSKAAFKRDMRAISHGCIRLADPR
AMASAVMSTGEENLTKYFGKNERGIKVPSGVPIYLTYFTAWPDEASGKIRYYDDVYARDE
GLAKAFQKTEQSRVAAM
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatgcattttttacaacggctatcaccgctgttaccggtatttctgtgctggct
ccggtgcagtcagccaatgcagccagcaatctgatggatttgttccgtgagaagcgcgag
gcgcgtgaaatgcagcgccagcaaatacagcagcctgttcagcaggtgccgcaagccaca
ggcgcagcgcgcactgccaagcctgccggtgccgcgcagcctgccaaaagcgtaactgcg
cctgttaaagctgtttcggttaaaggcccgcagatttacgattacaagccagaaaagctg
gtgaaagtggatttcaccgcggttgatatgcaactgaccgcagccatttctgaggatgag
ggtggcttgctgccgtccgcactttatgctgaagctgtgggttttatcagtactctgccg
cagcgtgccgacggcttgattaatccggttgccaaaaagaccacggcgcaatcaggcaca
gcgctggtgactgcagttctggatgcaatgaaaaccacggatgttaaggctgagcagtct
gttgccgaggctattgtatccttctatgcaaccgagcaggcacttctgtggtctgatggt
ctgaatgtttcttcccgtgctgaagatgtgctggcgctgtttgaacgggcagaagaagag
gggctggttcctgctgaatatgcggtgaaagtgcctgatctgacctttgacgctgcgcaa
aaagatcagcgcatccgtgaaatggcggcatttgaaatcaacctgaccgcacgggcattg
cgctatgcgctggatgccggtgagggacgggtgattgccaatcgtctgagcggcttccat
gatctgccgcgcaatcgcataaagccggaactggtgctgaaaactctggaagatgcatct
gatccggtagaagtgcttagcagtttcaatccgcaaaacagctattatcagaagctgaaa
gcgcagctggcttcgatgaagccggaaacaaaaaacactgtgcgtattgccgcggatacg
ctgattaaaccaggtcaggacaatgcggaactgcctaaaattctggcgctgatcgtacaa
aaagcaccagccggttatctgaatagctatcaggagatgtttgaccgtcataaagacggg
acactttatgatcctgaactggtggctgcggttaaagactatcagaagctgatgggcaag
gtgccggatggtgtgattggtcgcgcgaccatcgcaggcttgcagggcgaaacatcttcg
gtcaaacgcgagcgtattctctatgcgatggaacgcctgcgctggctgccgcgtgacttc
ggtcagcgctatgtcttcgtcaatcaacctgcctatcgtgcacaatatttcgatcagggc
aaagagcagctggcaatggatgtggtgatcggttcaccgcgcaaccagacgcatttcttc
tatgacacaatcagcaccgtggtatttaacccgtcatggggcgtgccgcgttctattgta
atgaatgaaatgatgccgcgtattctggctgattccggctatcttgatcgcaataattat
gaagtgattgccggtggcaagcgcgtggcttcatcctcggtcaactggtctgcggttgcg
caaggtaaagcgcatgtcggcgtgcgccagaagccggggccgagcaatgcgctgggcgag
ttgaagattctgttcccgaacagccacgatatctatctgcatgacacgccgtcaaaagca
gcgttcaagcgggatatgcgggcgatcagccatggctgtatccgtctggccgatccacgt
gccatggcttctgcggtcatgagtaccggtgaagaaaatctgaccaaatatttcggcaaa
aatgagcgcggtatcaaagtgccgtccggtgtgccgatttacctgacctatttcaccgca
tggccggatgaggcaagtggtaaaatccgttattatgacgatgtttatgcgcgtgatgaa
ggtctggcaaaggctttccaaaaaacggaacagagtcgggttgcggcaatgtaa
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