Pseudochrobactrum algeriensis: KHQ08_08990
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Entry
KHQ08_08990 CDS
T07380
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pscq
Pseudochrobactrum algeriensis
Brite
KEGG Orthology (KO) [BR:
pscq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pscq01011
]
KHQ08_08990
Enzymes [BR:
pscq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
KHQ08_08990
Peptidoglycan biosynthesis and degradation proteins [BR:
pscq01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
KHQ08_08990
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Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
NPBW
PAS_8
Motif
Other DBs
NCBI-ProteinID:
QVQ38098
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Position
1556958..1558178
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AA seq
406 aa
AA seq
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MNKSGGRMLHSSRVKHILCLGVVGLLVTACASPQPEVKKKKRSKEYFAESVYGVKASPRV
ANGKKIPRGGGRNQVGKPYKVKDKWYKPKEDPNYVKVGRASWYGSAFHGRLTANGEVYDM
THLTAAHPTMPLPSYARVTNTANGSSVIVRVNDRGPYSNERIIDMSEKAAEMLDYKHHGT
ANVKVEYVGRAPLHGQDDAFLLASYRPAGGDNIGQPATGVMMAMNGPTPTSAPNRTEQGV
ASAFDQISAQPELPFGYADGAASVLPSVIPVPLDKPYGLYASAQNDILVSAYAGNRIAQA
NEGIYSKVLMPDATSAEWRNAQAAKYLQAGAEQGEFVDLGTFSSKDEADRIASALKNIGT
ISSSMTPQVQGDLYSLTAKSRSGNNDALLQAAWAAGANDAFVVRAE
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagagcgggggccggatgctgcattcttctcgggtgaaacatattctttgtctt
ggtgtggtgggattgctggttacagcctgtgcttctccccagccggaagtgaaaaagaaa
aagcgctccaaggaatattttgcagaatccgtctatggcgtaaaagccagcccgcgtgtt
gccaatggcaagaaaatcccgcgcggcggcggccgcaatcaggtcggcaagccttataaa
gtcaaagacaagtggtataagccgaaggaagacccgaattatgtgaaggtcggccgcgct
tcctggtatggttcggcatttcatggccgtctgaccgccaatggcgaagtctatgacatg
acccatttgacagccgcgcatccgaccatgccgctgcctagctatgcccgcgtcaccaat
accgccaatggcagttcagttattgtacgcgtgaatgaccgcggcccttattccaacgag
cgtatcattgatatgtcggaaaaagcggctgaaatgctggattacaagcatcacggcacc
gcgaatgttaaagtcgaatatgttggccgtgcgcctttgcatggtcaggatgatgcattc
ctgctcgcctcttaccgccctgcgggtggtgacaatattggccagcctgcgacaggcgtg
atgatggccatgaacggcccgacgccgacatctgcaccaaaccgtacagaacagggtgta
gccagcgcatttgaccagatttccgcacagccggagctgcctttcggttatgctgacggc
gctgcgtctgtgctgccatctgttattcctgtaccgctggataagccatatggtctctat
gcatctgcacagaatgatattctggtcagcgcttatgccggaaaccgcatcgctcaggcc
aatgagggtatctattccaaggtgctgatgccggatgcaacctctgccgaatggcgcaat
gcgcaggctgcaaaatatctgcaggccggtgcggagcagggtgagtttgttgatctcggt
actttcagcagcaaggatgaggcagatcgtattgcctctgcacttaaaaatatcggaaca
atcagcagcagcatgacaccgcaggtacagggcgatttatatagcctgactgcaaaatca
cgcagcggcaacaatgacgcgctgttgcaggccgcatgggctgccggtgcaaatgatgct
tttgtggtgcgtgccgagtaa
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